RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 TJAP1Q5JTD0 557 aa27.48■■□□□ 1.99
ATXN3-253ENST00000621269 DBF4BQ8NFT6 615 aa27.48■■□□□ 1.99
ATXN3-253ENST00000621269 THEGQ9P2T0 379 aa27.48■■□□□ 1.99
ATXN3-253ENST00000621269 TET1Q8NFU7 2136 aa27.47■■□□□ 1.99
ATXN3-253ENST00000621269 ARHGEF15O94989 841 aa27.47■■□□□ 1.99
ATXN3-253ENST00000621269 GJB5O95377 273 aa27.47■■□□□ 1.99
ATXN3-253ENST00000621269 LMBR1Q8WVP7 490 aa27.47■■□□□ 1.99
ATXN3-253ENST00000621269 ATXN2LQ8WWM7 1075 aaKnown RBP27.47■■□□□ 1.99
ATXN3-253ENST00000621269 GLG1Q92896 1179 aa27.47■■□□□ 1.99
ATXN3-253ENST00000621269 JAKMIP1Q96N16 626 aaKnown RBP27.47■■□□□ 1.99
ATXN3-253ENST00000621269 RAD9AQ99638 391 aa27.47■■□□□ 1.99
ATXN3-253ENST00000621269 GLT8D2Q9H1C3 349 aa27.47■■□□□ 1.99
ATXN3-253ENST00000621269 CHD7Q9P2D1 2997 aa27.47■■□□□ 1.99
ATXN3-253ENST00000621269 CCDC196A0A1B0GTZ2 297 aa27.46■■□□□ 1.99
ATXN3-253ENST00000621269 GSTTP1A0A1W2PQM5 241 aa27.46■■□□□ 1.99
ATXN3-253ENST00000621269 SMCO2A6NFE2 343 aa27.46■■□□□ 1.99
ATXN3-253ENST00000621269 STXBP3O00186 592 aa27.46■■□□□ 1.99
ATXN3-253ENST00000621269 AMHP03971 560 aa27.46■■□□□ 1.99
ATXN3-253ENST00000621269 CTSHP09668 335 aa27.46■■□□□ 1.99
ATXN3-253ENST00000621269 TYW1BQ6NUM6 668 aa27.46■■□□□ 1.99
ATXN3-253ENST00000621269 SEPT8Q92599 483 aa27.46■■□□□ 1.99
ATXN3-253ENST00000621269 MXRA8Q9BRK3 442 aa27.46■■□□□ 1.99
ATXN3-253ENST00000621269 BARHL2Q9NY43 387 aa27.46■■□□□ 1.99
ATXN3-253ENST00000621269 ERAP1Q9NZ08 941 aa27.46■■□□□ 1.99
ATXN3-253ENST00000621269 DOCK5Q9H7D0 1870 aa27.46■■□□□ 1.99
ATXN3-253ENST00000621269 LCHNA4D1U4 455 aa27.45■■□□□ 1.98
ATXN3-253ENST00000621269 CPA1P15085 419 aa27.45■■□□□ 1.98
ATXN3-253ENST00000621269 CDC27P30260 824 aa27.45■■□□□ 1.98
ATXN3-253ENST00000621269 HSPA4P34932 840 aa27.45■■□□□ 1.98
ATXN3-253ENST00000621269 METAP2P50579 478 aaKnown RBP eCLIP27.45■■□□□ 1.98
ATXN3-253ENST00000621269 PLEKHG4Q58EX7 1191 aa27.45■■□□□ 1.98
ATXN3-253ENST00000621269 FAM117BQ6P1L5 589 aa27.45■■□□□ 1.98
ATXN3-253ENST00000621269 Q6ZUG5 572 aa27.45■■□□□ 1.98
ATXN3-253ENST00000621269 KCNB2Q92953 911 aa27.45■■□□□ 1.98
ATXN3-253ENST00000621269 SMARCAD1Q9H4L7 1026 aa27.45■■□□□ 1.98
ATXN3-253ENST00000621269 FAM217BQ9NTX9 383 aaPredicted RBP27.45■■□□□ 1.98
ATXN3-253ENST00000621269 EPOPA6NHQ4 379 aa27.44■■□□□ 1.98
ATXN3-253ENST00000621269 POU3F3P20264 500 aaPredicted RBP27.44■■□□□ 1.98
ATXN3-253ENST00000621269 ADAM17P78536 824 aa27.44■■□□□ 1.98
ATXN3-253ENST00000621269 APOBRQ0VD83 1088 aa27.44■■□□□ 1.98
ATXN3-253ENST00000621269 BLOC1S2Q6QNY1 142 aa27.44■■□□□ 1.98
ATXN3-253ENST00000621269 LIN28BQ6ZN17 250 aaKnown RBP eCLIP27.44■■□□□ 1.98
ATXN3-253ENST00000621269 PGBD1Q96JS3 809 aa27.44■■□□□ 1.98
ATXN3-253ENST00000621269 ANO3Q9BYT9 981 aa27.44■■□□□ 1.98
ATXN3-253ENST00000621269 JPH1Q9HDC5 661 aaPredicted RBP27.44■■□□□ 1.98
ATXN3-253ENST00000621269 KCNH7Q9NS40 1196 aa27.44■■□□□ 1.98
ATXN3-253ENST00000621269 SNX14Q9Y5W7 946 aa27.44■■□□□ 1.98
ATXN3-253ENST00000621269 MTCH2Q9Y6C9 303 aa27.44■■□□□ 1.98
ATXN3-253ENST00000621269 MARK3P27448 753 aa27.43■■□□□ 1.98
ATXN3-253ENST00000621269 ADD1P35611 737 aaKnown RBP27.43■■□□□ 1.98
ATXN3-253ENST00000621269 MRPS5P82675 430 aaKnown RBP27.43■■□□□ 1.98
ATXN3-253ENST00000621269 PPFIA1Q13136 1202 aa27.43■■□□□ 1.98
ATXN3-253ENST00000621269 BRF1Q92994 677 aa27.43■■□□□ 1.98
ATXN3-253ENST00000621269 SDF4Q9BRK5 362 aa27.43■■□□□ 1.98
ATXN3-253ENST00000621269 SLC9A2Q9UBY0 812 aa27.43■■□□□ 1.98
ATXN3-253ENST00000621269 REC8O95072 547 aa27.42■■□□□ 1.98
ATXN3-253ENST00000621269 AP3B2Q13367 1082 aa27.42■■□□□ 1.98
ATXN3-253ENST00000621269 SKIV2LQ15477 1246 aaKnown RBP27.42■■□□□ 1.98
ATXN3-253ENST00000621269 TAF2Q6P1X5 1199 aa27.42■■□□□ 1.98
ATXN3-253ENST00000621269 MYOCDQ8IZQ8 938 aa27.42■■□□□ 1.98
ATXN3-253ENST00000621269 CYP2W1Q8TAV3 490 aa27.42■■□□□ 1.98
ATXN3-253ENST00000621269 ASB2Q96Q27 587 aa27.42■■□□□ 1.98
ATXN3-253ENST00000621269 AZI2Q9H6S1 392 aa27.42■■□□□ 1.98
ATXN3-253ENST00000621269 TMEM260Q9NX78 707 aa27.42■■□□□ 1.98
ATXN3-253ENST00000621269 RBAK-RBAKDNI3L0D1 243 aa27.41■■□□□ 1.98
ATXN3-253ENST00000621269 ZNF76P36508 570 aa27.41■■□□□ 1.98
ATXN3-253ENST00000621269 GRIK4Q16099 956 aa27.41■■□□□ 1.98
ATXN3-253ENST00000621269 PFKFB3Q16875 520 aaPredicted RBP27.41■■□□□ 1.98
ATXN3-253ENST00000621269 CEP55Q53EZ4 464 aa27.41■■□□□ 1.98
ATXN3-253ENST00000621269 FAM26DQ5JW98 314 aa27.41■■□□□ 1.98
ATXN3-253ENST00000621269 RSPH3Q86UC2 560 aa27.41■■□□□ 1.98
ATXN3-253ENST00000621269 INSL6Q9Y581 213 aa27.41■■□□□ 1.98
ATXN3-253ENST00000621269 PTPRSQ13332 1948 aa27.41■■□□□ 1.98
ATXN3-253ENST00000621269 PSMA5P28066 241 aa27.4■■□□□ 1.98
ATXN3-253ENST00000621269 GRB10Q13322 594 aa27.4■■□□□ 1.98
ATXN3-253ENST00000621269 IL27Q8NEV9 243 aa27.4■■□□□ 1.98
ATXN3-253ENST00000621269 APBB2Q92870 758 aa27.4■■□□□ 1.98
ATXN3-253ENST00000621269 TNPO1Q92973 898 aaKnown RBP27.4■■□□□ 1.98
ATXN3-253ENST00000621269 TGS1Q96RS0 853 aaKnown RBP27.4■■□□□ 1.98
ATXN3-253ENST00000621269 TUBE1Q9UJT0 475 aa27.4■■□□□ 1.98
ATXN3-253ENST00000621269 NFASCO94856 1347 aa27.4■■□□□ 1.98
ATXN3-253ENST00000621269 ARP10275 920 aa27.39■■□□□ 1.98
ATXN3-253ENST00000621269 SCG2P13521 617 aa27.39■■□□□ 1.98
ATXN3-253ENST00000621269 RPS6KB1P23443 525 aa27.39■■□□□ 1.98
ATXN3-253ENST00000621269 SREBF1P36956 1147 aa27.39■■□□□ 1.98
ATXN3-253ENST00000621269 CLK2P49760 499 aaKnown RBP27.39■■□□□ 1.98
ATXN3-253ENST00000621269 MKRN4PQ13434 485 aaPredicted RBP27.39■■□□□ 1.98
ATXN3-253ENST00000621269 RUFY4Q6ZNE9 571 aa27.39■■□□□ 1.98
ATXN3-253ENST00000621269 SPRED2Q7Z698 418 aa27.39■■□□□ 1.98
ATXN3-253ENST00000621269 RPAINQ86UA6 219 aa27.39■■□□□ 1.98
ATXN3-253ENST00000621269 MTUS1Q9ULD2 1270 aa27.39■■□□□ 1.98
ATXN3-253ENST00000621269 LINC01553A4QN01 128 aa27.38■■□□□ 1.97
ATXN3-253ENST00000621269 IGBP1P78318 339 aa27.38■■□□□ 1.97
ATXN3-253ENST00000621269 KRT40Q6A162 431 aa27.38■■□□□ 1.97
ATXN3-253ENST00000621269 CCDC12Q8WUD4 166 aaPredicted RBP27.38■■□□□ 1.97
ATXN3-253ENST00000621269 IFIH1Q9BYX4 1025 aaKnown RBP27.38■■□□□ 1.97
ATXN3-253ENST00000621269 OSBPL7Q9BZF2 842 aa27.38■■□□□ 1.97
ATXN3-253ENST00000621269 AGO4Q9HCK5 861 aaKnown RBP27.38■■□□□ 1.97
ATXN3-253ENST00000621269 RRN3P2A6NIE6 340 aa27.37■■□□□ 1.97
ATXN3-253ENST00000621269 MEIS1O00470 390 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms