RNA–Protein interactions for RNA: ENST00000626021.2

PTP4A1-205, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 2,203 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-205ENST00000626021 TAF1DQ9H5J8 278 aaPredicted RBP4.59□□□□□ -1.67
PTP4A1-205ENST00000626021 CNOT10Q9H9A5 744 aaKnown RBP4.59□□□□□ -1.67
PTP4A1-205ENST00000626021 EPB41L5Q9HCM4 733 aa4.59□□□□□ -1.67
PTP4A1-205ENST00000626021 LUC7LQ9NQ29 371 aaKnown RBP4.59□□□□□ -1.67
PTP4A1-205ENST00000626021 SH3GLB2Q9NR46 395 aa4.59□□□□□ -1.67
PTP4A1-205ENST00000626021 RBM12Q9NTZ6 932 aaKnown RBP4.59□□□□□ -1.67
PTP4A1-205ENST00000626021 NFU1Q9UMS0 254 aa4.59□□□□□ -1.67
PTP4A1-205ENST00000626021 SIK3Q9Y2K2 1263 aa4.59□□□□□ -1.67
PTP4A1-205ENST00000626021 ZNF330Q9Y3S2 320 aaPredicted RBP4.59□□□□□ -1.67
PTP4A1-205ENST00000626021 ADAMTSL1Q8N6G6 1762 aa4.59□□□□□ -1.67
PTP4A1-205ENST00000626021 CFAP73A6NFT4 308 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 B4DLN1 442 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 GCOM1H8Y6P7 765 aaPredicted RBP4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 DNM1LO00429 736 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 WNT7AO00755 349 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 ORC4O43929 436 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 ONECUT3O60422 494 aaPredicted RBP4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 IDH1O75874 414 aaKnown RBP4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 MYZAPP0CAP1 466 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 SLC5A1P13866 664 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 SCP2P22307 547 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 CALML3P27482 149 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 PRPHP41219 470 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 STAT6P42226 847 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 MTIF2P46199 727 aaKnown RBP4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 SEC24CP53992 1094 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 PMS1P54277 932 aaKnown RBP4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 TNNC1P63316 161 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 CYP27A1Q02318 531 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 BYSLQ13895 437 aaKnown RBP4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 ITIH4Q14624 930 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 MAN2A1Q16706 1144 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 FAM98CQ17RN3 349 aaKnown RBP4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 VWA3BQ502W6 1294 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 NAALADL2Q58DX5 795 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 MEI1Q5TIA1 1274 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 KCTD16Q68DU8 428 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 CENPPQ6IPU0 288 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 NFRKBQ6P4R8 1299 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 PI16Q6UXB8 463 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 LDHAL6AQ6ZMR3 332 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 CCDC84Q86UT8 332 aaPredicted RBP4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 CSGALNACT2Q8N6G5 542 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 SCFD2Q8WU76 684 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 NUP133Q8WUM0 1156 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 CCT6BQ92526 530 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 ESR2Q92731 530 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 RSRC1Q96IZ7 334 aaKnown RBP4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 PBKQ96KB5 322 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 CALR3Q96L12 384 aaKnown RBP4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 CNOT6LQ96LI5 555 aaKnown RBP4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 AK8Q96MA6 479 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 UBAC1Q9BSL1 405 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 TRIM6Q9C030 488 aaPredicted RBP4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 RABEP2Q9H5N1 569 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 MLXIPQ9HAP2 919 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 INCENPQ9NQS7 918 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 CNNM1Q9NRU3 951 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 SWAP70Q9UH65 585 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 PLAAQ9Y263 795 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 LEMD3Q9Y2U8 911 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 SIPA1L1O43166 1804 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 CNTNAP5Q8WYK1 1306 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 ANKRD33BA6NCL7 494 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 CCDC188H7C350 402 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 LIN7AO14910 233 aaPredicted RBP4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 ASAP2O43150 1006 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 KCNQ2O43526 872 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 AKR1B10O60218 316 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 COBLO75128 1261 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 RPS6KA4O75676 772 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 MBD4O95243 580 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 FAM153BP0C7A2 387 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 BRD2P25440 801 aaKnown RBP4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 EIF4A3P38919 411 aaKnown RBP4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 ELF3P78545 371 aaPredicted RBP4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 AMPD3Q01432 767 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 GUCY2DQ02846 1103 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 TROAPQ12815 778 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 KIAA0753Q2KHM9 967 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 FAM153CQ494X1 144 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 PKDCCQ504Y2 493 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 C10orf76Q5T2E6 689 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 GALNT17Q6IS24 598 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 PDXDC1Q6P996 788 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 TMTC3Q6ZXV5 915 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 CACNA2D4Q7Z3S7 1137 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 KRT26Q7Z3Y9 468 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 CATIPQ7Z7H3 387 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 ARMC2Q8NEN0 867 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 SMCR8Q8TEV9 937 aaPredicted RBP4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 TCP11Q8WWU5 503 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 BAP1Q92560 729 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 RAPGEF5Q92565 580 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 DDX12PQ92771 950 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 CUL5Q93034 780 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 ANKRD27Q96NW4 1050 aa4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 INPP4AQ96PE3 977 aaPredicted RBP4.58□□□□□ -1.68
PTP4A1-205ENST00000626021 HOMER3Q9NSC5 361 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms