RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 SFSWAPQ12872 951 aaKnown RBP13.36□□□□□ -0.27
SRRT-216ENST00000618262 IQCB1Q15051 598 aa13.36□□□□□ -0.27
SRRT-216ENST00000618262 MAP3K11Q16584 847 aa13.36□□□□□ -0.27
SRRT-216ENST00000618262 EARS2Q5JPH6 523 aaKnown RBP13.36□□□□□ -0.27
SRRT-216ENST00000618262 OTUD6AQ7L8S5 288 aa13.36□□□□□ -0.27
SRRT-216ENST00000618262 SMARCC2Q8TAQ2 1214 aa13.36□□□□□ -0.27
SRRT-216ENST00000618262 EZH1Q92800 747 aaPredicted RBP13.36□□□□□ -0.27
SRRT-216ENST00000618262 MS4A4AQ96JQ5 239 aa13.36□□□□□ -0.27
SRRT-216ENST00000618262 TMEM63CQ9P1W3 806 aa13.36□□□□□ -0.27
SRRT-216ENST00000618262 ATAD5Q96QE3 1844 aa13.36□□□□□ -0.27
SRRT-216ENST00000618262 OTOFQ9HC10 1997 aa13.36□□□□□ -0.27
SRRT-216ENST00000618262 ZNF189O75820 626 aaPredicted RBP13.36□□□□□ -0.27
SRRT-216ENST00000618262 HNRNPH1P31943 449 aaKnown RBP13.36□□□□□ -0.27
SRRT-216ENST00000618262 USP14P54578 494 aa13.36□□□□□ -0.27
SRRT-216ENST00000618262 PPIL2Q13356 520 aa13.36□□□□□ -0.27
SRRT-216ENST00000618262 TRIM29Q14134 588 aa13.36□□□□□ -0.27
SRRT-216ENST00000618262 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.36□□□□□ -0.27
SRRT-216ENST00000618262 RBM46Q8TBY0 533 aaKnown RBP13.36□□□□□ -0.27
SRRT-216ENST00000618262 KIF9Q9HAQ2 790 aa13.36□□□□□ -0.27
SRRT-216ENST00000618262 CPA4Q9UI42 421 aa13.36□□□□□ -0.27
SRRT-216ENST00000618262 CCPG1Q9ULG6 757 aa13.36□□□□□ -0.27
SRRT-216ENST00000618262 A0A0G2JLL6 359 aaPredicted RBP13.35□□□□□ -0.27
SRRT-216ENST00000618262 DEXIO95424 95 aa13.35□□□□□ -0.27
SRRT-216ENST00000618262 ATICP31939 592 aa13.35□□□□□ -0.27
SRRT-216ENST00000618262 ZNF132P52740 706 aa13.35□□□□□ -0.27
SRRT-216ENST00000618262 DEUP1Q05D60 604 aa13.35□□□□□ -0.27
SRRT-216ENST00000618262 Q3C1V9 767 aa13.35□□□□□ -0.27
SRRT-216ENST00000618262 NSMFQ6X4W1 530 aa13.35□□□□□ -0.27
SRRT-216ENST00000618262 PRRT2Q7Z6L0 340 aaPredicted RBP13.35□□□□□ -0.27
SRRT-216ENST00000618262 EXOC4Q96A65 974 aa13.35□□□□□ -0.27
SRRT-216ENST00000618262 INO80BQ9C086 356 aaPredicted RBP13.35□□□□□ -0.27
SRRT-216ENST00000618262 A0A1B0GUA9 196 aa13.35□□□□□ -0.27
SRRT-216ENST00000618262 WDR46O15213 610 aaKnown RBP13.35□□□□□ -0.27
SRRT-216ENST00000618262 E2F6O75461 281 aa13.35□□□□□ -0.27
SRRT-216ENST00000618262 PNMA6AP0CW24 399 aaPredicted RBP13.35□□□□□ -0.27
SRRT-216ENST00000618262 FOSL1P15407 271 aa13.35□□□□□ -0.27
SRRT-216ENST00000618262 TMEM132BQ14DG7 1078 aa13.35□□□□□ -0.27
SRRT-216ENST00000618262 DEFB115Q30KQ5 88 aa13.35□□□□□ -0.27
SRRT-216ENST00000618262 CCDC92Q53HC0 331 aaPredicted RBP13.35□□□□□ -0.27
SRRT-216ENST00000618262 SNRNP48Q6IEG0 339 aaKnown RBP13.35□□□□□ -0.27
SRRT-216ENST00000618262 FAM114A1Q8IWE2 563 aa13.35□□□□□ -0.27
SRRT-216ENST00000618262 KCNN1Q92952 543 aa13.35□□□□□ -0.27
SRRT-216ENST00000618262 SMCO2A6NFE2 343 aa13.35□□□□□ -0.27
SRRT-216ENST00000618262 SPDYE16A6NNV3 312 aaPredicted RBP13.35□□□□□ -0.27
SRRT-216ENST00000618262 NFIBO00712 420 aa13.35□□□□□ -0.27
SRRT-216ENST00000618262 ZBTB5O15062 677 aa13.35□□□□□ -0.27
SRRT-216ENST00000618262 KIF23Q02241 960 aaPredicted RBP13.35□□□□□ -0.27
SRRT-216ENST00000618262 COG2Q14746 738 aa13.35□□□□□ -0.27
SRRT-216ENST00000618262 UBE2Q1Q7Z7E8 422 aa13.35□□□□□ -0.27
SRRT-216ENST00000618262 INTS4Q96HW7 963 aaKnown RBP13.35□□□□□ -0.27
SRRT-216ENST00000618262 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.35□□□□□ -0.27
SRRT-216ENST00000618262 BTBD7Q9P203 1132 aa13.35□□□□□ -0.27
SRRT-216ENST00000618262 MTMR6Q9Y217 621 aa13.35□□□□□ -0.27
SRRT-216ENST00000618262 TLL2Q9Y6L7 1015 aa13.35□□□□□ -0.27
SRRT-216ENST00000618262 BICDL2A1A5D9 508 aa13.34□□□□□ -0.27
SRRT-216ENST00000618262 C19orf81C9J6K1 198 aa13.34□□□□□ -0.27
SRRT-216ENST00000618262 VWA5AO00534 786 aa13.34□□□□□ -0.27
SRRT-216ENST00000618262 PRPF3O43395 683 aaKnown RBP13.34□□□□□ -0.27
SRRT-216ENST00000618262 EIF4BP23588 611 aaKnown RBP13.34□□□□□ -0.27
SRRT-216ENST00000618262 LMAN1P49257 510 aa13.34□□□□□ -0.27
SRRT-216ENST00000618262 GNAQP50148 359 aa13.34□□□□□ -0.27
SRRT-216ENST00000618262 MOGSQ13724 837 aa13.34□□□□□ -0.27
SRRT-216ENST00000618262 PFKFB3Q16875 520 aaPredicted RBP13.34□□□□□ -0.27
SRRT-216ENST00000618262 CATSPERGQ6ZRH7 1159 aa13.34□□□□□ -0.27
SRRT-216ENST00000618262 DIS3L2Q8IYB7 885 aaKnown RBP13.34□□□□□ -0.27
SRRT-216ENST00000618262 CHURC1Q8WUH1 139 aa13.34□□□□□ -0.27
SRRT-216ENST00000618262 LPAR1Q92633 364 aa13.34□□□□□ -0.27
SRRT-216ENST00000618262 MPP4Q96JB8 637 aa13.34□□□□□ -0.27
SRRT-216ENST00000618262 CAPNS2Q96L46 248 aa13.34□□□□□ -0.27
SRRT-216ENST00000618262 RNF26Q9BY78 433 aaPredicted RBP13.34□□□□□ -0.27
SRRT-216ENST00000618262 ATP8A1Q9Y2Q0 1164 aa13.34□□□□□ -0.27
SRRT-216ENST00000618262 ATP6V1G1O75348 118 aa13.34□□□□□ -0.27
SRRT-216ENST00000618262 GPAT2Q6NUI2 795 aa13.34□□□□□ -0.27
SRRT-216ENST00000618262 FBXO11Q86XK2 927 aa13.34□□□□□ -0.27
SRRT-216ENST00000618262 RIOX1Q9H6W3 641 aa13.34□□□□□ -0.27
SRRT-216ENST00000618262 PPP1R9AQ9ULJ8 1098 aa13.34□□□□□ -0.27
SRRT-216ENST00000618262 CALML3P27482 149 aa13.33□□□□□ -0.28
SRRT-216ENST00000618262 MRPL12P52815 198 aaKnown RBP13.33□□□□□ -0.28
SRRT-216ENST00000618262 LAMB3Q13751 1172 aa13.33□□□□□ -0.28
SRRT-216ENST00000618262 C4orf46Q504U0 113 aa13.33□□□□□ -0.28
SRRT-216ENST00000618262 SLC30A10Q6XR72 485 aa13.33□□□□□ -0.28
SRRT-216ENST00000618262 PIK3AP1Q6ZUJ8 805 aa13.33□□□□□ -0.28
SRRT-216ENST00000618262 B4GALNT2Q8NHY0 566 aa13.33□□□□□ -0.28
SRRT-216ENST00000618262 USP33Q8TEY7 942 aa13.33□□□□□ -0.28
SRRT-216ENST00000618262 GJA10Q969M2 543 aa13.33□□□□□ -0.28
SRRT-216ENST00000618262 NACC2Q96BF6 587 aa13.33□□□□□ -0.28
SRRT-216ENST00000618262 TSGA10Q9BZW7 698 aa13.33□□□□□ -0.28
SRRT-216ENST00000618262 FEM1BQ9UK73 627 aa13.33□□□□□ -0.28
SRRT-216ENST00000618262 DOCK1Q14185 1865 aa13.33□□□□□ -0.28
SRRT-216ENST00000618262 DYTNA2CJ06 578 aa13.33□□□□□ -0.28
SRRT-216ENST00000618262 STXBP3O00186 592 aa13.33□□□□□ -0.28
SRRT-216ENST00000618262 WNT7AO00755 349 aa13.33□□□□□ -0.28
SRRT-216ENST00000618262 SORBS3O60504 671 aa13.33□□□□□ -0.28
SRRT-216ENST00000618262 TBC1D8O95759 1140 aa13.33□□□□□ -0.28
SRRT-216ENST00000618262 HERVK_113P62684 666 aa13.33□□□□□ -0.28
SRRT-216ENST00000618262 TMED1Q13445 227 aa13.33□□□□□ -0.28
SRRT-216ENST00000618262 VMP1Q96GC9 406 aa13.33□□□□□ -0.28
SRRT-216ENST00000618262 LLPHQ9BRT6 129 aaKnown RBP13.33□□□□□ -0.28
SRRT-216ENST00000618262 MAPK8IP1Q9UQF2 711 aa13.33□□□□□ -0.28
SRRT-216ENST00000618262 PNMA6FA0A0J9YX94 578 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms