RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 SPC25Q9HBM1 224 aa22.36■■□□□ 1.17
PDLIM2-221ENST00000622702 GDPD2Q9HCC8 539 aa22.36■■□□□ 1.17
PDLIM2-221ENST00000622702 ELP1O95163 1332 aa22.36■■□□□ 1.17
PDLIM2-221ENST00000622702 GGPS1O95749 300 aa22.35■■□□□ 1.17
PDLIM2-221ENST00000622702 C6orf222P0C671 652 aaPredicted RBP22.35■■□□□ 1.17
PDLIM2-221ENST00000622702 GJA9P57773 515 aa22.35■■□□□ 1.17
PDLIM2-221ENST00000622702 IRX5P78411 483 aaPredicted RBP22.35■■□□□ 1.17
PDLIM2-221ENST00000622702 PPP2R5CQ13362 524 aa22.35■■□□□ 1.17
PDLIM2-221ENST00000622702 TMEM266Q2M3C6 531 aa22.35■■□□□ 1.17
PDLIM2-221ENST00000622702 TLK2Q86UE8 772 aa22.35■■□□□ 1.17
PDLIM2-221ENST00000622702 EMID1Q96A84 441 aaPredicted RBP22.35■■□□□ 1.17
PDLIM2-221ENST00000622702 AP5M1Q9H0R1 490 aa22.35■■□□□ 1.17
PDLIM2-221ENST00000622702 JPH1Q9HDC5 661 aaPredicted RBP22.35■■□□□ 1.17
PDLIM2-221ENST00000622702 MYADML2A6NDP7 307 aa22.34■■□□□ 1.17
PDLIM2-221ENST00000622702 DYNC1LI2O43237 492 aaPredicted RBP22.34■■□□□ 1.17
PDLIM2-221ENST00000622702 GH1P01241 217 aa22.34■■□□□ 1.17
PDLIM2-221ENST00000622702 COL6A1P12109 1028 aa22.34■■□□□ 1.17
PDLIM2-221ENST00000622702 KRT76Q01546 638 aa22.34■■□□□ 1.17
PDLIM2-221ENST00000622702 PDIA5Q14554 519 aa22.34■■□□□ 1.17
PDLIM2-221ENST00000622702 CSPP1Q1MSJ5 1256 aa22.34■■□□□ 1.17
PDLIM2-221ENST00000622702 CYFIP1Q7L576 1253 aa22.34■■□□□ 1.17
PDLIM2-221ENST00000622702 IGSF22Q8N9C0 903 aa22.34■■□□□ 1.17
PDLIM2-221ENST00000622702 TMEM87AQ8NBN3 555 aa22.34■■□□□ 1.17
PDLIM2-221ENST00000622702 RAB34Q9BZG1 259 aa22.34■■□□□ 1.17
PDLIM2-221ENST00000622702 UPF3AQ9H1J1 476 aaKnown RBP22.34■■□□□ 1.17
PDLIM2-221ENST00000622702 BCAS3Q9H6U6 928 aa22.34■■□□□ 1.17
PDLIM2-221ENST00000622702 SLC9A2Q9UBY0 812 aa22.34■■□□□ 1.17
PDLIM2-221ENST00000622702 Q9Y3F1 56 aa22.34■■□□□ 1.17
PDLIM2-221ENST00000622702 VWA3AA6NCI4 1184 aa22.34■■□□□ 1.17
PDLIM2-221ENST00000622702 TECP42680 631 aa22.34■■□□□ 1.17
PDLIM2-221ENST00000622702 ME1P48163 572 aa22.34■■□□□ 1.17
PDLIM2-221ENST00000622702 ARHGAP1Q07960 439 aa22.34■■□□□ 1.17
PDLIM2-221ENST00000622702 LAMC2Q13753 1193 aa22.34■■□□□ 1.17
PDLIM2-221ENST00000622702 ZNF746Q6NUN9 644 aaPredicted RBP22.34■■□□□ 1.17
PDLIM2-221ENST00000622702 DHX37Q8IY37 1157 aaKnown RBP22.34■■□□□ 1.17
PDLIM2-221ENST00000622702 KLHDC9Q8NEP7 349 aa22.34■■□□□ 1.17
PDLIM2-221ENST00000622702 COPS5Q92905 334 aa22.34■■□□□ 1.17
PDLIM2-221ENST00000622702 SENP6Q9GZR1 1112 aaPredicted RBP22.34■■□□□ 1.17
PDLIM2-221ENST00000622702 UNC45AQ9H3U1 944 aa22.34■■□□□ 1.17
PDLIM2-221ENST00000622702 MLXIPQ9HAP2 919 aa22.34■■□□□ 1.17
PDLIM2-221ENST00000622702 TCEAL9Q9UHQ7 104 aa22.34■■□□□ 1.17
PDLIM2-221ENST00000622702 PCDHA7Q9UN72 937 aa22.34■■□□□ 1.17
PDLIM2-221ENST00000622702 DDX39AO00148 427 aaKnown RBP22.33■■□□□ 1.16
PDLIM2-221ENST00000622702 CUTAO60888 179 aa22.33■■□□□ 1.16
PDLIM2-221ENST00000622702 CCNE2O96020 404 aa22.33■■□□□ 1.16
PDLIM2-221ENST00000622702 LONP1P36776 959 aaKnown RBP22.33■■□□□ 1.16
PDLIM2-221ENST00000622702 GRIN1Q05586 938 aa22.33■■□□□ 1.16
PDLIM2-221ENST00000622702 GNASQ5JWF2 1037 aa22.33■■□□□ 1.16
PDLIM2-221ENST00000622702 AXDND1Q5T1B0 1012 aaPredicted RBP22.33■■□□□ 1.16
PDLIM2-221ENST00000622702 ZNF579Q8NAF0 562 aaKnown RBP22.33■■□□□ 1.16
PDLIM2-221ENST00000622702 AK8Q96MA6 479 aa22.33■■□□□ 1.16
PDLIM2-221ENST00000622702 CTAGE5O15320 804 aa22.32■■□□□ 1.16
PDLIM2-221ENST00000622702 BEX3Q00994 111 aa22.32■■□□□ 1.16
PDLIM2-221ENST00000622702 KCNA10Q16322 511 aa22.32■■□□□ 1.16
PDLIM2-221ENST00000622702 SMAP1Q8IYB5 467 aaPredicted RBP22.32■■□□□ 1.16
PDLIM2-221ENST00000622702 RDM1Q8NG50 284 aa22.32■■□□□ 1.16
PDLIM2-221ENST00000622702 HTATIP2Q9BUP3 242 aa22.32■■□□□ 1.16
PDLIM2-221ENST00000622702 DOCK5Q9H7D0 1870 aa22.31■■□□□ 1.16
PDLIM2-221ENST00000622702 POTEMA6NI47 508 aa22.31■■□□□ 1.16
PDLIM2-221ENST00000622702 CST5P28325 142 aaPredicted RBP22.31■■□□□ 1.16
PDLIM2-221ENST00000622702 SFNP31947 248 aa22.31■■□□□ 1.16
PDLIM2-221ENST00000622702 JAK3P52333 1124 aa22.31■■□□□ 1.16
PDLIM2-221ENST00000622702 NKX3-2P78367 333 aa22.31■■□□□ 1.16
PDLIM2-221ENST00000622702 OR6J1Q8NGC5 347 aa22.31■■□□□ 1.16
PDLIM2-221ENST00000622702 CLIC6Q96NY7 704 aa22.31■■□□□ 1.16
PDLIM2-221ENST00000622702 TSEN34Q9BSV6 310 aaKnown RBP22.31■■□□□ 1.16
PDLIM2-221ENST00000622702 CSRNP2Q9H175 543 aa22.31■■□□□ 1.16
PDLIM2-221ENST00000622702 PHF24Q9UPV7 400 aa22.31■■□□□ 1.16
PDLIM2-221ENST00000622702 WDR64B1ANS9 1081 aa22.3■■□□□ 1.16
PDLIM2-221ENST00000622702 ACLYP53396 1101 aa22.3■■□□□ 1.16
PDLIM2-221ENST00000622702 ACTR2P61160 394 aa22.3■■□□□ 1.16
PDLIM2-221ENST00000622702 FSCN1Q16658 493 aaKnown RBP22.3■■□□□ 1.16
PDLIM2-221ENST00000622702 ADALQ6DHV7 355 aa22.3■■□□□ 1.16
PDLIM2-221ENST00000622702 CCSAPQ6IQ19 270 aaPredicted RBP22.3■■□□□ 1.16
PDLIM2-221ENST00000622702 PCSK9Q8NBP7 692 aaKnown RBP22.3■■□□□ 1.16
PDLIM2-221ENST00000622702 PPTC7Q8NI37 304 aa22.3■■□□□ 1.16
PDLIM2-221ENST00000622702 SPATA33Q96N06 139 aa22.3■■□□□ 1.16
PDLIM2-221ENST00000622702 LRWD1Q9UFC0 647 aa22.3■■□□□ 1.16
PDLIM2-221ENST00000622702 EML1O00423 815 aa22.29■■□□□ 1.16
PDLIM2-221ENST00000622702 CHMP2AO43633 222 aa22.29■■□□□ 1.16
PDLIM2-221ENST00000622702 SORBS3O60504 671 aa22.29■■□□□ 1.16
PDLIM2-221ENST00000622702 ATG7O95352 703 aa22.29■■□□□ 1.16
PDLIM2-221ENST00000622702 HSDL1Q3SXM5 330 aa22.29■■□□□ 1.16
PDLIM2-221ENST00000622702 NCAPH2Q6IBW4 605 aa22.29■■□□□ 1.16
PDLIM2-221ENST00000622702 MIER3Q7Z3K6 550 aa22.29■■□□□ 1.16
PDLIM2-221ENST00000622702 GPR20Q99678 358 aa22.29■■□□□ 1.16
PDLIM2-221ENST00000622702 DISC1Q9NRI5 854 aa22.29■■□□□ 1.16
PDLIM2-221ENST00000622702 STK24Q9Y6E0 443 aa22.29■■□□□ 1.16
PDLIM2-221ENST00000622702 MOXD2PA6NHM9 499 aa22.28■■□□□ 1.16
PDLIM2-221ENST00000622702 NOP56O00567 594 aaKnown RBP22.28■■□□□ 1.16
PDLIM2-221ENST00000622702 ASGR1P07306 291 aa22.28■■□□□ 1.16
PDLIM2-221ENST00000622702 SP4Q02446 784 aa22.28■■□□□ 1.16
PDLIM2-221ENST00000622702 EPHA7Q15375 998 aa22.28■■□□□ 1.16
PDLIM2-221ENST00000622702 ABHD15Q6UXT9 468 aa22.28■■□□□ 1.16
PDLIM2-221ENST00000622702 SEPT1Q8WYJ6 367 aa22.28■■□□□ 1.16
PDLIM2-221ENST00000622702 DPF3Q92784 378 aa22.28■■□□□ 1.16
PDLIM2-221ENST00000622702 TELO2Q9Y4R8 837 aa22.28■■□□□ 1.16
PDLIM2-221ENST00000622702 PCDHA10Q9Y5I2 948 aa22.28■■□□□ 1.16
PDLIM2-221ENST00000622702 A0A1W2PQ27 194 aa22.28■■□□□ 1.16
PDLIM2-221ENST00000622702 A0A1W2PQ45 241 aaPredicted RBP22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms