RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 TMEM87BQ96K49 555 aa11.33□□□□□ -0.6
VPS11-207ENST00000620429 RPS6KC1Q96S38 1066 aa11.33□□□□□ -0.6
VPS11-207ENST00000620429 MTRQ99707 1265 aa11.33□□□□□ -0.6
VPS11-207ENST00000620429 SGIP1Q9BQI5 828 aa11.33□□□□□ -0.6
VPS11-207ENST00000620429 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.33□□□□□ -0.6
VPS11-207ENST00000620429 FAM192AQ9GZU8 254 aa11.33□□□□□ -0.6
VPS11-207ENST00000620429 UBA5Q9GZZ9 404 aa11.33□□□□□ -0.6
VPS11-207ENST00000620429 FAM217BQ9NTX9 383 aaPredicted RBP11.33□□□□□ -0.6
VPS11-207ENST00000620429 TUBGCP4Q9UGJ1 667 aa11.33□□□□□ -0.6
VPS11-207ENST00000620429 PHF20L1A8MW92 1017 aa11.33□□□□□ -0.6
VPS11-207ENST00000620429 ACTN4O43707 911 aaKnown RBP11.33□□□□□ -0.6
VPS11-207ENST00000620429 HSPA9P38646 679 aaKnown RBP11.33□□□□□ -0.6
VPS11-207ENST00000620429 MCAMP43121 646 aa11.33□□□□□ -0.6
VPS11-207ENST00000620429 AFMP43652 599 aa11.33□□□□□ -0.6
VPS11-207ENST00000620429 NCALDP61601 193 aa11.33□□□□□ -0.6
VPS11-207ENST00000620429 ATP11AP98196 1134 aa11.33□□□□□ -0.6
VPS11-207ENST00000620429 SMIM5Q71RC9 77 aa11.33□□□□□ -0.6
VPS11-207ENST00000620429 TRPM8Q7Z2W7 1104 aa11.33□□□□□ -0.6
VPS11-207ENST00000620429 RMDN2Q96LZ7 410 aa11.33□□□□□ -0.6
VPS11-207ENST00000620429 JADE2Q9NQC1 790 aa11.33□□□□□ -0.6
VPS11-207ENST00000620429 AGAP1Q9UPQ3 857 aa11.33□□□□□ -0.6
VPS11-207ENST00000620429 PCDHB6Q9Y5E3 794 aa11.33□□□□□ -0.6
VPS11-207ENST00000620429 MYH13Q9UKX3 1938 aa11.32□□□□□ -0.6
VPS11-207ENST00000620429 MMP1P03956 469 aa11.32□□□□□ -0.6
VPS11-207ENST00000620429 FAM153BP0C7A2 387 aa11.32□□□□□ -0.6
VPS11-207ENST00000620429 FAM200BP0CF97 657 aa11.32□□□□□ -0.6
VPS11-207ENST00000620429 TMOD1P28289 359 aa11.32□□□□□ -0.6
VPS11-207ENST00000620429 GUCY1A2P33402 732 aa11.32□□□□□ -0.6
VPS11-207ENST00000620429 PCK1P35558 622 aa11.32□□□□□ -0.6
VPS11-207ENST00000620429 CRKLP46109 303 aaKnown RBP11.32□□□□□ -0.6
VPS11-207ENST00000620429 LACTBP83111 547 aaPredicted RBP11.32□□□□□ -0.6
VPS11-207ENST00000620429 FAM153CQ494X1 144 aa11.32□□□□□ -0.6
VPS11-207ENST00000620429 RILPL1Q5EBL4 403 aa11.32□□□□□ -0.6
VPS11-207ENST00000620429 SUSD4Q5VX71 490 aa11.32□□□□□ -0.6
VPS11-207ENST00000620429 C8orf74Q6P047 294 aa11.32□□□□□ -0.6
VPS11-207ENST00000620429 RUFY4Q6ZNE9 571 aa11.32□□□□□ -0.6
VPS11-207ENST00000620429 CCDC82Q8N4S0 544 aa11.32□□□□□ -0.6
VPS11-207ENST00000620429 IGDCC4Q8TDY8 1250 aa11.32□□□□□ -0.6
VPS11-207ENST00000620429 NOC3LQ8WTT2 800 aaKnown RBP11.32□□□□□ -0.6
VPS11-207ENST00000620429 DYDC1Q8WWB3 177 aa11.32□□□□□ -0.6
VPS11-207ENST00000620429 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.32□□□□□ -0.6
VPS11-207ENST00000620429 WASF1Q92558 559 aa11.32□□□□□ -0.6
VPS11-207ENST00000620429 PRCCQ92733 491 aaPredicted RBP11.32□□□□□ -0.6
VPS11-207ENST00000620429 KCNN1Q92952 543 aa11.32□□□□□ -0.6
VPS11-207ENST00000620429 LY9Q9HBG7 655 aa11.32□□□□□ -0.6
VPS11-207ENST00000620429 TMOD4Q9NZQ9 345 aa11.32□□□□□ -0.6
VPS11-207ENST00000620429 FAM153AQ9UHL3 310 aa11.32□□□□□ -0.6
VPS11-207ENST00000620429 PLAAQ9Y263 795 aa11.32□□□□□ -0.6
VPS11-207ENST00000620429 SLC12A7Q9Y666 1083 aa11.32□□□□□ -0.6
VPS11-207ENST00000620429 EIF4E1BA6NMX2 242 aaKnown RBP11.32□□□□□ -0.6
VPS11-207ENST00000620429 USO1O60763 962 aaKnown RBP11.32□□□□□ -0.6
VPS11-207ENST00000620429 CD44P16070 742 aaKnown RBP11.32□□□□□ -0.6
VPS11-207ENST00000620429 IL6STP40189 918 aaPredicted RBP11.32□□□□□ -0.6
VPS11-207ENST00000620429 RFC5P40937 340 aa11.32□□□□□ -0.6
VPS11-207ENST00000620429 PHEXP78562 749 aa11.32□□□□□ -0.6
VPS11-207ENST00000620429 BTG3Q14201 252 aaPredicted RBP11.32□□□□□ -0.6
VPS11-207ENST00000620429 KBTBD12Q3ZCT8 623 aa11.32□□□□□ -0.6
VPS11-207ENST00000620429 IRGCQ6NXR0 463 aa11.32□□□□□ -0.6
VPS11-207ENST00000620429 ZBTB8BQ8NAP8 495 aaPredicted RBP11.32□□□□□ -0.6
VPS11-207ENST00000620429 CHP1Q99653 195 aa11.32□□□□□ -0.6
VPS11-207ENST00000620429 CSRNP2Q9H175 543 aa11.32□□□□□ -0.6
VPS11-207ENST00000620429 ARHGEF3Q9NR81 526 aa11.32□□□□□ -0.6
VPS11-207ENST00000620429 ATP8A2Q9NTI2 1148 aa11.32□□□□□ -0.6
VPS11-207ENST00000620429 ECM29Q5VYK3 1845 aa11.32□□□□□ -0.6
VPS11-207ENST00000620429 HIP1RO75146 1068 aa11.31□□□□□ -0.6
VPS11-207ENST00000620429 RARAP10276 462 aa11.31□□□□□ -0.6
VPS11-207ENST00000620429 CASP1P29466 404 aa11.31□□□□□ -0.6
VPS11-207ENST00000620429 MSH2P43246 934 aa11.31□□□□□ -0.6
VPS11-207ENST00000620429 NR5A1Q13285 461 aa11.31□□□□□ -0.6
VPS11-207ENST00000620429 ERMARDQ5T6L9 678 aa11.31□□□□□ -0.6
VPS11-207ENST00000620429 FOXB2Q5VYV0 432 aa11.31□□□□□ -0.6
VPS11-207ENST00000620429 SMYD4Q8IYR2 804 aaPredicted RBP11.31□□□□□ -0.6
VPS11-207ENST00000620429 ZNF34Q8IZ26 560 aa11.31□□□□□ -0.6
VPS11-207ENST00000620429 VGLL2Q8N8G2 317 aa11.31□□□□□ -0.6
VPS11-207ENST00000620429 SPATA20Q8TB22 786 aa11.31□□□□□ -0.6
VPS11-207ENST00000620429 ARPC5LQ9BPX5 153 aa11.31□□□□□ -0.6
VPS11-207ENST00000620429 PCDH18Q9HCL0 1135 aa11.31□□□□□ -0.6
VPS11-207ENST00000620429 NFU1Q9UMS0 254 aa11.31□□□□□ -0.6
VPS11-207ENST00000620429 SRPRBQ9Y5M8 271 aaKnown RBP11.31□□□□□ -0.6
VPS11-207ENST00000620429 DOT1LQ8TEK3 1739 aa11.31□□□□□ -0.6
VPS11-207ENST00000620429 STK36Q9NRP7 1315 aa11.31□□□□□ -0.6
VPS11-207ENST00000620429 F8VZ95 297 aa11.31□□□□□ -0.6
VPS11-207ENST00000620429 RNF225M0QZC1 329 aaPredicted RBP11.31□□□□□ -0.6
VPS11-207ENST00000620429 CEP104O60308 925 aa11.31□□□□□ -0.6
VPS11-207ENST00000620429 PDE8AO60658 829 aa11.31□□□□□ -0.6
VPS11-207ENST00000620429 IDH1O75874 414 aaKnown RBP11.31□□□□□ -0.6
VPS11-207ENST00000620429 KRT9P35527 623 aa11.31□□□□□ -0.6
VPS11-207ENST00000620429 CCT6AP40227 531 aaKnown RBP11.31□□□□□ -0.6
VPS11-207ENST00000620429 PHKA1P46020 1223 aa11.31□□□□□ -0.6
VPS11-207ENST00000620429 CARSP49589 748 aaKnown RBP11.31□□□□□ -0.6
VPS11-207ENST00000620429 BPIFB4P59827 614 aa11.31□□□□□ -0.6
VPS11-207ENST00000620429 MYBPC2Q14324 1141 aa11.31□□□□□ -0.6
VPS11-207ENST00000620429 TRIM22Q8IYM9 498 aa11.31□□□□□ -0.6
VPS11-207ENST00000620429 PROM2Q8N271 834 aa11.31□□□□□ -0.6
VPS11-207ENST00000620429 ARHGAP18Q8N392 663 aa11.31□□□□□ -0.6
VPS11-207ENST00000620429 SDR16C5Q8N3Y7 309 aa11.31□□□□□ -0.6
VPS11-207ENST00000620429 ZNF579Q8NAF0 562 aaKnown RBP11.31□□□□□ -0.6
VPS11-207ENST00000620429 SMC1BQ8NDV3 1235 aa11.31□□□□□ -0.6
VPS11-207ENST00000620429 NUP88Q99567 741 aaPredicted RBP11.31□□□□□ -0.6
VPS11-207ENST00000620429 BRD8Q9H0E9 1235 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms