RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 ARP10275 920 aa16.66■□□□□ 0.26
PNKP-221ENST00000627317 RAG1P15918 1043 aa16.66■□□□□ 0.26
PNKP-221ENST00000627317 CYP3A7P24462 503 aa16.66■□□□□ 0.26
PNKP-221ENST00000627317 TRAPPC10P48553 1259 aa16.66■□□□□ 0.26
PNKP-221ENST00000627317 SP2Q02086 613 aa16.66■□□□□ 0.26
PNKP-221ENST00000627317 PPP4R3AQ6IN85 833 aa16.66■□□□□ 0.26
PNKP-221ENST00000627317 DHX37Q8IY37 1157 aaKnown RBP16.66■□□□□ 0.26
PNKP-221ENST00000627317 GIMAP8Q8ND71 665 aaPredicted RBP16.66■□□□□ 0.26
PNKP-221ENST00000627317 SENP7Q9BQF6 1050 aa16.66■□□□□ 0.26
PNKP-221ENST00000627317 SDF4Q9BRK5 362 aa16.66■□□□□ 0.26
PNKP-221ENST00000627317 TRPV6Q9H1D0 765 aa16.66■□□□□ 0.26
PNKP-221ENST00000627317 AGO4Q9HCK5 861 aaKnown RBP16.66■□□□□ 0.26
PNKP-221ENST00000627317 IPO5O00410 1097 aaKnown RBP16.65■□□□□ 0.26
PNKP-221ENST00000627317 MYL3P08590 195 aa16.65■□□□□ 0.26
PNKP-221ENST00000627317 KCNA2P16389 499 aa16.65■□□□□ 0.26
PNKP-221ENST00000627317 LAMC2Q13753 1193 aa16.65■□□□□ 0.26
PNKP-221ENST00000627317 SHHQ15465 462 aa16.65■□□□□ 0.26
PNKP-221ENST00000627317 Q4G0T1 1027 aa16.65■□□□□ 0.26
PNKP-221ENST00000627317 BRDTQ58F21 947 aaPredicted RBP16.65■□□□□ 0.26
PNKP-221ENST00000627317 TTC38Q5R3I4 469 aa16.65■□□□□ 0.26
PNKP-221ENST00000627317 CELF3Q5SZQ8 465 aaKnown RBP16.65■□□□□ 0.26
PNKP-221ENST00000627317 PPTC7Q8NI37 304 aa16.65■□□□□ 0.26
PNKP-221ENST00000627317 KAT2BQ92831 832 aa16.65■□□□□ 0.26
PNKP-221ENST00000627317 LENG9Q96B70 501 aa16.65■□□□□ 0.26
PNKP-221ENST00000627317 MBOAT7Q96N66 472 aa16.65■□□□□ 0.26
PNKP-221ENST00000627317 ZNF577Q9BSK1 485 aa16.65■□□□□ 0.26
PNKP-221ENST00000627317 MLXIPQ9HAP2 919 aa16.65■□□□□ 0.26
PNKP-221ENST00000627317 TCEAL9Q9UHQ7 104 aa16.65■□□□□ 0.26
PNKP-221ENST00000627317 RBM19Q9Y4C8 960 aaKnown RBP16.65■□□□□ 0.26
PNKP-221ENST00000627317 SLC37A4O43826 429 aa16.64■□□□□ 0.25
PNKP-221ENST00000627317 MARCH6O60337 910 aa16.64■□□□□ 0.25
PNKP-221ENST00000627317 NEMFO60524 1076 aa16.64■□□□□ 0.25
PNKP-221ENST00000627317 FPGSQ05932 587 aa16.64■□□□□ 0.25
PNKP-221ENST00000627317 RESTQ13127 1097 aa16.64■□□□□ 0.25
PNKP-221ENST00000627317 NBPF20Q3BBV1 942 aa16.64■□□□□ 0.25
PNKP-221ENST00000627317 MYSM1Q5VVJ2 828 aa16.64■□□□□ 0.25
PNKP-221ENST00000627317 MFSD5Q6N075 450 aa16.64■□□□□ 0.25
PNKP-221ENST00000627317 GPR153Q6NV75 609 aa16.64■□□□□ 0.25
PNKP-221ENST00000627317 NFRKBQ6P4R8 1299 aa16.64■□□□□ 0.25
PNKP-221ENST00000627317 METTL7BQ6UX53 244 aa16.64■□□□□ 0.25
PNKP-221ENST00000627317 CYFIP1Q7L576 1253 aa16.64■□□□□ 0.25
PNKP-221ENST00000627317 SPATA33Q96N06 139 aa16.64■□□□□ 0.25
PNKP-221ENST00000627317 UIMC1Q96RL1 719 aa16.64■□□□□ 0.25
PNKP-221ENST00000627317 CTAGE1Q96RT6 745 aa16.64■□□□□ 0.25
PNKP-221ENST00000627317 NOC4LQ9BVI4 516 aaKnown RBP16.64■□□□□ 0.25
PNKP-221ENST00000627317 UMODL1Q5DID0 1318 aa16.64■□□□□ 0.25
PNKP-221ENST00000627317 NOP56O00567 594 aaKnown RBP16.63■□□□□ 0.25
PNKP-221ENST00000627317 WNT7AO00755 349 aa16.63■□□□□ 0.25
PNKP-221ENST00000627317 TLR3O15455 904 aaKnown RBP16.63■□□□□ 0.25
PNKP-221ENST00000627317 MSH4O15457 936 aa16.63■□□□□ 0.25
PNKP-221ENST00000627317 ATP9AO75110 1047 aa16.63■□□□□ 0.25
PNKP-221ENST00000627317 F2P00734 622 aa16.63■□□□□ 0.25
PNKP-221ENST00000627317 MCM7P33993 719 aa16.63■□□□□ 0.25
PNKP-221ENST00000627317 SP4Q02446 784 aa16.63■□□□□ 0.25
PNKP-221ENST00000627317 ITGB3BPQ13352 177 aaPredicted RBP16.63■□□□□ 0.25
PNKP-221ENST00000627317 ORC2Q13416 577 aaPredicted RBP16.63■□□□□ 0.25
PNKP-221ENST00000627317 RILPL1Q5EBL4 403 aa16.63■□□□□ 0.25
PNKP-221ENST00000627317 FOXD4L5Q5VV16 416 aaPredicted RBP16.63■□□□□ 0.25
PNKP-221ENST00000627317 C16orf59Q7L2K0 433 aa16.63■□□□□ 0.25
PNKP-221ENST00000627317 POTEDQ86YR6 584 aa16.63■□□□□ 0.25
PNKP-221ENST00000627317 FOXD4L4Q8WXT5 416 aaPredicted RBP16.63■□□□□ 0.25
PNKP-221ENST00000627317 VWCEQ96DN2 955 aa16.63■□□□□ 0.25
PNKP-221ENST00000627317 WNT8AQ9H1J5 351 aa16.63■□□□□ 0.25
PNKP-221ENST00000627317 ZSCAN16Q9H4T2 348 aaPredicted RBP16.63■□□□□ 0.25
PNKP-221ENST00000627317 JPH1Q9HDC5 661 aaPredicted RBP16.63■□□□□ 0.25
PNKP-221ENST00000627317 TRMT13Q9NUP7 481 aaKnown RBP16.63■□□□□ 0.25
PNKP-221ENST00000627317 NFASCO94856 1347 aa16.63■□□□□ 0.25
PNKP-221ENST00000627317 DDX39AO00148 427 aaKnown RBP16.62■□□□□ 0.25
PNKP-221ENST00000627317 GAS7O60861 476 aa16.62■□□□□ 0.25
PNKP-221ENST00000627317 ZSCAN22P10073 491 aaPredicted RBP16.62■□□□□ 0.25
PNKP-221ENST00000627317 NBR1Q14596 966 aa16.62■□□□□ 0.25
PNKP-221ENST00000627317 ZNF174Q15697 407 aa16.62■□□□□ 0.25
PNKP-221ENST00000627317 CALCRLQ16602 461 aa16.62■□□□□ 0.25
PNKP-221ENST00000627317 HSDL1Q3SXM5 330 aa16.62■□□□□ 0.25
PNKP-221ENST00000627317 LRCH2Q5VUJ6 765 aa16.62■□□□□ 0.25
PNKP-221ENST00000627317 SESTD1Q86VW0 696 aa16.62■□□□□ 0.25
PNKP-221ENST00000627317 ETNPPLQ8TBG4 499 aa16.62■□□□□ 0.25
PNKP-221ENST00000627317 PPP1R13LQ8WUF5 828 aa16.62■□□□□ 0.25
PNKP-221ENST00000627317 HIPK3Q9H422 1215 aa16.62■□□□□ 0.25
PNKP-221ENST00000627317 BCAS3Q9H6U6 928 aa16.62■□□□□ 0.25
PNKP-221ENST00000627317 TBC1D22BQ9NU19 505 aa16.62■□□□□ 0.25
PNKP-221ENST00000627317 SLC9A2Q9UBY0 812 aa16.62■□□□□ 0.25
PNKP-221ENST00000627317 DOCK5Q9H7D0 1870 aa16.62■□□□□ 0.25
PNKP-221ENST00000627317 CHD9Q3L8U1 2897 aa16.62■□□□□ 0.25
PNKP-221ENST00000627317 HAS3O00219 553 aa16.61■□□□□ 0.25
PNKP-221ENST00000627317 BAG4O95429 457 aaKnown RBP16.61■□□□□ 0.25
PNKP-221ENST00000627317 CSF2RAP15509 400 aa16.61■□□□□ 0.25
PNKP-221ENST00000627317 CYP2C18P33260 490 aa16.61■□□□□ 0.25
PNKP-221ENST00000627317 TOB1P50616 345 aaPredicted RBP16.61■□□□□ 0.25
PNKP-221ENST00000627317 PTPN11Q06124 597 aaPredicted RBP16.61■□□□□ 0.25
PNKP-221ENST00000627317 DGKDQ16760 1214 aa16.61■□□□□ 0.25
PNKP-221ENST00000627317 RASIP1Q5U651 963 aa16.61■□□□□ 0.25
PNKP-221ENST00000627317 SLC5A5Q92911 643 aa16.61■□□□□ 0.25
PNKP-221ENST00000627317 FAM20AQ96MK3 541 aa16.61■□□□□ 0.25
PNKP-221ENST00000627317 RIT2Q99578 217 aa16.61■□□□□ 0.25
PNKP-221ENST00000627317 TEKT3Q9BXF9 490 aa16.61■□□□□ 0.25
PNKP-221ENST00000627317 PPP1R12CQ9BZL4 782 aa16.61■□□□□ 0.25
PNKP-221ENST00000627317 KCNMB3Q9NPA1 279 aa16.61■□□□□ 0.25
PNKP-221ENST00000627317 TBX3O15119 743 aa16.6■□□□□ 0.25
PNKP-221ENST00000627317 F13A1P00488 732 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms