RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 MYO1EQ12965 1108 aa13.86□□□□□ -0.19
SCN8A-209ENST00000627620 BAG5Q9UL15 447 aa13.86□□□□□ -0.19
SCN8A-209ENST00000627620 SEC31AO94979 1220 aaKnown RBP13.86□□□□□ -0.19
SCN8A-209ENST00000627620 ARHGEF6Q15052 776 aa13.86□□□□□ -0.19
SCN8A-209ENST00000627620 CIAPIN1Q6FI81 312 aa13.86□□□□□ -0.19
SCN8A-209ENST00000627620 DNAAF3Q8N9W5 541 aa13.86□□□□□ -0.19
SCN8A-209ENST00000627620 KCTD6Q8NC69 237 aa13.86□□□□□ -0.19
SCN8A-209ENST00000627620 CALN1Q9BXU9 219 aa13.86□□□□□ -0.19
SCN8A-209ENST00000627620 LRRC4Q9HBW1 653 aa13.86□□□□□ -0.19
SCN8A-209ENST00000627620 SPTLC3Q9NUV7 552 aa13.86□□□□□ -0.19
SCN8A-209ENST00000627620 CPSF2Q9P2I0 782 aaKnown RBP13.86□□□□□ -0.19
SCN8A-209ENST00000627620 PALLDQ8WX93 1383 aa13.86□□□□□ -0.19
SCN8A-209ENST00000627620 SART1O43290 800 aaKnown RBP13.86□□□□□ -0.19
SCN8A-209ENST00000627620 SUN1O94901 812 aa13.86□□□□□ -0.19
SCN8A-209ENST00000627620 ARL6IP4Q66PJ3 421 aaKnown RBP13.86□□□□□ -0.19
SCN8A-209ENST00000627620 VSTM4Q8IW00 320 aa13.86□□□□□ -0.19
SCN8A-209ENST00000627620 RYBPQ8N488 228 aaPredicted RBP13.86□□□□□ -0.19
SCN8A-209ENST00000627620 STRBPQ96SI9 672 aaKnown RBP13.86□□□□□ -0.19
SCN8A-209ENST00000627620 SESN3P58005 492 aa13.85□□□□□ -0.19
SCN8A-209ENST00000627620 DARS2Q6PI48 645 aaKnown RBP13.85□□□□□ -0.19
SCN8A-209ENST00000627620 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.85□□□□□ -0.19
SCN8A-209ENST00000627620 NDST4Q9H3R1 872 aa13.85□□□□□ -0.19
SCN8A-209ENST00000627620 DGKHQ86XP1 1220 aa13.85□□□□□ -0.19
SCN8A-209ENST00000627620 BRIP1Q9BX63 1249 aa13.85□□□□□ -0.19
SCN8A-209ENST00000627620 SLC12A6Q9UHW9 1150 aa13.85□□□□□ -0.19
SCN8A-209ENST00000627620 MAGED2Q9UNF1 606 aaPredicted RBP13.85□□□□□ -0.19
SCN8A-209ENST00000627620 PHLPP2Q6ZVD8 1323 aa13.85□□□□□ -0.19
SCN8A-209ENST00000627620 ZNF521Q96K83 1311 aa13.85□□□□□ -0.19
SCN8A-209ENST00000627620 GOLGA8IPA6NC78 632 aa13.85□□□□□ -0.19
SCN8A-209ENST00000627620 GOLGA8JA6NMD2 632 aa13.85□□□□□ -0.19
SCN8A-209ENST00000627620 MSH2P43246 934 aa13.85□□□□□ -0.19
SCN8A-209ENST00000627620 IREB2P48200 963 aaKnown RBP13.85□□□□□ -0.19
SCN8A-209ENST00000627620 ARPP19P56211 112 aa13.85□□□□□ -0.19
SCN8A-209ENST00000627620 BASP1P80723 227 aaKnown RBP13.85□□□□□ -0.19
SCN8A-209ENST00000627620 DALRD3Q5D0E6 543 aaKnown RBP13.85□□□□□ -0.19
SCN8A-209ENST00000627620 C10orf76Q5T2E6 689 aa13.85□□□□□ -0.19
SCN8A-209ENST00000627620 TRIM68Q6AZZ1 485 aa13.85□□□□□ -0.19
SCN8A-209ENST00000627620 ARHGEF18Q6ZSZ5 1173 aa13.85□□□□□ -0.19
SCN8A-209ENST00000627620 PBKQ96KB5 322 aa13.85□□□□□ -0.19
SCN8A-209ENST00000627620 ANGPTL3Q9Y5C1 460 aa13.85□□□□□ -0.19
SCN8A-209ENST00000627620 MAGI3Q5TCQ9 1506 aa13.85□□□□□ -0.19
SCN8A-209ENST00000627620 ZNF233A6NK53 670 aa13.85□□□□□ -0.19
SCN8A-209ENST00000627620 CLTAP09496 248 aa13.85□□□□□ -0.19
SCN8A-209ENST00000627620 SRGAP2CP0DJJ0 459 aa13.85□□□□□ -0.19
SCN8A-209ENST00000627620 RAB44Q7Z6P3 723 aaPredicted RBP13.85□□□□□ -0.19
SCN8A-209ENST00000627620 PCDHA13Q9Y5I0 950 aa13.85□□□□□ -0.19
SCN8A-209ENST00000627620 RPAP1Q9BWH6 1393 aaPredicted RBP13.85□□□□□ -0.19
SCN8A-209ENST00000627620 SH3RF3Q8TEJ3 882 aaPredicted RBP13.85□□□□□ -0.19
SCN8A-209ENST00000627620 GBP5Q96PP8 586 aa13.85□□□□□ -0.19
SCN8A-209ENST00000627620 ZNF341Q9BYN7 854 aa13.85□□□□□ -0.19
SCN8A-209ENST00000627620 BHMT2Q9H2M3 363 aa13.85□□□□□ -0.19
SCN8A-209ENST00000627620 MYO5CQ9NQX4 1742 aa13.84□□□□□ -0.19
SCN8A-209ENST00000627620 LIG3P49916 1009 aa13.84□□□□□ -0.19
SCN8A-209ENST00000627620 HLFQ16534 295 aa13.84□□□□□ -0.19
SCN8A-209ENST00000627620 TMEM179Q6ZVK1 233 aa13.84□□□□□ -0.19
SCN8A-209ENST00000627620 RTKN2Q8IZC4 609 aa13.84□□□□□ -0.19
SCN8A-209ENST00000627620 HVCN1Q96D96 273 aa13.84□□□□□ -0.19
SCN8A-209ENST00000627620 SH3GLB2Q9NR46 395 aa13.84□□□□□ -0.19
SCN8A-209ENST00000627620 UBN2Q6ZU65 1347 aa13.84□□□□□ -0.19
SCN8A-209ENST00000627620 ARAP3Q8WWN8 1544 aa13.84□□□□□ -0.19
SCN8A-209ENST00000627620 HOXA7P31268 230 aaPredicted RBP13.84□□□□□ -0.19
SCN8A-209ENST00000627620 SERPINB6P35237 376 aa13.84□□□□□ -0.19
SCN8A-209ENST00000627620 LRRC63Q05C16 580 aa13.84□□□□□ -0.19
SCN8A-209ENST00000627620 TMED2Q15363 201 aa13.84□□□□□ -0.19
SCN8A-209ENST00000627620 TCP11X2Q5H9J9 407 aa13.84□□□□□ -0.19
SCN8A-209ENST00000627620 TMCO4Q5TGY1 634 aa13.84□□□□□ -0.19
SCN8A-209ENST00000627620 SCARA5Q6ZMJ2 495 aa13.84□□□□□ -0.19
SCN8A-209ENST00000627620 SIX6OS1Q8N1H7 587 aa13.84□□□□□ -0.19
SCN8A-209ENST00000627620 HEXIM2Q96MH2 286 aaKnown RBP13.84□□□□□ -0.19
SCN8A-209ENST00000627620 MSTO1Q9BUK6 570 aa13.84□□□□□ -0.19
SCN8A-209ENST00000627620 CPSF3Q9UKF6 684 aaKnown RBP13.84□□□□□ -0.19
SCN8A-209ENST00000627620 MKRN3Q13064 507 aaKnown RBP13.84□□□□□ -0.19
SCN8A-209ENST00000627620 ALCAMQ13740 583 aa13.84□□□□□ -0.19
SCN8A-209ENST00000627620 KIAA1841Q6NSI8 718 aa13.84□□□□□ -0.19
SCN8A-209ENST00000627620 CLEC4GQ6UXB4 293 aa13.84□□□□□ -0.19
SCN8A-209ENST00000627620 MYLK4Q86YV6 388 aaPredicted RBP13.84□□□□□ -0.19
SCN8A-209ENST00000627620 RNF14Q9UBS8 474 aa13.84□□□□□ -0.19
SCN8A-209ENST00000627620 TTC37Q6PGP7 1564 aa13.84□□□□□ -0.19
SCN8A-209ENST00000627620 MBD5Q9P267 1494 aa13.84□□□□□ -0.19
SCN8A-209ENST00000627620 LRRD1A4D1F6 860 aa13.84□□□□□ -0.19
SCN8A-209ENST00000627620 PRPSAP2O60256 369 aa13.84□□□□□ -0.19
SCN8A-209ENST00000627620 NDUFA10O95299 355 aa13.84□□□□□ -0.19
SCN8A-209ENST00000627620 DHX9Q08211 1270 aaKnown RBP13.84□□□□□ -0.19
SCN8A-209ENST00000627620 SURF1Q15526 300 aa13.84□□□□□ -0.19
SCN8A-209ENST00000627620 ATP6V1E2Q96A05 226 aa13.84□□□□□ -0.19
SCN8A-209ENST00000627620 MASTLQ96GX5 879 aa13.84□□□□□ -0.19
SCN8A-209ENST00000627620 RPF1Q9H9Y2 349 aaKnown RBP13.84□□□□□ -0.19
SCN8A-209ENST00000627620 SLC4A1P02730 911 aa13.83□□□□□ -0.19
SCN8A-209ENST00000627620 HSPA6P17066 643 aa13.83□□□□□ -0.19
SCN8A-209ENST00000627620 MARK3P27448 753 aa13.83□□□□□ -0.19
SCN8A-209ENST00000627620 CCT5P48643 541 aa13.83□□□□□ -0.19
SCN8A-209ENST00000627620 CCDC197Q8NCU1 140 aa13.83□□□□□ -0.19
SCN8A-209ENST00000627620 ATF5Q9Y2D1 282 aaPredicted RBP13.83□□□□□ -0.19
SCN8A-209ENST00000627620 CDK12Q9NYV4 1490 aaPredicted RBP13.83□□□□□ -0.19
SCN8A-209ENST00000627620 K7ERI5 159 aa13.83□□□□□ -0.2
SCN8A-209ENST00000627620 GH2P01242 217 aa13.83□□□□□ -0.2
SCN8A-209ENST00000627620 MMP10P09238 476 aa13.83□□□□□ -0.2
SCN8A-209ENST00000627620 RNF207Q6ZRF8 634 aa13.83□□□□□ -0.2
SCN8A-209ENST00000627620 LRGUKQ96M69 825 aa13.83□□□□□ -0.2
SCN8A-209ENST00000627620 KIF9Q9HAQ2 790 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms