RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 JPH1Q9HDC5 661 aaPredicted RBP9.39□□□□□ -0.91
NEK3-209ENST00000618856 TRMT13Q9NUP7 481 aaKnown RBP9.39□□□□□ -0.91
NEK3-209ENST00000618856 PCDH10Q9P2E7 1040 aa9.39□□□□□ -0.91
NEK3-209ENST00000618856 IPO5O00410 1097 aaKnown RBP9.38□□□□□ -0.91
NEK3-209ENST00000618856 PITPNM1O00562 1244 aa9.38□□□□□ -0.91
NEK3-209ENST00000618856 NOP56O00567 594 aaKnown RBP9.38□□□□□ -0.91
NEK3-209ENST00000618856 MSH4O15457 936 aa9.38□□□□□ -0.91
NEK3-209ENST00000618856 ST18O60284 1047 aa9.38□□□□□ -0.91
NEK3-209ENST00000618856 TCF7P36402 384 aaPredicted RBP9.38□□□□□ -0.91
NEK3-209ENST00000618856 EPHB4P54760 987 aa9.38□□□□□ -0.91
NEK3-209ENST00000618856 HMGN5P82970 282 aaKnown RBP9.38□□□□□ -0.91
NEK3-209ENST00000618856 NONOQ15233 471 aaKnown RBP eCLIP9.38□□□□□ -0.91
NEK3-209ENST00000618856 TRIM71Q2Q1W2 868 aaKnown RBP9.38□□□□□ -0.91
NEK3-209ENST00000618856 EARS2Q5JPH6 523 aaKnown RBP9.38□□□□□ -0.91
NEK3-209ENST00000618856 HABP4Q5JVS0 413 aaKnown RBP9.38□□□□□ -0.91
NEK3-209ENST00000618856 GDF6Q6KF10 455 aaPredicted RBP9.38□□□□□ -0.91
NEK3-209ENST00000618856 C16orf59Q7L2K0 433 aa9.38□□□□□ -0.91
NEK3-209ENST00000618856 PLPPR4Q7Z2D5 763 aa9.38□□□□□ -0.91
NEK3-209ENST00000618856 PLA2G4DQ86XP0 818 aa9.38□□□□□ -0.91
NEK3-209ENST00000618856 CCDC83Q8IWF9 413 aa9.38□□□□□ -0.91
NEK3-209ENST00000618856 ETNPPLQ8TBG4 499 aa9.38□□□□□ -0.91
NEK3-209ENST00000618856 AFAP1L1Q8TED9 768 aa9.38□□□□□ -0.91
NEK3-209ENST00000618856 DHX38Q92620 1227 aaKnown RBP9.38□□□□□ -0.91
NEK3-209ENST00000618856 SLC5A5Q92911 643 aa9.38□□□□□ -0.91
NEK3-209ENST00000618856 TMX3Q96JJ7 454 aa9.38□□□□□ -0.91
NEK3-209ENST00000618856 WNT8AQ9H1J5 351 aa9.38□□□□□ -0.91
NEK3-209ENST00000618856 TBC1D22BQ9NU19 505 aa9.38□□□□□ -0.91
NEK3-209ENST00000618856 HDAC6Q9UBN7 1215 aa9.38□□□□□ -0.91
NEK3-209ENST00000618856 SLC9A2Q9UBY0 812 aa9.38□□□□□ -0.91
NEK3-209ENST00000618856 PRKAG2Q9UGJ0 569 aa9.38□□□□□ -0.91
NEK3-209ENST00000618856 TRIOBPQ9H2D6 2365 aa9.37□□□□□ -0.91
NEK3-209ENST00000618856 UMODL1Q5DID0 1318 aa9.37□□□□□ -0.91
NEK3-209ENST00000618856 SORBS3O60504 671 aa9.37□□□□□ -0.91
NEK3-209ENST00000618856 PSMD10O75832 226 aa9.37□□□□□ -0.91
NEK3-209ENST00000618856 RAG1P15918 1043 aa9.37□□□□□ -0.91
NEK3-209ENST00000618856 ZNF76P36508 570 aa9.37□□□□□ -0.91
NEK3-209ENST00000618856 ACTR2P61160 394 aa9.37□□□□□ -0.91
NEK3-209ENST00000618856 MDM2Q00987 491 aaPredicted RBP9.37□□□□□ -0.91
NEK3-209ENST00000618856 NR5A1Q13285 461 aa9.37□□□□□ -0.91
NEK3-209ENST00000618856 GPNMBQ14956 572 aa9.37□□□□□ -0.91
NEK3-209ENST00000618856 LRIT3Q3SXY7 679 aa9.37□□□□□ -0.91
NEK3-209ENST00000618856 PRR16Q569H4 304 aa9.37□□□□□ -0.91
NEK3-209ENST00000618856 RASIP1Q5U651 963 aa9.37□□□□□ -0.91
NEK3-209ENST00000618856 KRT40Q6A162 431 aa9.37□□□□□ -0.91
NEK3-209ENST00000618856 ZNF746Q6NUN9 644 aaPredicted RBP9.37□□□□□ -0.91
NEK3-209ENST00000618856 TRAF7Q6Q0C0 670 aa9.37□□□□□ -0.91
NEK3-209ENST00000618856 SERINC5Q86VE9 423 aa9.37□□□□□ -0.91
NEK3-209ENST00000618856 TRIM50Q86XT4 487 aa9.37□□□□□ -0.91
NEK3-209ENST00000618856 C7orf31Q8N865 590 aa9.37□□□□□ -0.91
NEK3-209ENST00000618856 FBXO18Q8NFZ0 1043 aa9.37□□□□□ -0.91
NEK3-209ENST00000618856 RIT2Q99578 217 aa9.37□□□□□ -0.91
NEK3-209ENST00000618856 SDF4Q9BRK5 362 aa9.37□□□□□ -0.91
NEK3-209ENST00000618856 ZNF577Q9BSK1 485 aa9.37□□□□□ -0.91
NEK3-209ENST00000618856 RNPEPQ9H4A4 650 aa9.37□□□□□ -0.91
NEK3-209ENST00000618856 KCNMB3Q9NPA1 279 aa9.37□□□□□ -0.91
NEK3-209ENST00000618856 PRDM5Q9NQX1 630 aaPredicted RBP9.37□□□□□ -0.91
NEK3-209ENST00000618856 ERAP1Q9NZ08 941 aa9.37□□□□□ -0.91
NEK3-209ENST00000618856 MBLAC1A4D2B0 266 aaPredicted RBP9.36□□□□□ -0.91
NEK3-209ENST00000618856 BTBD18B2RXH4 712 aa9.36□□□□□ -0.91
NEK3-209ENST00000618856 TDP2O95551 362 aa9.36□□□□□ -0.91
NEK3-209ENST00000618856 SMIM10L2AP0DMW4 78 aa9.36□□□□□ -0.91
NEK3-209ENST00000618856 SMIM10L2BP0DMW5 78 aa9.36□□□□□ -0.91
NEK3-209ENST00000618856 CYP2C9P11712 490 aa9.36□□□□□ -0.91
NEK3-209ENST00000618856 GCFC2P16383 781 aaKnown RBP9.36□□□□□ -0.91
NEK3-209ENST00000618856 CYP2C18P33260 490 aa9.36□□□□□ -0.91
NEK3-209ENST00000618856 KRT2P35908 639 aa9.36□□□□□ -0.91
NEK3-209ENST00000618856 SLC26A2P50443 739 aa9.36□□□□□ -0.91
NEK3-209ENST00000618856 KRT76Q01546 638 aa9.36□□□□□ -0.91
NEK3-209ENST00000618856 FPGSQ05932 587 aa9.36□□□□□ -0.91
NEK3-209ENST00000618856 PTK7Q13308 1070 aa9.36□□□□□ -0.91
NEK3-209ENST00000618856 CUL4AQ13619 759 aa9.36□□□□□ -0.91
NEK3-209ENST00000618856 PTGISQ16647 500 aa9.36□□□□□ -0.91
NEK3-209ENST00000618856 INF2Q27J81 1249 aa9.36□□□□□ -0.91
NEK3-209ENST00000618856 MARCH8Q5T0T0 291 aa9.36□□□□□ -0.91
NEK3-209ENST00000618856 NEK8Q86SG6 692 aa9.36□□□□□ -0.91
NEK3-209ENST00000618856 RPAINQ86UA6 219 aa9.36□□□□□ -0.91
NEK3-209ENST00000618856 SMAP1Q8IYB5 467 aaPredicted RBP9.36□□□□□ -0.91
NEK3-209ENST00000618856 DIS3L2Q8IYB7 885 aaKnown RBP9.36□□□□□ -0.91
NEK3-209ENST00000618856 TDHQ8IZJ6 230 aa9.36□□□□□ -0.91
NEK3-209ENST00000618856 CAGE1Q8TC20 777 aa9.36□□□□□ -0.91
NEK3-209ENST00000618856 PPP1R13LQ8WUF5 828 aa9.36□□□□□ -0.91
NEK3-209ENST00000618856 WNT8BQ93098 351 aa9.36□□□□□ -0.91
NEK3-209ENST00000618856 LBHD1Q9BQE6 289 aaPredicted RBP9.36□□□□□ -0.91
NEK3-209ENST00000618856 UBE2OQ9C0C9 1292 aaKnown RBP9.36□□□□□ -0.91
NEK3-209ENST00000618856 HIPK3Q9H422 1215 aa9.36□□□□□ -0.91
NEK3-209ENST00000618856 SMARCAD1Q9H4L7 1026 aa9.36□□□□□ -0.91
NEK3-209ENST00000618856 PKD2L1Q9P0L9 805 aa9.36□□□□□ -0.91
NEK3-209ENST00000618856 ZNF215Q9UL58 517 aaPredicted RBP9.36□□□□□ -0.91
NEK3-209ENST00000618856 MAFBQ9Y5Q3 323 aaPredicted RBP9.36□□□□□ -0.91
NEK3-209ENST00000618856 TANC1Q9C0D5 1861 aa9.36□□□□□ -0.91
NEK3-209ENST00000618856 NRCAMQ92823 1304 aa9.35□□□□□ -0.91
NEK3-209ENST00000618856 CHD9Q3L8U1 2897 aa9.35□□□□□ -0.91
NEK3-209ENST00000618856 CCDC194A0A1B0GVG4 234 aa9.35□□□□□ -0.91
NEK3-209ENST00000618856 FAM205CA6NFA0 338 aa9.35□□□□□ -0.91
NEK3-209ENST00000618856 TBX3O15119 743 aa9.35□□□□□ -0.91
NEK3-209ENST00000618856 SLC37A4O43826 429 aa9.35□□□□□ -0.91
NEK3-209ENST00000618856 CAND2O75155 1236 aa9.35□□□□□ -0.91
NEK3-209ENST00000618856 IQCF3P0C7M6 154 aa9.35□□□□□ -0.91
NEK3-209ENST00000618856 CSF2RAP15509 400 aa9.35□□□□□ -0.91
NEK3-209ENST00000618856 ATP4AP20648 1035 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms