RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 KLHL5Q96PQ7 755 aa2.83□□□□□ -1.96
CPNE3-211ENST00000621526 NUP88Q99567 741 aaPredicted RBP2.83□□□□□ -1.96
CPNE3-211ENST00000621526 DDX23Q9BUQ8 820 aaKnown RBP2.83□□□□□ -1.96
CPNE3-211ENST00000621526 SMOC2Q9H3U7 446 aa2.83□□□□□ -1.96
CPNE3-211ENST00000621526 RNPEPQ9H4A4 650 aa2.83□□□□□ -1.96
CPNE3-211ENST00000621526 TBC1D17Q9HA65 648 aa2.83□□□□□ -1.96
CPNE3-211ENST00000621526 ZNF287Q9HBT7 754 aa2.83□□□□□ -1.96
CPNE3-211ENST00000621526 PIH1D3Q9NQM4 214 aaKnown RBP2.83□□□□□ -1.96
CPNE3-211ENST00000621526 SLC2A4RGQ9NR83 387 aa2.83□□□□□ -1.96
CPNE3-211ENST00000621526 TSHZ2Q9NRE2 1034 aa2.83□□□□□ -1.96
CPNE3-211ENST00000621526 DZANK1Q9NVP4 752 aa2.83□□□□□ -1.96
CPNE3-211ENST00000621526 TMEM260Q9NX78 707 aa2.83□□□□□ -1.96
CPNE3-211ENST00000621526 EPS15L1Q9UBC2 864 aa2.83□□□□□ -1.96
CPNE3-211ENST00000621526 DDX41Q9UJV9 622 aaKnown RBP2.83□□□□□ -1.96
CPNE3-211ENST00000621526 DBR1Q9UK59 544 aaKnown RBP2.83□□□□□ -1.96
CPNE3-211ENST00000621526 RAB23Q9ULC3 237 aa2.83□□□□□ -1.96
CPNE3-211ENST00000621526 SMG5Q9UPR3 1016 aaKnown RBP2.83□□□□□ -1.96
CPNE3-211ENST00000621526 IRAK3Q9Y616 596 aa2.83□□□□□ -1.96
CPNE3-211ENST00000621526 MRPL42Q9Y6G3 142 aaKnown RBP2.83□□□□□ -1.96
CPNE3-211ENST00000621526 DSPP15924 2871 aaKnown RBP2.83□□□□□ -1.96
CPNE3-211ENST00000621526 ITPR1Q14643 2758 aa2.83□□□□□ -1.96
CPNE3-211ENST00000621526 MYO7AQ13402 2215 aa2.83□□□□□ -1.96
CPNE3-211ENST00000621526 FRMPD3Q5JV73 1810 aa2.82□□□□□ -1.96
CPNE3-211ENST00000621526 DLG5Q8TDM6 1919 aa2.82□□□□□ -1.96
CPNE3-211ENST00000621526 KANSL1LA0AUZ9 987 aa2.82□□□□□ -1.96
CPNE3-211ENST00000621526 CARNS1A5YM72 827 aa2.82□□□□□ -1.96
CPNE3-211ENST00000621526 CAPN8A6NHC0 703 aa2.82□□□□□ -1.96
CPNE3-211ENST00000621526 EIF4E1BA6NMX2 242 aaKnown RBP2.82□□□□□ -1.96
CPNE3-211ENST00000621526 H3BRB1 525 aa2.82□□□□□ -1.96
CPNE3-211ENST00000621526 SRGAP3O43295 1099 aa2.82□□□□□ -1.96
CPNE3-211ENST00000621526 RAD21O60216 631 aa2.82□□□□□ -1.96
CPNE3-211ENST00000621526 PPFIA3O75145 1194 aa2.82□□□□□ -1.96
CPNE3-211ENST00000621526 ZIC2O95409 532 aaPredicted RBP2.82□□□□□ -1.96
CPNE3-211ENST00000621526 PAPLNO95428 1278 aa2.82□□□□□ -1.96
CPNE3-211ENST00000621526 TTLL1O95922 423 aa2.82□□□□□ -1.96
CPNE3-211ENST00000621526 C1RP00736 705 aa2.82□□□□□ -1.96
CPNE3-211ENST00000621526 CHRNA1P02708 482 aa2.82□□□□□ -1.96
CPNE3-211ENST00000621526 CAPNS1P04632 268 aa2.82□□□□□ -1.96
CPNE3-211ENST00000621526 DCNP07585 359 aaKnown RBP2.82□□□□□ -1.96
CPNE3-211ENST00000621526 GNAI3P08754 354 aa2.82□□□□□ -1.96
CPNE3-211ENST00000621526 ZNF806P0C7X5 589 aa2.82□□□□□ -1.96
CPNE3-211ENST00000621526 RFX1P22670 979 aa2.82□□□□□ -1.96
CPNE3-211ENST00000621526 RPS9P46781 194 aaKnown RBP2.82□□□□□ -1.96
CPNE3-211ENST00000621526 CHMP4BP1P59074 171 aa2.82□□□□□ -1.96
CPNE3-211ENST00000621526 FAM189BP81408 668 aa2.82□□□□□ -1.96
CPNE3-211ENST00000621526 RBM10P98175 930 aaKnown RBP2.82□□□□□ -1.96
CPNE3-211ENST00000621526 SPEM2Q0P670 501 aa2.82□□□□□ -1.96
CPNE3-211ENST00000621526 HIC1Q14526 733 aa2.82□□□□□ -1.96
CPNE3-211ENST00000621526 PPP2R5DQ14738 602 aa2.82□□□□□ -1.96
CPNE3-211ENST00000621526 STXBP2Q15833 593 aa2.82□□□□□ -1.96
CPNE3-211ENST00000621526 LY6KQ17RY6 165 aa2.82□□□□□ -1.96
CPNE3-211ENST00000621526 SBK1Q52WX2 424 aa2.82□□□□□ -1.96
CPNE3-211ENST00000621526 TNNI3KQ59H18 835 aa2.82□□□□□ -1.96
CPNE3-211ENST00000621526 MUM1L1Q5H9M0 696 aa2.82□□□□□ -1.96
CPNE3-211ENST00000621526 ZBTB41Q5SVQ8 909 aa2.82□□□□□ -1.96
CPNE3-211ENST00000621526 SLC9C2Q5TAH2 1124 aa2.82□□□□□ -1.96
CPNE3-211ENST00000621526 MYSM1Q5VVJ2 828 aa2.82□□□□□ -1.96
CPNE3-211ENST00000621526 SLFN13Q68D06 897 aa2.82□□□□□ -1.96
CPNE3-211ENST00000621526 TAF2Q6P1X5 1199 aa2.82□□□□□ -1.96
CPNE3-211ENST00000621526 GIMAP6Q6P9H5 292 aa2.82□□□□□ -1.96
CPNE3-211ENST00000621526 CTR9Q6PD62 1173 aa2.82□□□□□ -1.96
CPNE3-211ENST00000621526 DCLRE1AQ6PJP8 1040 aa2.82□□□□□ -1.96
CPNE3-211ENST00000621526 BTNL9Q6UXG8 535 aa2.82□□□□□ -1.96
CPNE3-211ENST00000621526 NSMFQ6X4W1 530 aa2.82□□□□□ -1.96
CPNE3-211ENST00000621526 RNF207Q6ZRF8 634 aa2.82□□□□□ -1.96
CPNE3-211ENST00000621526 C15orf39Q6ZRI6 1047 aa2.82□□□□□ -1.96
CPNE3-211ENST00000621526 PRR23CQ6ZRP0 262 aa2.82□□□□□ -1.96
CPNE3-211ENST00000621526 TMC7Q7Z402 723 aa2.82□□□□□ -1.96
CPNE3-211ENST00000621526 RSPH3Q86UC2 560 aa2.82□□□□□ -1.96
CPNE3-211ENST00000621526 PDZD3Q86UT5 571 aa2.82□□□□□ -1.96
CPNE3-211ENST00000621526 PPFIBP1Q86W92 1011 aa2.82□□□□□ -1.96
CPNE3-211ENST00000621526 CLEC10AQ8IUN9 316 aa2.82□□□□□ -1.96
CPNE3-211ENST00000621526 TMEFF1Q8IYR6 380 aa2.82□□□□□ -1.96
CPNE3-211ENST00000621526 ZNF444Q8N0Y2 327 aaPredicted RBP2.82□□□□□ -1.96
CPNE3-211ENST00000621526 PJA1Q8NG27 643 aa2.82□□□□□ -1.96
CPNE3-211ENST00000621526 PPP1R13LQ8WUF5 828 aa2.82□□□□□ -1.96
CPNE3-211ENST00000621526 GLG1Q92896 1179 aa2.82□□□□□ -1.96
CPNE3-211ENST00000621526 GATA6Q92908 595 aa2.82□□□□□ -1.96
CPNE3-211ENST00000621526 DDRGK1Q96HY6 314 aa2.82□□□□□ -1.96
CPNE3-211ENST00000621526 LOXL4Q96JB6 756 aa2.82□□□□□ -1.96
CPNE3-211ENST00000621526 PURBQ96QR8 312 aaKnown RBP2.82□□□□□ -1.96
CPNE3-211ENST00000621526 C16orf70Q9BSU1 422 aa2.82□□□□□ -1.96
CPNE3-211ENST00000621526 ALG1Q9BT22 464 aa2.82□□□□□ -1.96
CPNE3-211ENST00000621526 IER2Q9BTL4 223 aa2.82□□□□□ -1.96
CPNE3-211ENST00000621526 MYL10Q9BUA6 226 aa2.82□□□□□ -1.96
CPNE3-211ENST00000621526 USP26Q9BXU7 913 aa2.82□□□□□ -1.96
CPNE3-211ENST00000621526 PCGF6Q9BYE7 350 aa2.82□□□□□ -1.96
CPNE3-211ENST00000621526 TUT1Q9H6E5 874 aaKnown RBP2.82□□□□□ -1.96
CPNE3-211ENST00000621526 MKNK2Q9HBH9 465 aa2.82□□□□□ -1.96
CPNE3-211ENST00000621526 HOMER2Q9NSB8 354 aa2.82□□□□□ -1.96
CPNE3-211ENST00000621526 SPATA6Q9NWH7 488 aaPredicted RBP2.82□□□□□ -1.96
CPNE3-211ENST00000621526 MTMR4Q9NYA4 1195 aa2.82□□□□□ -1.96
CPNE3-211ENST00000621526 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP2.82□□□□□ -1.96
CPNE3-211ENST00000621526 HCFC2Q9Y5Z7 792 aa2.82□□□□□ -1.96
CPNE3-211ENST00000621526 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.82□□□□□ -1.96
CPNE3-211ENST00000621526 ZFP37Q9Y6Q3 630 aaPredicted RBP2.82□□□□□ -1.96
CPNE3-211ENST00000621526 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP2.82□□□□□ -1.96
CPNE3-211ENST00000621526 FPGT-TNNI3KV9GXZ4 949 aa2.82□□□□□ -1.96
CPNE3-211ENST00000621526 MYH3P11055 1940 aa2.81□□□□□ -1.96
CPNE3-211ENST00000621526 CNOT1A5YKK6 2376 aaKnown RBP2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms