RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 ERO1AQ96HE7 468 aa9.03□□□□□ -0.96
CPNE3-209ENST00000620393 APBA2Q99767 749 aa9.03□□□□□ -0.96
CPNE3-209ENST00000620393 SDF4Q9BRK5 362 aa9.03□□□□□ -0.96
CPNE3-209ENST00000620393 MMTAG2Q9BU76 263 aaKnown RBP9.03□□□□□ -0.96
CPNE3-209ENST00000620393 MFRPQ9BY79 579 aa9.03□□□□□ -0.96
CPNE3-209ENST00000620393 PANK2Q9BZ23 570 aa9.03□□□□□ -0.96
CPNE3-209ENST00000620393 KATNBL1Q9H079 304 aa9.03□□□□□ -0.96
CPNE3-209ENST00000620393 ABHD16BQ9H3Z7 469 aa9.03□□□□□ -0.96
CPNE3-209ENST00000620393 VTA1Q9NP79 307 aa9.03□□□□□ -0.96
CPNE3-209ENST00000620393 PKD2L1Q9P0L9 805 aa9.03□□□□□ -0.96
CPNE3-209ENST00000620393 SRRDQ9UH36 339 aa9.03□□□□□ -0.96
CPNE3-209ENST00000620393 DDX41Q9UJV9 622 aaKnown RBP9.03□□□□□ -0.96
CPNE3-209ENST00000620393 GABRQQ9UN88 632 aa9.03□□□□□ -0.96
CPNE3-209ENST00000620393 PP2D1A8MPX8 630 aa9.02□□□□□ -0.97
CPNE3-209ENST00000620393 EML1O00423 815 aa9.02□□□□□ -0.97
CPNE3-209ENST00000620393 POLR2DO15514 142 aaKnown RBP9.02□□□□□ -0.97
CPNE3-209ENST00000620393 NR1I2O75469 434 aa9.02□□□□□ -0.97
CPNE3-209ENST00000620393 TXLNAP40222 546 aa9.02□□□□□ -0.97
CPNE3-209ENST00000620393 KRT76Q01546 638 aa9.02□□□□□ -0.97
CPNE3-209ENST00000620393 PRKCZQ05513 592 aa9.02□□□□□ -0.97
CPNE3-209ENST00000620393 ACVR2BQ13705 512 aa9.02□□□□□ -0.97
CPNE3-209ENST00000620393 TTLL4Q14679 1199 aa9.02□□□□□ -0.97
CPNE3-209ENST00000620393 CCL14Q16627 93 aa9.02□□□□□ -0.97
CPNE3-209ENST00000620393 FBXO16Q8IX29 292 aaPredicted RBP9.02□□□□□ -0.97
CPNE3-209ENST00000620393 TRMT44Q8IYL2 757 aaKnown RBP9.02□□□□□ -0.97
CPNE3-209ENST00000620393 RDM1Q8NG50 284 aa9.02□□□□□ -0.97
CPNE3-209ENST00000620393 ERMNQ8TAM6 284 aa9.02□□□□□ -0.97
CPNE3-209ENST00000620393 CD99L2Q8TCZ2 262 aa9.02□□□□□ -0.97
CPNE3-209ENST00000620393 ZNF296Q8WUU4 475 aaPredicted RBP9.02□□□□□ -0.97
CPNE3-209ENST00000620393 TIGD1Q96MW7 591 aa9.02□□□□□ -0.97
CPNE3-209ENST00000620393 HSD17B14Q9BPX1 270 aa9.02□□□□□ -0.97
CPNE3-209ENST00000620393 PYM1Q9BRP8 204 aaKnown RBP9.02□□□□□ -0.97
CPNE3-209ENST00000620393 POLR3CQ9BUI4 534 aaPredicted RBP9.02□□□□□ -0.97
CPNE3-209ENST00000620393 UNC45AQ9H3U1 944 aa9.02□□□□□ -0.97
CPNE3-209ENST00000620393 BCAS3Q9H6U6 928 aa9.02□□□□□ -0.97
CPNE3-209ENST00000620393 PDGFCQ9NRA1 345 aa9.02□□□□□ -0.97
CPNE3-209ENST00000620393 DACT1Q9NYF0 836 aa9.02□□□□□ -0.97
CPNE3-209ENST00000620393 FLRT1Q9NZU1 646 aa9.02□□□□□ -0.97
CPNE3-209ENST00000620393 CCDC39Q9UFE4 941 aa9.02□□□□□ -0.97
CPNE3-209ENST00000620393 USP25Q9UHP3 1055 aa9.02□□□□□ -0.97
CPNE3-209ENST00000620393 COL11A1P12107 1806 aaPredicted RBP9.02□□□□□ -0.97
CPNE3-209ENST00000620393 A0A087X0B3 334 aa9.01□□□□□ -0.97
CPNE3-209ENST00000620393 DDX39AO00148 427 aaKnown RBP9.01□□□□□ -0.97
CPNE3-209ENST00000620393 SLITRK3O94933 977 aa9.01□□□□□ -0.97
CPNE3-209ENST00000620393 ATG7O95352 703 aa9.01□□□□□ -0.97
CPNE3-209ENST00000620393 ARIH2O95376 493 aa9.01□□□□□ -0.97
CPNE3-209ENST00000620393 CCNE2O96020 404 aa9.01□□□□□ -0.97
CPNE3-209ENST00000620393 TXNP10599 105 aaKnown RBP9.01□□□□□ -0.97
CPNE3-209ENST00000620393 RPA1P27694 616 aa9.01□□□□□ -0.97
CPNE3-209ENST00000620393 SFNP31947 248 aa9.01□□□□□ -0.97
CPNE3-209ENST00000620393 CYP2C19P33261 490 aa9.01□□□□□ -0.97
CPNE3-209ENST00000620393 PRMT2P55345 433 aa9.01□□□□□ -0.97
CPNE3-209ENST00000620393 KARSQ15046 597 aaKnown RBP9.01□□□□□ -0.97
CPNE3-209ENST00000620393 LY6KQ17RY6 165 aa9.01□□□□□ -0.97
CPNE3-209ENST00000620393 LONRF3Q496Y0 759 aa9.01□□□□□ -0.97
CPNE3-209ENST00000620393 PRAMEF19Q5SWL8 479 aa9.01□□□□□ -0.97
CPNE3-209ENST00000620393 CELF3Q5SZQ8 465 aaKnown RBP9.01□□□□□ -0.97
CPNE3-209ENST00000620393 HYIQ5T013 277 aa9.01□□□□□ -0.97
CPNE3-209ENST00000620393 RRAGBQ5VZM2 374 aa9.01□□□□□ -0.97
CPNE3-209ENST00000620393 MFSD14CQ5VZR4 134 aa9.01□□□□□ -0.97
CPNE3-209ENST00000620393 NCAPH2Q6IBW4 605 aa9.01□□□□□ -0.97
CPNE3-209ENST00000620393 ZNF746Q6NUN9 644 aaPredicted RBP9.01□□□□□ -0.97
CPNE3-209ENST00000620393 CYFIP1Q7L576 1253 aa9.01□□□□□ -0.97
CPNE3-209ENST00000620393 MIER3Q7Z3K6 550 aa9.01□□□□□ -0.97
CPNE3-209ENST00000620393 ELOA2Q8IYF1 753 aaPredicted RBP9.01□□□□□ -0.97
CPNE3-209ENST00000620393 ZNF710Q8N1W2 664 aa9.01□□□□□ -0.97
CPNE3-209ENST00000620393 KCTD17Q8N5Z5 321 aa9.01□□□□□ -0.97
CPNE3-209ENST00000620393 IQUBQ8NA54 791 aa9.01□□□□□ -0.97
CPNE3-209ENST00000620393 MARVELD3Q96A59 401 aa9.01□□□□□ -0.97
CPNE3-209ENST00000620393 CALML4Q96GE6 196 aa9.01□□□□□ -0.97
CPNE3-209ENST00000620393 PNMA5Q96PV4 448 aa9.01□□□□□ -0.97
CPNE3-209ENST00000620393 EIF2AK1Q9BQI3 630 aaKnown RBP9.01□□□□□ -0.97
CPNE3-209ENST00000620393 MLXIPQ9HAP2 919 aa9.01□□□□□ -0.97
CPNE3-209ENST00000620393 JPH1Q9HDC5 661 aaPredicted RBP9.01□□□□□ -0.97
CPNE3-209ENST00000620393 DISC1Q9NRI5 854 aa9.01□□□□□ -0.97
CPNE3-209ENST00000620393 DDX19AQ9NUU7 478 aaKnown RBP9.01□□□□□ -0.97
CPNE3-209ENST00000620393 SLC9A2Q9UBY0 812 aa9.01□□□□□ -0.97
CPNE3-209ENST00000620393 NRBP1Q9UHY1 535 aa9.01□□□□□ -0.97
CPNE3-209ENST00000620393 WDR64B1ANS9 1081 aa9□□□□□ -0.97
CPNE3-209ENST00000620393 CHMP2AO43633 222 aa9□□□□□ -0.97
CPNE3-209ENST00000620393 KINO60870 393 aaKnown RBP9□□□□□ -0.97
CPNE3-209ENST00000620393 MED24O75448 989 aa9□□□□□ -0.97
CPNE3-209ENST00000620393 GGPS1O95749 300 aa9□□□□□ -0.97
CPNE3-209ENST00000620393 P4HBP07237 508 aaKnown RBP9□□□□□ -0.97
CPNE3-209ENST00000620393 SLFN14P0C7P3 912 aa9□□□□□ -0.97
CPNE3-209ENST00000620393 ZNF865P0CJ78 1059 aaPredicted RBP9□□□□□ -0.97
CPNE3-209ENST00000620393 SPATA31C1P0DKV0 1188 aa9□□□□□ -0.97
CPNE3-209ENST00000620393 MUTP22033 750 aa9□□□□□ -0.97
CPNE3-209ENST00000620393 UBA1P22314 1058 aaKnown RBP9□□□□□ -0.97
CPNE3-209ENST00000620393 CCT6AP40227 531 aaKnown RBP9□□□□□ -0.97
CPNE3-209ENST00000620393 JAK3P52333 1124 aa9□□□□□ -0.97
CPNE3-209ENST00000620393 GRB10Q13322 594 aa9□□□□□ -0.97
CPNE3-209ENST00000620393 LAMC2Q13753 1193 aa9□□□□□ -0.97
CPNE3-209ENST00000620393 ZRSR1Q15695 479 aaKnown RBP9□□□□□ -0.97
CPNE3-209ENST00000620393 E2F4Q16254 413 aa9□□□□□ -0.97
CPNE3-209ENST00000620393 ECM1Q16610 540 aa9□□□□□ -0.97
CPNE3-209ENST00000620393 HAUS3Q68CZ6 603 aa9□□□□□ -0.97
CPNE3-209ENST00000620393 KANK3Q6NY19 840 aa9□□□□□ -0.97
CPNE3-209ENST00000620393 METTL7BQ6UX53 244 aa9□□□□□ -0.97
CPNE3-209ENST00000620393 ABHD15Q6UXT9 468 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms