RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 TSG101Q99816 390 aa19.25■□□□□ 0.67
PCDHGC3-205ENST00000617641 NOC4LQ9BVI4 516 aaKnown RBP19.25■□□□□ 0.67
PCDHGC3-205ENST00000617641 RUSC1Q9BVN2 902 aa19.25■□□□□ 0.67
PCDHGC3-205ENST00000617641 WDR11Q9BZH6 1224 aa19.25■□□□□ 0.67
PCDHGC3-205ENST00000617641 RNF181Q9P0P0 153 aa19.25■□□□□ 0.67
PCDHGC3-205ENST00000617641 RIPK3Q9Y572 518 aa19.25■□□□□ 0.67
PCDHGC3-205ENST00000617641 A0A1W2PQC6 194 aa19.25■□□□□ 0.67
PCDHGC3-205ENST00000617641 CCP110O43303 1012 aa19.25■□□□□ 0.67
PCDHGC3-205ENST00000617641 SUPT20HL1Q3ZLR7 823 aa19.25■□□□□ 0.67
PCDHGC3-205ENST00000617641 C12orf42Q96LP6 360 aa19.25■□□□□ 0.67
PCDHGC3-205ENST00000617641 TEKT3Q9BXF9 490 aa19.25■□□□□ 0.67
PCDHGC3-205ENST00000617641 RLFQ13129 1914 aa19.25■□□□□ 0.67
PCDHGC3-205ENST00000617641 COL11A1P12107 1806 aaPredicted RBP19.24■□□□□ 0.67
PCDHGC3-205ENST00000617641 DDX39AO00148 427 aaKnown RBP19.24■□□□□ 0.67
PCDHGC3-205ENST00000617641 EIF2AK2P19525 551 aaKnown RBP19.24■□□□□ 0.67
PCDHGC3-205ENST00000617641 ZCWPW2Q504Y3 356 aa19.24■□□□□ 0.67
PCDHGC3-205ENST00000617641 KRT26Q7Z3Y9 468 aa19.24■□□□□ 0.67
PCDHGC3-205ENST00000617641 SCFD1Q8WVM8 642 aa19.24■□□□□ 0.67
PCDHGC3-205ENST00000617641 CCDC51Q96ER9 411 aa19.24■□□□□ 0.67
PCDHGC3-205ENST00000617641 DESI2Q9BSY9 194 aa19.24■□□□□ 0.67
PCDHGC3-205ENST00000617641 KCNH7Q9NS40 1196 aa19.24■□□□□ 0.67
PCDHGC3-205ENST00000617641 ZBTB39O15060 712 aa19.24■□□□□ 0.67
PCDHGC3-205ENST00000617641 FDX1P10109 184 aa19.24■□□□□ 0.67
PCDHGC3-205ENST00000617641 MRPS9P82933 396 aaKnown RBP19.24■□□□□ 0.67
PCDHGC3-205ENST00000617641 TBC1D8BQ0IIM8 1120 aa19.24■□□□□ 0.67
PCDHGC3-205ENST00000617641 GLIPR1L2Q4G1C9 344 aa19.24■□□□□ 0.67
PCDHGC3-205ENST00000617641 PCNX4Q63HM2 1172 aa19.24■□□□□ 0.67
PCDHGC3-205ENST00000617641 NSMFQ6X4W1 530 aa19.24■□□□□ 0.67
PCDHGC3-205ENST00000617641 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.24■□□□□ 0.67
PCDHGC3-205ENST00000617641 PURBQ96QR8 312 aaKnown RBP19.24■□□□□ 0.67
PCDHGC3-205ENST00000617641 NAA15Q9BXJ9 866 aaKnown RBP19.24■□□□□ 0.67
PCDHGC3-205ENST00000617641 POLD4Q9HCU8 107 aa19.24■□□□□ 0.67
PCDHGC3-205ENST00000617641 ABHD10Q9NUJ1 306 aa19.24■□□□□ 0.67
PCDHGC3-205ENST00000617641 PAXBP1Q9Y5B6 917 aa19.24■□□□□ 0.67
PCDHGC3-205ENST00000617641 RSPH10B2B2RC85 870 aa19.23■□□□□ 0.67
PCDHGC3-205ENST00000617641 C19orf81C9J6K1 198 aa19.23■□□□□ 0.67
PCDHGC3-205ENST00000617641 ZSCAN12O43309 604 aa19.23■□□□□ 0.67
PCDHGC3-205ENST00000617641 USP2O75604 605 aaPredicted RBP19.23■□□□□ 0.67
PCDHGC3-205ENST00000617641 FGFR1OPO95684 399 aaKnown RBP19.23■□□□□ 0.67
PCDHGC3-205ENST00000617641 RSPH10BP0C881 870 aa19.23■□□□□ 0.67
PCDHGC3-205ENST00000617641 TKFCQ3LXA3 575 aa19.23■□□□□ 0.67
PCDHGC3-205ENST00000617641 NOL9Q5SY16 702 aaKnown RBP19.23■□□□□ 0.67
PCDHGC3-205ENST00000617641 B3GNT9Q6UX72 402 aa19.23■□□□□ 0.67
PCDHGC3-205ENST00000617641 RAD9BQ6WBX8 426 aa19.23■□□□□ 0.67
PCDHGC3-205ENST00000617641 SFR1Q86XK3 245 aa19.23■□□□□ 0.67
PCDHGC3-205ENST00000617641 REPS2Q8NFH8 660 aa19.23■□□□□ 0.67
PCDHGC3-205ENST00000617641 RNF146Q9NTX7 359 aa19.23■□□□□ 0.67
PCDHGC3-205ENST00000617641 WRAP73Q9P2S5 460 aaPredicted RBP19.23■□□□□ 0.67
PCDHGC3-205ENST00000617641 UBIAD1Q9Y5Z9 338 aa19.23■□□□□ 0.67
PCDHGC3-205ENST00000617641 FRMPD4Q14CM0 1322 aa19.23■□□□□ 0.67
PCDHGC3-205ENST00000617641 TTC26A0AVF1 554 aa19.23■□□□□ 0.67
PCDHGC3-205ENST00000617641 BCRP11274 1271 aa19.23■□□□□ 0.67
PCDHGC3-205ENST00000617641 KRT9P35527 623 aa19.23■□□□□ 0.67
PCDHGC3-205ENST00000617641 KLK7P49862 253 aa19.23■□□□□ 0.67
PCDHGC3-205ENST00000617641 CASP5P51878 434 aa19.23■□□□□ 0.67
PCDHGC3-205ENST00000617641 RNF207Q6ZRF8 634 aa19.23■□□□□ 0.67
PCDHGC3-205ENST00000617641 RIT2Q99578 217 aa19.23■□□□□ 0.67
PCDHGC3-205ENST00000617641 BCAS3Q9H6U6 928 aa19.23■□□□□ 0.67
PCDHGC3-205ENST00000617641 MAP3K20Q9NYL2 800 aaKnown RBP19.23■□□□□ 0.67
PCDHGC3-205ENST00000617641 KIF2AO00139 706 aaPredicted RBP19.22■□□□□ 0.67
PCDHGC3-205ENST00000617641 ERCC3P19447 782 aa19.22■□□□□ 0.67
PCDHGC3-205ENST00000617641 DSG3P32926 999 aa19.22■□□□□ 0.67
PCDHGC3-205ENST00000617641 EPHA7Q15375 998 aa19.22■□□□□ 0.67
PCDHGC3-205ENST00000617641 SYCP1Q15431 976 aa19.22■□□□□ 0.67
PCDHGC3-205ENST00000617641 FOXR2Q6PJQ5 311 aa19.22■□□□□ 0.67
PCDHGC3-205ENST00000617641 NIPA1Q7RTP0 329 aa19.22■□□□□ 0.67
PCDHGC3-205ENST00000617641 ADARB2Q9NS39 739 aaKnown RBP19.22■□□□□ 0.67
PCDHGC3-205ENST00000617641 PNMA2Q9UL42 364 aa19.22■□□□□ 0.67
PCDHGC3-205ENST00000617641 AFG3L2Q9Y4W6 797 aa19.22■□□□□ 0.67
PCDHGC3-205ENST00000617641 SRCAPQ6ZRS2 3230 aa19.22■□□□□ 0.67
PCDHGC3-205ENST00000617641 TRAF5O00463 557 aa19.22■□□□□ 0.67
PCDHGC3-205ENST00000617641 FECHP22830 423 aa19.22■□□□□ 0.67
PCDHGC3-205ENST00000617641 PGM5Q15124 567 aa19.22■□□□□ 0.67
PCDHGC3-205ENST00000617641 SNRNP48Q6IEG0 339 aaKnown RBP19.22■□□□□ 0.67
PCDHGC3-205ENST00000617641 RINT1Q6NUQ1 792 aa19.22■□□□□ 0.67
PCDHGC3-205ENST00000617641 SYT10Q6XYQ8 523 aa19.22■□□□□ 0.67
PCDHGC3-205ENST00000617641 KCTD17Q8N5Z5 321 aa19.22■□□□□ 0.67
PCDHGC3-205ENST00000617641 SAMD3Q8N6K7 520 aa19.22■□□□□ 0.67
PCDHGC3-205ENST00000617641 RMDN3Q96TC7 470 aa19.22■□□□□ 0.67
PCDHGC3-205ENST00000617641 KCTD10Q9H3F6 313 aa19.22■□□□□ 0.67
PCDHGC3-205ENST00000617641 TMOD4Q9NZQ9 345 aa19.22■□□□□ 0.67
PCDHGC3-205ENST00000617641 ADM5C9JUS6 153 aa19.21■□□□□ 0.67
PCDHGC3-205ENST00000617641 MYCLP12524 364 aaPredicted RBP19.21■□□□□ 0.67
PCDHGC3-205ENST00000617641 FKBP3Q00688 224 aaKnown RBP19.21■□□□□ 0.67
PCDHGC3-205ENST00000617641 ITGB3BPQ13352 177 aaPredicted RBP19.21■□□□□ 0.67
PCDHGC3-205ENST00000617641 VWA3BQ502W6 1294 aa19.21■□□□□ 0.67
PCDHGC3-205ENST00000617641 BANK1Q8NDB2 785 aa19.21■□□□□ 0.67
PCDHGC3-205ENST00000617641 KIF18AQ8NI77 898 aa19.21■□□□□ 0.67
PCDHGC3-205ENST00000617641 AGO4Q9HCK5 861 aaKnown RBP19.21■□□□□ 0.67
PCDHGC3-205ENST00000617641 JADE2Q9NQC1 790 aa19.21■□□□□ 0.67
PCDHGC3-205ENST00000617641 PXMP2Q9NR77 195 aa19.21■□□□□ 0.67
PCDHGC3-205ENST00000617641 RASSF10A6NK89 507 aa19.2■□□□□ 0.66
PCDHGC3-205ENST00000617641 DHX15O43143 795 aaKnown RBP19.2■□□□□ 0.66
PCDHGC3-205ENST00000617641 TBCAO75347 108 aaKnown RBP19.2■□□□□ 0.66
PCDHGC3-205ENST00000617641 YBX3P16989 372 aaKnown RBP eCLIP19.2■□□□□ 0.66
PCDHGC3-205ENST00000617641 GTF2F1P35269 517 aaKnown RBP eCLIP19.2■□□□□ 0.66
PCDHGC3-205ENST00000617641 ERVK-24P63145 666 aa19.2■□□□□ 0.66
PCDHGC3-205ENST00000617641 MTMR1Q13613 665 aa19.2■□□□□ 0.66
PCDHGC3-205ENST00000617641 BAATQ14032 418 aaPredicted RBP19.2■□□□□ 0.66
PCDHGC3-205ENST00000617641 VGLL4Q14135 290 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms