RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 KLHL29Q96CT2 875 aa16.58■□□□□ 0.25
PMS1-221ENST00000624204 PRMT1Q99873 361 aaKnown RBP16.58■□□□□ 0.25
PMS1-221ENST00000624204 KLHL33A6NCF5 533 aa16.58■□□□□ 0.24
PMS1-221ENST00000624204 F8VZ95 297 aa16.58■□□□□ 0.24
PMS1-221ENST00000624204 IGF2BP3O00425 579 aaKnown RBP eCLIP16.58■□□□□ 0.24
PMS1-221ENST00000624204 SMNDC1O75940 238 aaKnown RBP eCLIP16.58■□□□□ 0.24
PMS1-221ENST00000624204 CSF1RP07333 972 aa16.58■□□□□ 0.24
PMS1-221ENST00000624204 TXNRD1Q16881 649 aa16.58■□□□□ 0.24
PMS1-221ENST00000624204 ANKS1AQ92625 1134 aa16.58■□□□□ 0.24
PMS1-221ENST00000624204 MTFR1LQ9H019 292 aa16.58■□□□□ 0.24
PMS1-221ENST00000624204 ETAA1Q9NY74 926 aa16.58■□□□□ 0.24
PMS1-221ENST00000624204 SLC12A4Q9UP95 1085 aa16.58■□□□□ 0.24
PMS1-221ENST00000624204 NOC2LQ9Y3T9 749 aaKnown RBP16.58■□□□□ 0.24
PMS1-221ENST00000624204 LRRC14Q15048 493 aa16.58■□□□□ 0.24
PMS1-221ENST00000624204 FAM83BQ5T0W9 1011 aa16.58■□□□□ 0.24
PMS1-221ENST00000624204 ZBTB38Q8NAP3 1195 aaPredicted RBP16.58■□□□□ 0.24
PMS1-221ENST00000624204 ZNF512BQ96KM6 892 aaPredicted RBP16.58■□□□□ 0.24
PMS1-221ENST00000624204 LSM14BQ9BX40 385 aaKnown RBP16.58■□□□□ 0.24
PMS1-221ENST00000624204 SIPA1L3O60292 1781 aaPredicted RBP16.58■□□□□ 0.24
PMS1-221ENST00000624204 PGRMC1O00264 195 aaKnown RBP16.57■□□□□ 0.24
PMS1-221ENST00000624204 TLR2O60603 784 aa16.57■□□□□ 0.24
PMS1-221ENST00000624204 SERPING1P05155 500 aa16.57■□□□□ 0.24
PMS1-221ENST00000624204 MYL1P05976 194 aa16.57■□□□□ 0.24
PMS1-221ENST00000624204 NQO1P15559 274 aaKnown RBP16.57■□□□□ 0.24
PMS1-221ENST00000624204 BCAMP50895 628 aa16.57■□□□□ 0.24
PMS1-221ENST00000624204 PUM3Q15397 648 aaKnown RBP16.57■□□□□ 0.24
PMS1-221ENST00000624204 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.57■□□□□ 0.24
PMS1-221ENST00000624204 TRIM51Q9BSJ1 452 aa16.57■□□□□ 0.24
PMS1-221ENST00000624204 ECT2Q9H8V3 914 aa16.57■□□□□ 0.24
PMS1-221ENST00000624204 CFAP73A6NFT4 308 aa16.57■□□□□ 0.24
PMS1-221ENST00000624204 IRF6O14896 467 aa16.57■□□□□ 0.24
PMS1-221ENST00000624204 SHBGP04278 402 aa16.57■□□□□ 0.24
PMS1-221ENST00000624204 CALM1P0DP23 149 aa16.57■□□□□ 0.24
PMS1-221ENST00000624204 CALM2P0DP24 149 aa16.57■□□□□ 0.24
PMS1-221ENST00000624204 CALM3P0DP25 149 aa16.57■□□□□ 0.24
PMS1-221ENST00000624204 CCDC26Q8TAB7 109 aa16.57■□□□□ 0.24
PMS1-221ENST00000624204 DYDC1Q8WWB3 177 aa16.57■□□□□ 0.24
PMS1-221ENST00000624204 ACSBG1Q96GR2 724 aa16.57■□□□□ 0.24
PMS1-221ENST00000624204 L3MBTL3Q96JM7 780 aaPredicted RBP16.57■□□□□ 0.24
PMS1-221ENST00000624204 PCDHGC5Q9Y5F6 944 aa16.57■□□□□ 0.24
PMS1-221ENST00000624204 LAMB4A4D0S4 1761 aa16.57■□□□□ 0.24
PMS1-221ENST00000624204 SNUPNO95149 360 aaKnown RBP16.57■□□□□ 0.24
PMS1-221ENST00000624204 CALML3P27482 149 aa16.57■□□□□ 0.24
PMS1-221ENST00000624204 SPTY2D1Q68D10 685 aaPredicted RBP16.57■□□□□ 0.24
PMS1-221ENST00000624204 KIF6Q6ZMV9 814 aa16.57■□□□□ 0.24
PMS1-221ENST00000624204 OTUD6AQ7L8S5 288 aa16.57■□□□□ 0.24
PMS1-221ENST00000624204 DAAM2Q86T65 1068 aa16.57■□□□□ 0.24
PMS1-221ENST00000624204 UTP11Q9Y3A2 253 aaKnown RBP16.57■□□□□ 0.24
PMS1-221ENST00000624204 MPHOSPH10O00566 681 aaKnown RBP16.56■□□□□ 0.24
PMS1-221ENST00000624204 GSTA1P08263 222 aa16.56■□□□□ 0.24
PMS1-221ENST00000624204 MYBP10242 640 aa16.56■□□□□ 0.24
PMS1-221ENST00000624204 TAF11Q15544 211 aa16.56■□□□□ 0.24
PMS1-221ENST00000624204 HOOK3Q86VS8 718 aa16.56■□□□□ 0.24
PMS1-221ENST00000624204 VGLL2Q8N8G2 317 aa16.56■□□□□ 0.24
PMS1-221ENST00000624204 ZNF317Q96PQ6 595 aaPredicted RBP16.56■□□□□ 0.24
PMS1-221ENST00000624204 MTA3Q9BTC8 594 aa16.56■□□□□ 0.24
PMS1-221ENST00000624204 SLC5A1P13866 664 aa16.56■□□□□ 0.24
PMS1-221ENST00000624204 CACNB1Q02641 598 aaPredicted RBP16.56■□□□□ 0.24
PMS1-221ENST00000624204 ICA1Q05084 483 aa16.56■□□□□ 0.24
PMS1-221ENST00000624204 RIPK1Q13546 671 aa16.56■□□□□ 0.24
PMS1-221ENST00000624204 SLC18A3Q16572 532 aa16.56■□□□□ 0.24
PMS1-221ENST00000624204 LETM2Q2VYF4 491 aa16.56■□□□□ 0.24
PMS1-221ENST00000624204 HEATR3Q7Z4Q2 680 aa16.56■□□□□ 0.24
PMS1-221ENST00000624204 NELFCDQ8IXH7 590 aa16.56■□□□□ 0.24
PMS1-221ENST00000624204 FMO2Q99518 471 aa16.56■□□□□ 0.24
PMS1-221ENST00000624204 CCSER1Q9C0I3 900 aa16.56■□□□□ 0.24
PMS1-221ENST00000624204 LRP6O75581 1613 aa16.56■□□□□ 0.24
PMS1-221ENST00000624204 MEGF6O75095 1541 aa16.55■□□□□ 0.24
PMS1-221ENST00000624204 TECP42680 631 aa16.55■□□□□ 0.24
PMS1-221ENST00000624204 CTSWP56202 376 aa16.55■□□□□ 0.24
PMS1-221ENST00000624204 RWDD2BP57060 319 aa16.55■□□□□ 0.24
PMS1-221ENST00000624204 AMPD3Q01432 767 aa16.55■□□□□ 0.24
PMS1-221ENST00000624204 PFKFB3Q16875 520 aaPredicted RBP16.55■□□□□ 0.24
PMS1-221ENST00000624204 CCDC25Q86WR0 208 aa16.55■□□□□ 0.24
PMS1-221ENST00000624204 OSBPL1AQ9BXW6 950 aa16.55■□□□□ 0.24
PMS1-221ENST00000624204 TRMT112Q9UI30 125 aaKnown RBP16.55■□□□□ 0.24
PMS1-221ENST00000624204 ATP6V0A2Q9Y487 856 aa16.55■□□□□ 0.24
PMS1-221ENST00000624204 IRS4O14654 1257 aaPredicted RBP16.55■□□□□ 0.24
PMS1-221ENST00000624204 RGS16O15492 202 aaPredicted RBP16.55■□□□□ 0.24
PMS1-221ENST00000624204 FGFR1OPO95684 399 aaKnown RBP16.55■□□□□ 0.24
PMS1-221ENST00000624204 SLMAPQ14BN4 828 aa16.55■□□□□ 0.24
PMS1-221ENST00000624204 ANKRD20A2Q5SQ80 823 aa16.55■□□□□ 0.24
PMS1-221ENST00000624204 ANKRD20A1Q5TYW2 823 aa16.55■□□□□ 0.24
PMS1-221ENST00000624204 ANKRD20A3Q5VUR7 823 aa16.55■□□□□ 0.24
PMS1-221ENST00000624204 METTL13Q8N6R0 699 aa16.55■□□□□ 0.24
PMS1-221ENST00000624204 AZI2Q9H6S1 392 aa16.55■□□□□ 0.24
PMS1-221ENST00000624204 DYNLL1P63167 89 aaKnown RBP16.55■□□□□ 0.24
PMS1-221ENST00000624204 KCNMA1Q12791 1236 aa16.55■□□□□ 0.24
PMS1-221ENST00000624204 ZNF268Q14587 947 aaPredicted RBP16.55■□□□□ 0.24
PMS1-221ENST00000624204 SOGA3Q5TF21 947 aa16.55■□□□□ 0.24
PMS1-221ENST00000624204 CENPPQ6IPU0 288 aa16.55■□□□□ 0.24
PMS1-221ENST00000624204 SLC17A8Q8NDX2 589 aa16.55■□□□□ 0.24
PMS1-221ENST00000624204 SCFD2Q8WU76 684 aa16.55■□□□□ 0.24
PMS1-221ENST00000624204 SLC5A4Q9NY91 659 aa16.55■□□□□ 0.24
PMS1-221ENST00000624204 TMEM59LQ9UK28 342 aa16.55■□□□□ 0.24
PMS1-221ENST00000624204 AKAP11Q9UKA4 1901 aa16.54■□□□□ 0.24
PMS1-221ENST00000624204 PDHA1P08559 390 aa16.54■□□□□ 0.24
PMS1-221ENST00000624204 EPS15P42566 896 aa16.54■□□□□ 0.24
PMS1-221ENST00000624204 IFI35P80217 286 aaPredicted RBP16.54■□□□□ 0.24
PMS1-221ENST00000624204 NBPF20Q3BBV1 942 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms