RNA–Protein interactions for RNA: ENST00000621396.4

CBWD3-216, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-216ENST00000621396 SMC2O95347 1197 aa17.8■□□□□ 0.44
CBWD3-216ENST00000621396 ASIC1P78348 528 aa17.8■□□□□ 0.44
CBWD3-216ENST00000621396 MORC3Q14149 939 aa17.8■□□□□ 0.44
CBWD3-216ENST00000621396 KLHL10Q6JEL2 608 aa17.8■□□□□ 0.44
CBWD3-216ENST00000621396 AOPEPQ8N6M6 819 aa17.8■□□□□ 0.44
CBWD3-216ENST00000621396 SHCBP1Q8NEM2 672 aa17.8■□□□□ 0.44
CBWD3-216ENST00000621396 GTF3C2Q8WUA4 911 aaPredicted RBP17.8■□□□□ 0.44
CBWD3-216ENST00000621396 DDX12PQ92771 950 aa17.8■□□□□ 0.44
CBWD3-216ENST00000621396 GPRASP2Q96D09 838 aa17.8■□□□□ 0.44
CBWD3-216ENST00000621396 LXNQ9BS40 222 aa17.8■□□□□ 0.44
CBWD3-216ENST00000621396 NT5C3AQ9H0P0 336 aa17.8■□□□□ 0.44
CBWD3-216ENST00000621396 BHMT2Q9H2M3 363 aa17.8■□□□□ 0.44
CBWD3-216ENST00000621396 PDGFCQ9NRA1 345 aa17.8■□□□□ 0.44
CBWD3-216ENST00000621396 GDAQ9Y2T3 454 aa17.8■□□□□ 0.44
CBWD3-216ENST00000621396 TLR2O60603 784 aa17.79■□□□□ 0.44
CBWD3-216ENST00000621396 PLA2G4BP0C869 781 aa17.79■□□□□ 0.44
CBWD3-216ENST00000621396 CD44P16070 742 aaKnown RBP17.79■□□□□ 0.44
CBWD3-216ENST00000621396 EDNRBP24530 442 aa17.79■□□□□ 0.44
CBWD3-216ENST00000621396 UGCGQ16739 394 aa17.79■□□□□ 0.44
CBWD3-216ENST00000621396 GNPTABQ3T906 1256 aa17.79■□□□□ 0.44
CBWD3-216ENST00000621396 KMT5BQ4FZB7 885 aa17.79■□□□□ 0.44
CBWD3-216ENST00000621396 HSP90AA4PQ58FG1 418 aa17.79■□□□□ 0.44
CBWD3-216ENST00000621396 HYIQ5T013 277 aa17.79■□□□□ 0.44
CBWD3-216ENST00000621396 XRRA1Q6P2D8 792 aa17.79■□□□□ 0.44
CBWD3-216ENST00000621396 DPP9Q86TI2 863 aa17.79■□□□□ 0.44
CBWD3-216ENST00000621396 TBC1D22BQ9NU19 505 aa17.79■□□□□ 0.44
CBWD3-216ENST00000621396 KIAA1217Q5T5P2 1943 aa17.79■□□□□ 0.44
CBWD3-216ENST00000621396 DOCK5Q9H7D0 1870 aa17.79■□□□□ 0.44
CBWD3-216ENST00000621396 KDM3AQ9Y4C1 1321 aa17.79■□□□□ 0.44
CBWD3-216ENST00000621396 SPATA31C2B4DYI2 1134 aa17.79■□□□□ 0.44
CBWD3-216ENST00000621396 ARIH2O95376 493 aa17.79■□□□□ 0.44
CBWD3-216ENST00000621396 IDEP14735 1019 aa17.79■□□□□ 0.44
CBWD3-216ENST00000621396 DHX40Q8IX18 779 aaKnown RBP17.79■□□□□ 0.44
CBWD3-216ENST00000621396 TRMT44Q8IYL2 757 aaKnown RBP17.79■□□□□ 0.44
CBWD3-216ENST00000621396 STK17AQ9UEE5 414 aa17.79■□□□□ 0.44
CBWD3-216ENST00000621396 MCM3APO60318 1980 aa17.79■□□□□ 0.44
CBWD3-216ENST00000621396 AP5Z1O43299 807 aa17.78■□□□□ 0.44
CBWD3-216ENST00000621396 KLRC4O43908 158 aa17.78■□□□□ 0.44
CBWD3-216ENST00000621396 COPB2P35606 906 aa17.78■□□□□ 0.44
CBWD3-216ENST00000621396 IQCB1Q15051 598 aa17.78■□□□□ 0.44
CBWD3-216ENST00000621396 DEFB115Q30KQ5 88 aa17.78■□□□□ 0.44
CBWD3-216ENST00000621396 GSDMAQ96QA5 445 aa17.78■□□□□ 0.44
CBWD3-216ENST00000621396 DNM3Q9UQ16 869 aa17.78■□□□□ 0.44
CBWD3-216ENST00000621396 ZNFX1Q9P2E3 1918 aaKnown RBP17.78■□□□□ 0.44
CBWD3-216ENST00000621396 DOCK3Q8IZD9 2030 aa17.78■□□□□ 0.44
CBWD3-216ENST00000621396 GJC2Q5T442 439 aaPredicted RBP17.78■□□□□ 0.44
CBWD3-216ENST00000621396 CUEDC2Q9H467 287 aa17.78■□□□□ 0.44
CBWD3-216ENST00000621396 BMP2KQ9NSY1 1161 aaPredicted RBP17.78■□□□□ 0.44
CBWD3-216ENST00000621396 TCEAL9Q9UHQ7 104 aa17.78■□□□□ 0.44
CBWD3-216ENST00000621396 ADGRA2Q96PE1 1338 aa17.77■□□□□ 0.44
CBWD3-216ENST00000621396 UBA1P22314 1058 aaKnown RBP17.77■□□□□ 0.44
CBWD3-216ENST00000621396 SLC12A3P55017 1021 aa17.77■□□□□ 0.44
CBWD3-216ENST00000621396 STX17P56962 302 aa17.77■□□□□ 0.44
CBWD3-216ENST00000621396 EPHA7Q15375 998 aa17.77■□□□□ 0.44
CBWD3-216ENST00000621396 ARSHQ5FYA8 562 aa17.77■□□□□ 0.44
CBWD3-216ENST00000621396 UTP14CQ5TAP6 766 aaKnown RBP17.77■□□□□ 0.44
CBWD3-216ENST00000621396 C17orf99Q6UX52 265 aa17.77■□□□□ 0.44
CBWD3-216ENST00000621396 GPBP1Q86WP2 473 aa17.77■□□□□ 0.44
CBWD3-216ENST00000621396 COPS5Q92905 334 aa17.77■□□□□ 0.44
CBWD3-216ENST00000621396 CAPNS2Q96L46 248 aa17.77■□□□□ 0.44
CBWD3-216ENST00000621396 POLR3CQ9BUI4 534 aaPredicted RBP17.77■□□□□ 0.44
CBWD3-216ENST00000621396 JPH1Q9HDC5 661 aaPredicted RBP17.77■□□□□ 0.44
CBWD3-216ENST00000621396 INHBEP58166 350 aa17.77■□□□□ 0.43
CBWD3-216ENST00000621396 SREBF2Q12772 1141 aa17.77■□□□□ 0.43
CBWD3-216ENST00000621396 ZNF792Q3KQV3 632 aa17.77■□□□□ 0.43
CBWD3-216ENST00000621396 L1TD1Q5T7N2 865 aaKnown RBP17.77■□□□□ 0.43
CBWD3-216ENST00000621396 ARMCX2Q7L311 632 aa17.77■□□□□ 0.43
CBWD3-216ENST00000621396 PLEKHH3Q7Z736 793 aa17.77■□□□□ 0.43
CBWD3-216ENST00000621396 GLIS3Q8NEA6 775 aa17.77■□□□□ 0.43
CBWD3-216ENST00000621396 MED15Q96RN5 788 aa17.77■□□□□ 0.43
CBWD3-216ENST00000621396 TBC1D7Q9P0N9 293 aa17.77■□□□□ 0.43
CBWD3-216ENST00000621396 BECN2A8MW95 431 aa17.76■□□□□ 0.43
CBWD3-216ENST00000621396 CYP11B2P19099 503 aa17.76■□□□□ 0.43
CBWD3-216ENST00000621396 CTGFP29279 349 aa17.76■□□□□ 0.43
CBWD3-216ENST00000621396 NPLOC4Q8TAT6 608 aa17.76■□□□□ 0.43
CBWD3-216ENST00000621396 C7orf25Q9BPX7 421 aa17.76■□□□□ 0.43
CBWD3-216ENST00000621396 ZHX3Q9H4I2 956 aa17.76■□□□□ 0.43
CBWD3-216ENST00000621396 SFI1A8K8P3 1242 aa17.76■□□□□ 0.43
CBWD3-216ENST00000621396 MAFGO15525 162 aa17.76■□□□□ 0.43
CBWD3-216ENST00000621396 TM4SF4P48230 202 aa17.76■□□□□ 0.43
CBWD3-216ENST00000621396 AMPD3Q01432 767 aa17.76■□□□□ 0.43
CBWD3-216ENST00000621396 STK4Q13043 487 aa17.76■□□□□ 0.43
CBWD3-216ENST00000621396 GRB14Q14449 540 aa17.76■□□□□ 0.43
CBWD3-216ENST00000621396 SWSAP1Q6NVH7 229 aa17.76■□□□□ 0.43
CBWD3-216ENST00000621396 MAEAQ7L5Y9 396 aa17.76■□□□□ 0.43
CBWD3-216ENST00000621396 RUSC1Q9BVN2 902 aa17.76■□□□□ 0.43
CBWD3-216ENST00000621396 ARHGAP39Q9C0H5 1083 aa17.76■□□□□ 0.43
CBWD3-216ENST00000621396 ZFYVE28Q9HCC9 887 aa17.76■□□□□ 0.43
CBWD3-216ENST00000621396 SLC39A2Q9NP94 309 aa17.76■□□□□ 0.43
CBWD3-216ENST00000621396 SLC9A2Q9UBY0 812 aa17.76■□□□□ 0.43
CBWD3-216ENST00000621396 STRNO43815 780 aa17.75■□□□□ 0.43
CBWD3-216ENST00000621396 STAM2O75886 525 aa17.75■□□□□ 0.43
CBWD3-216ENST00000621396 ACTR2P61160 394 aa17.75■□□□□ 0.43
CBWD3-216ENST00000621396 DNAJC19Q96DA6 116 aa17.75■□□□□ 0.43
CBWD3-216ENST00000621396 RSPH10B2B2RC85 870 aa17.74■□□□□ 0.43
CBWD3-216ENST00000621396 TBC1D8O95759 1140 aa17.74■□□□□ 0.43
CBWD3-216ENST00000621396 RSPH10BP0C881 870 aa17.74■□□□□ 0.43
CBWD3-216ENST00000621396 MAPK4P31152 587 aa17.74■□□□□ 0.43
CBWD3-216ENST00000621396 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.74■□□□□ 0.43
CBWD3-216ENST00000621396 CCDC60Q8IWA6 550 aaPredicted RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms