RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 ACTN1P12814 892 aa20.51■□□□□ 0.87
SCAMP4-213ENST00000621748 IFNAR1P17181 557 aa20.51■□□□□ 0.87
SCAMP4-213ENST00000621748 SREBF1P36956 1147 aa20.51■□□□□ 0.87
SCAMP4-213ENST00000621748 AP3B2Q13367 1082 aa20.51■□□□□ 0.87
SCAMP4-213ENST00000621748 CEP55Q53EZ4 464 aa20.51■□□□□ 0.87
SCAMP4-213ENST00000621748 ZNF618Q5T7W0 954 aa20.51■□□□□ 0.87
SCAMP4-213ENST00000621748 SEPT1Q8WYJ6 367 aa20.51■□□□□ 0.87
SCAMP4-213ENST00000621748 ATP6V0A1Q93050 837 aa20.51■□□□□ 0.87
SCAMP4-213ENST00000621748 SLC26A6Q9BXS9 759 aa20.51■□□□□ 0.87
SCAMP4-213ENST00000621748 RNF26Q9BY78 433 aaPredicted RBP20.51■□□□□ 0.87
SCAMP4-213ENST00000621748 SETD4Q9NVD3 440 aa20.51■□□□□ 0.87
SCAMP4-213ENST00000621748 ZNF215Q9UL58 517 aaPredicted RBP20.51■□□□□ 0.87
SCAMP4-213ENST00000621748 YBX2Q9Y2T7 364 aaKnown RBP20.51■□□□□ 0.87
SCAMP4-213ENST00000621748 MEIS1O00470 390 aa20.5■□□□□ 0.87
SCAMP4-213ENST00000621748 ATP2A2P16615 1042 aaKnown RBP20.5■□□□□ 0.87
SCAMP4-213ENST00000621748 AKAP17AQ02040 695 aaKnown RBP20.5■□□□□ 0.87
SCAMP4-213ENST00000621748 RAB30Q15771 203 aa20.5■□□□□ 0.87
SCAMP4-213ENST00000621748 NKX2-4Q9H2Z4 354 aa20.5■□□□□ 0.87
SCAMP4-213ENST00000621748 MSRAQ9UJ68 235 aa20.5■□□□□ 0.87
SCAMP4-213ENST00000621748 A0A0C4DFX4 3053 aa20.5■□□□□ 0.87
SCAMP4-213ENST00000621748 CXCL10P02778 98 aa20.49■□□□□ 0.87
SCAMP4-213ENST00000621748 MYOGP15173 224 aa20.49■□□□□ 0.87
SCAMP4-213ENST00000621748 THPOP40225 353 aa20.49■□□□□ 0.87
SCAMP4-213ENST00000621748 ADAM17P78536 824 aa20.49■□□□□ 0.87
SCAMP4-213ENST00000621748 ARHGAP4P98171 946 aa20.49■□□□□ 0.87
SCAMP4-213ENST00000621748 MBTPS1Q14703 1052 aa20.49■□□□□ 0.87
SCAMP4-213ENST00000621748 TCTN1Q2MV58 587 aa20.49■□□□□ 0.87
SCAMP4-213ENST00000621748 SLC17A8Q8NDX2 589 aa20.49■□□□□ 0.87
SCAMP4-213ENST00000621748 CRYGNQ8WXF5 182 aa20.49■□□□□ 0.87
SCAMP4-213ENST00000621748 ZNF274Q96GC6 653 aaPredicted RBP20.49■□□□□ 0.87
SCAMP4-213ENST00000621748 C6orf50Q9HD87 102 aa20.49■□□□□ 0.87
SCAMP4-213ENST00000621748 PDRG1Q9NUG6 133 aa20.49■□□□□ 0.87
SCAMP4-213ENST00000621748 PRUNE2Q8WUY3 3088 aa20.49■□□□□ 0.87
SCAMP4-213ENST00000621748 CHD7Q9P2D1 2997 aa20.49■□□□□ 0.87
SCAMP4-213ENST00000621748 PARNO95453 639 aaKnown RBP20.48■□□□□ 0.87
SCAMP4-213ENST00000621748 ITGB3BPQ13352 177 aaPredicted RBP20.48■□□□□ 0.87
SCAMP4-213ENST00000621748 CCDC12Q8WUD4 166 aaPredicted RBP20.48■□□□□ 0.87
SCAMP4-213ENST00000621748 AGO4Q9HCK5 861 aaKnown RBP20.48■□□□□ 0.87
SCAMP4-213ENST00000621748 JPH1Q9HDC5 661 aaPredicted RBP20.48■□□□□ 0.87
SCAMP4-213ENST00000621748 PTPRSQ13332 1948 aa20.47■□□□□ 0.87
SCAMP4-213ENST00000621748 FAM86B1E9PN63 330 aa20.47■□□□□ 0.87
SCAMP4-213ENST00000621748 FAM86B2P0C5J1 330 aa20.47■□□□□ 0.87
SCAMP4-213ENST00000621748 GNAT1P11488 350 aa20.47■□□□□ 0.87
SCAMP4-213ENST00000621748 ZNF76P36508 570 aa20.47■□□□□ 0.87
SCAMP4-213ENST00000621748 REXO1Q8N1G1 1221 aaKnown RBP20.47■□□□□ 0.87
SCAMP4-213ENST00000621748 RASGRP4Q8TDF6 673 aa20.47■□□□□ 0.87
SCAMP4-213ENST00000621748 LMBR1Q8WVP7 490 aa20.47■□□□□ 0.87
SCAMP4-213ENST00000621748 PCYT2Q99447 389 aa20.47■□□□□ 0.87
SCAMP4-213ENST00000621748 VPS54Q9P1Q0 977 aa20.47■□□□□ 0.87
SCAMP4-213ENST00000621748 SLC9A2Q9UBY0 812 aa20.47■□□□□ 0.87
SCAMP4-213ENST00000621748 PCDHA11Q9Y5I1 949 aa20.47■□□□□ 0.87
SCAMP4-213ENST00000621748 NFASCO94856 1347 aa20.47■□□□□ 0.87
SCAMP4-213ENST00000621748 UNC80Q8N2C7 3258 aa20.46■□□□□ 0.87
SCAMP4-213ENST00000621748 RSPH10B2B2RC85 870 aa20.46■□□□□ 0.87
SCAMP4-213ENST00000621748 BAIAP3O94812 1187 aa20.46■□□□□ 0.87
SCAMP4-213ENST00000621748 CYP3A4P08684 503 aa20.46■□□□□ 0.87
SCAMP4-213ENST00000621748 RSPH10BP0C881 870 aa20.46■□□□□ 0.87
SCAMP4-213ENST00000621748 FOSL2P15408 326 aa20.46■□□□□ 0.87
SCAMP4-213ENST00000621748 MARK3P27448 753 aa20.46■□□□□ 0.87
SCAMP4-213ENST00000621748 GNA11P29992 359 aa20.46■□□□□ 0.87
SCAMP4-213ENST00000621748 STK3Q13188 491 aa20.46■□□□□ 0.87
SCAMP4-213ENST00000621748 CNKSR3Q6P9H4 555 aa20.46■□□□□ 0.87
SCAMP4-213ENST00000621748 PHOSPHO2Q8TCD6 241 aa20.46■□□□□ 0.87
SCAMP4-213ENST00000621748 GLG1Q92896 1179 aa20.46■□□□□ 0.87
SCAMP4-213ENST00000621748 SLC9A7Q96T83 725 aa20.46■□□□□ 0.87
SCAMP4-213ENST00000621748 SDF4Q9BRK5 362 aa20.46■□□□□ 0.87
SCAMP4-213ENST00000621748 SMARCAD1Q9H4L7 1026 aa20.46■□□□□ 0.87
SCAMP4-213ENST00000621748 SLC28A3Q9HAS3 691 aa20.46■□□□□ 0.87
SCAMP4-213ENST00000621748 ERAP1Q9NZ08 941 aa20.46■□□□□ 0.87
SCAMP4-213ENST00000621748 NRCAMQ92823 1304 aa20.46■□□□□ 0.87
SCAMP4-213ENST00000621748 IGLV3-22A0A075B6J6 115 aa20.45■□□□□ 0.86
SCAMP4-213ENST00000621748 LGR5O75473 907 aa20.45■□□□□ 0.86
SCAMP4-213ENST00000621748 ACTR2P61160 394 aa20.45■□□□□ 0.86
SCAMP4-213ENST00000621748 SSRP1Q08945 709 aaKnown RBP20.45■□□□□ 0.86
SCAMP4-213ENST00000621748 MCTP2Q6DN12 878 aa20.45■□□□□ 0.86
SCAMP4-213ENST00000621748 NIPA1Q7RTP0 329 aa20.45■□□□□ 0.86
SCAMP4-213ENST00000621748 PLA2G4DQ86XP0 818 aa20.45■□□□□ 0.86
SCAMP4-213ENST00000621748 EMSYQ7Z589 1322 aa20.45■□□□□ 0.86
SCAMP4-213ENST00000621748 WDR5P61964 334 aaKnown RBP20.44■□□□□ 0.86
SCAMP4-213ENST00000621748 PPFIA1Q13136 1202 aa20.44■□□□□ 0.86
SCAMP4-213ENST00000621748 HERC6Q8IVU3 1022 aa20.44■□□□□ 0.86
SCAMP4-213ENST00000621748 TRIM22Q8IYM9 498 aa20.44■□□□□ 0.86
SCAMP4-213ENST00000621748 CCDC148Q8NFR7 591 aa20.44■□□□□ 0.86
SCAMP4-213ENST00000621748 MAFAQ8NHW3 353 aaPredicted RBP20.44■□□□□ 0.86
SCAMP4-213ENST00000621748 UIMC1Q96RL1 719 aa20.44■□□□□ 0.86
SCAMP4-213ENST00000621748 OSBPL7Q9BZF2 842 aa20.44■□□□□ 0.86
SCAMP4-213ENST00000621748 PRDM12Q9H4Q4 367 aa20.44■□□□□ 0.86
SCAMP4-213ENST00000621748 SH3GLB2Q9NR46 395 aa20.44■□□□□ 0.86
SCAMP4-213ENST00000621748 ABHD14A-ACY1A0A1B0GW23 586 aa20.43■□□□□ 0.86
SCAMP4-213ENST00000621748 CPLX1O14810 134 aa20.43■□□□□ 0.86
SCAMP4-213ENST00000621748 DHX15O43143 795 aaKnown RBP20.43■□□□□ 0.86
SCAMP4-213ENST00000621748 ATG7O95352 703 aa20.43■□□□□ 0.86
SCAMP4-213ENST00000621748 CCNE2O96020 404 aa20.43■□□□□ 0.86
SCAMP4-213ENST00000621748 CTSHP09668 335 aa20.43■□□□□ 0.86
SCAMP4-213ENST00000621748 KCNJ6P48051 423 aa20.43■□□□□ 0.86
SCAMP4-213ENST00000621748 ANAPC15P60006 121 aa20.43■□□□□ 0.86
SCAMP4-213ENST00000621748 DEFB103AP81534 67 aa20.43■□□□□ 0.86
SCAMP4-213ENST00000621748 GRIK4Q16099 956 aa20.43■□□□□ 0.86
SCAMP4-213ENST00000621748 MARCH8Q5T0T0 291 aa20.43■□□□□ 0.86
SCAMP4-213ENST00000621748 PPP2R2DQ66LE6 453 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms