RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 PLIN5Q00G26 463 aa16.12■□□□□ 0.17
COL5A1-208ENST00000618395 ADRM1Q16186 407 aa16.12■□□□□ 0.17
COL5A1-208ENST00000618395 LRRC36Q1X8D7 754 aa16.12■□□□□ 0.17
COL5A1-208ENST00000618395 FRA10AC1Q70Z53 315 aa16.12■□□□□ 0.17
COL5A1-208ENST00000618395 MYCT1Q8N699 235 aa16.12■□□□□ 0.17
COL5A1-208ENST00000618395 CYGBQ8WWM9 190 aa16.12■□□□□ 0.17
COL5A1-208ENST00000618395 PHF21AQ96BD5 680 aa16.12■□□□□ 0.17
COL5A1-208ENST00000618395 USP28Q96RU2 1077 aa16.12■□□□□ 0.17
COL5A1-208ENST00000618395 KIF24Q5T7B8 1368 aa16.12■□□□□ 0.17
COL5A1-208ENST00000618395 TRIM67Q6ZTA4 783 aa16.11■□□□□ 0.17
COL5A1-208ENST00000618395 UBE2Q1Q7Z7E8 422 aa16.11■□□□□ 0.17
COL5A1-208ENST00000618395 TMOD4Q9NZQ9 345 aa16.11■□□□□ 0.17
COL5A1-208ENST00000618395 ZMYM3Q14202 1370 aa16.11■□□□□ 0.17
COL5A1-208ENST00000618395 FANCD2Q9BXW9 1451 aa16.11■□□□□ 0.17
COL5A1-208ENST00000618395 PRPF6O94906 941 aaKnown RBP16.11■□□□□ 0.17
COL5A1-208ENST00000618395 UBTFL6P0CB48 400 aaPredicted RBP16.11■□□□□ 0.17
COL5A1-208ENST00000618395 SOX6P35712 828 aa16.11■□□□□ 0.17
COL5A1-208ENST00000618395 ZNF473Q8WTR7 871 aaKnown RBP16.11■□□□□ 0.17
COL5A1-208ENST00000618395 MTERF3Q96E29 417 aa16.11■□□□□ 0.17
COL5A1-208ENST00000618395 TIAM1Q13009 1591 aa16.11■□□□□ 0.17
COL5A1-208ENST00000618395 PI4KAP2A4QPH2 592 aa16.11■□□□□ 0.17
COL5A1-208ENST00000618395 SPOPLQ6IQ16 392 aa16.11■□□□□ 0.17
COL5A1-208ENST00000618395 PI4KAP1Q8N8J0 262 aa16.11■□□□□ 0.17
COL5A1-208ENST00000618395 SKA2Q8WVK7 121 aaPredicted RBP16.11■□□□□ 0.17
COL5A1-208ENST00000618395 MOV10L1Q9BXT6 1211 aaKnown RBP16.11■□□□□ 0.17
COL5A1-208ENST00000618395 KPNA4O00629 521 aaPredicted RBP16.11■□□□□ 0.17
COL5A1-208ENST00000618395 USHBP1Q8N6Y0 703 aa16.11■□□□□ 0.17
COL5A1-208ENST00000618395 LRRC39Q96DD0 335 aa16.11■□□□□ 0.17
COL5A1-208ENST00000618395 SGSM3Q96HU1 749 aa16.11■□□□□ 0.17
COL5A1-208ENST00000618395 CYP4F11Q9HBI6 524 aa16.11■□□□□ 0.17
COL5A1-208ENST00000618395 ARMCX3Q9UH62 379 aaPredicted RBP16.11■□□□□ 0.17
COL5A1-208ENST00000618395 H7C0C1 242 aa16.11■□□□□ 0.17
COL5A1-208ENST00000618395 CCDC188H7C350 402 aa16.11■□□□□ 0.17
COL5A1-208ENST00000618395 RNF113AO15541 343 aaKnown RBP16.11■□□□□ 0.17
COL5A1-208ENST00000618395 ATP5OP48047 213 aa16.11■□□□□ 0.17
COL5A1-208ENST00000618395 KBTBD12Q3ZCT8 623 aa16.11■□□□□ 0.17
COL5A1-208ENST00000618395 POTEAQ6S8J7 498 aa16.11■□□□□ 0.17
COL5A1-208ENST00000618395 GPR141Q7Z602 305 aa16.11■□□□□ 0.17
COL5A1-208ENST00000618395 TRMT112Q9UI30 125 aaKnown RBP16.11■□□□□ 0.17
COL5A1-208ENST00000618395 CFAP69A5D8W1 941 aa16.11■□□□□ 0.17
COL5A1-208ENST00000618395 TMEM247A6NEH6 219 aa16.11■□□□□ 0.17
COL5A1-208ENST00000618395 COPEO14579 308 aa16.11■□□□□ 0.17
COL5A1-208ENST00000618395 HSPA13P48723 471 aa16.11■□□□□ 0.17
COL5A1-208ENST00000618395 GLT8D2Q9H1C3 349 aa16.11■□□□□ 0.17
COL5A1-208ENST00000618395 SLC40A1Q9NP59 571 aa16.11■□□□□ 0.17
COL5A1-208ENST00000618395 HPS5Q9UPZ3 1129 aa16.11■□□□□ 0.17
COL5A1-208ENST00000618395 KDM3AQ9Y4C1 1321 aa16.11■□□□□ 0.17
COL5A1-208ENST00000618395 DDHD2O94830 711 aa16.11■□□□□ 0.17
COL5A1-208ENST00000618395 KITP10721 976 aa16.11■□□□□ 0.17
COL5A1-208ENST00000618395 CPA1P15085 419 aa16.11■□□□□ 0.17
COL5A1-208ENST00000618395 TTC25Q96NG3 672 aa16.11■□□□□ 0.17
COL5A1-208ENST00000618395 MBIPQ9NS73 344 aa16.11■□□□□ 0.17
COL5A1-208ENST00000618395 KRT37O76014 449 aa16.1■□□□□ 0.17
COL5A1-208ENST00000618395 ANP32DO95626 131 aa16.1■□□□□ 0.17
COL5A1-208ENST00000618395 CROCCP3Q8IVE0 287 aa16.1■□□□□ 0.17
COL5A1-208ENST00000618395 CALML6Q8TD86 181 aa16.1■□□□□ 0.17
COL5A1-208ENST00000618395 C9orf84Q5VXU9 1444 aa16.1■□□□□ 0.17
COL5A1-208ENST00000618395 B4DLN1 442 aa16.1■□□□□ 0.17
COL5A1-208ENST00000618395 MRPL12P52815 198 aaKnown RBP16.1■□□□□ 0.17
COL5A1-208ENST00000618395 NUP107P57740 925 aa16.1■□□□□ 0.17
COL5A1-208ENST00000618395 TRPM8Q7Z2W7 1104 aa16.1■□□□□ 0.17
COL5A1-208ENST00000618395 THEMISQ8N1K5 641 aaPredicted RBP16.1■□□□□ 0.17
COL5A1-208ENST00000618395 NOD2Q9HC29 1040 aa16.1■□□□□ 0.17
COL5A1-208ENST00000618395 TARSL2A2RTX5 802 aaKnown RBP16.1■□□□□ 0.17
COL5A1-208ENST00000618395 ARHGEF35A5YM69 484 aa16.1■□□□□ 0.17
COL5A1-208ENST00000618395 MYO1FO00160 1098 aa16.1■□□□□ 0.17
COL5A1-208ENST00000618395 MESDQ14696 234 aa16.1■□□□□ 0.17
COL5A1-208ENST00000618395 ZFATQ9P243 1243 aa16.1■□□□□ 0.17
COL5A1-208ENST00000618395 DTNBO60941 627 aa16.1■□□□□ 0.17
COL5A1-208ENST00000618395 NDUFA10O95299 355 aa16.1■□□□□ 0.17
COL5A1-208ENST00000618395 CDC27P30260 824 aa16.1■□□□□ 0.17
COL5A1-208ENST00000618395 NDUFA8P51970 172 aa16.1■□□□□ 0.17
COL5A1-208ENST00000618395 SNX14Q9Y5W7 946 aa16.1■□□□□ 0.17
COL5A1-208ENST00000618395 MAGEB6P1A0A0J9YX57 407 aa16.1■□□□□ 0.17
COL5A1-208ENST00000618395 P4HA2O15460 535 aa16.1■□□□□ 0.17
COL5A1-208ENST00000618395 DNAL1Q4LDG9 190 aa16.1■□□□□ 0.17
COL5A1-208ENST00000618395 SYNJ2O15056 1496 aa16.1■□□□□ 0.17
COL5A1-208ENST00000618395 GOLGA8HP0CJ92 632 aa16.1■□□□□ 0.17
COL5A1-208ENST00000618395 ARFIP2P53365 341 aa16.1■□□□□ 0.17
COL5A1-208ENST00000618395 Q4G0T1 1027 aa16.1■□□□□ 0.17
COL5A1-208ENST00000618395 MTRQ99707 1265 aa16.1■□□□□ 0.17
COL5A1-208ENST00000618395 VIPAS39Q9H9C1 493 aa16.1■□□□□ 0.17
COL5A1-208ENST00000618395 MRGBPQ9NV56 204 aa16.1■□□□□ 0.17
COL5A1-208ENST00000618395 ATP6V1B1P15313 513 aa16.09■□□□□ 0.17
COL5A1-208ENST00000618395 PLEKHA7Q6IQ23 1121 aa16.09■□□□□ 0.17
COL5A1-208ENST00000618395 ZBTB18Q99592 522 aa16.09■□□□□ 0.17
COL5A1-208ENST00000618395 OLA1Q9NTK5 396 aaKnown RBP16.09■□□□□ 0.17
COL5A1-208ENST00000618395 FAM135AQ9P2D6 1515 aa16.09■□□□□ 0.17
COL5A1-208ENST00000618395 ARMCX4Q5H9R4 360 aa16.09■□□□□ 0.17
COL5A1-208ENST00000618395 STAG2Q8N3U4 1231 aa16.09■□□□□ 0.17
COL5A1-208ENST00000618395 AGBL1Q96MI9 1066 aa16.09■□□□□ 0.17
COL5A1-208ENST00000618395 ARHGEF3Q9NR81 526 aa16.09■□□□□ 0.17
COL5A1-208ENST00000618395 CMA1P23946 247 aa16.09■□□□□ 0.17
COL5A1-208ENST00000618395 RECQLP46063 649 aaPredicted RBP16.09■□□□□ 0.17
COL5A1-208ENST00000618395 MYOCDQ8IZQ8 938 aa16.09■□□□□ 0.17
COL5A1-208ENST00000618395 BBS2Q9BXC9 721 aa16.09■□□□□ 0.17
COL5A1-208ENST00000618395 AOX1Q06278 1338 aa16.09■□□□□ 0.17
COL5A1-208ENST00000618395 TCP11X1B4DZS4 312 aa16.09■□□□□ 0.17
COL5A1-208ENST00000618395 CD19P15391 556 aa16.09■□□□□ 0.17
COL5A1-208ENST00000618395 LRRC49Q8IUZ0 686 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms