RNA–Protein interactions for RNA: ENST00000617428.2

AC008878.3-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC008878.3, Length 4,964 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008878.3-201ENST00000617428 SCARA5Q6ZMJ2 495 aa20.11■□□□□ 0.81
AC008878.3-201ENST00000617428 NSUN6Q8TEA1 469 aaKnown RBP20.11■□□□□ 0.81
AC008878.3-201ENST00000617428 SCARF1Q14162 830 aa20.1■□□□□ 0.81
AC008878.3-201ENST00000617428 PLCB4Q15147 1175 aa20.1■□□□□ 0.81
AC008878.3-201ENST00000617428 CCNYQ8ND76 341 aa20.1■□□□□ 0.81
AC008878.3-201ENST00000617428 TOB2Q14106 344 aaPredicted RBP20.1■□□□□ 0.81
AC008878.3-201ENST00000617428 TRIM11Q96F44 468 aa20.1■□□□□ 0.81
AC008878.3-201ENST00000617428 ZNF233A6NK53 670 aa20.1■□□□□ 0.81
AC008878.3-201ENST00000617428 MYL3P08590 195 aa20.1■□□□□ 0.81
AC008878.3-201ENST00000617428 PHLDB2Q86SQ0 1253 aa20.1■□□□□ 0.81
AC008878.3-201ENST00000617428 CERKQ8TCT0 537 aa20.1■□□□□ 0.81
AC008878.3-201ENST00000617428 SLC38A10Q9HBR0 1119 aa20.1■□□□□ 0.81
AC008878.3-201ENST00000617428 PTPN22Q9Y2R2 807 aa20.1■□□□□ 0.81
AC008878.3-201ENST00000617428 A0A0G2JLW4 131 aa20.1■□□□□ 0.81
AC008878.3-201ENST00000617428 APOBEC3FQ8IUX4 373 aaKnown RBP20.1■□□□□ 0.81
AC008878.3-201ENST00000617428 ARHGEF2Q92974 986 aaKnown RBP20.1■□□□□ 0.81
AC008878.3-201ENST00000617428 GSG1L2A8MUP6 293 aa20.09■□□□□ 0.81
AC008878.3-201ENST00000617428 FOXO4P98177 505 aa20.09■□□□□ 0.81
AC008878.3-201ENST00000617428 RPS6KA2Q15349 733 aa20.09■□□□□ 0.81
AC008878.3-201ENST00000617428 DNAJC24Q6P3W2 148 aa20.09■□□□□ 0.81
AC008878.3-201ENST00000617428 KSR1Q8IVT5 923 aa20.09■□□□□ 0.81
AC008878.3-201ENST00000617428 GPATCH11Q8N954 259 aa20.09■□□□□ 0.81
AC008878.3-201ENST00000617428 TSC1Q92574 1164 aa20.09■□□□□ 0.81
AC008878.3-201ENST00000617428 POLD4Q9HCU8 107 aa20.09■□□□□ 0.81
AC008878.3-201ENST00000617428 PLEKHG2Q9H7P9 1386 aa20.09■□□□□ 0.81
AC008878.3-201ENST00000617428 GUCY2DQ02846 1103 aa20.09■□□□□ 0.81
AC008878.3-201ENST00000617428 CUL4BQ13620 913 aa20.09■□□□□ 0.81
AC008878.3-201ENST00000617428 OR6B2Q6IFH4 312 aa20.09■□□□□ 0.81
AC008878.3-201ENST00000617428 SLC35F6Q8N357 371 aa20.09■□□□□ 0.81
AC008878.3-201ENST00000617428 FAM81BQ96LP2 452 aa20.09■□□□□ 0.81
AC008878.3-201ENST00000617428 JAK3P52333 1124 aa20.09■□□□□ 0.81
AC008878.3-201ENST00000617428 YWHAGP61981 247 aaKnown RBP eCLIP20.09■□□□□ 0.81
AC008878.3-201ENST00000617428 BBS5Q8N3I7 341 aa20.09■□□□□ 0.81
AC008878.3-201ENST00000617428 PRPF38AQ8NAV1 312 aaKnown RBP20.09■□□□□ 0.81
AC008878.3-201ENST00000617428 TYW1Q9NV66 732 aaKnown RBP20.09■□□□□ 0.81
AC008878.3-201ENST00000617428 PASKQ96RG2 1323 aa20.09■□□□□ 0.81
AC008878.3-201ENST00000617428 NDST4Q9H3R1 872 aa20.08■□□□□ 0.81
AC008878.3-201ENST00000617428 IFT122Q9HBG6 1241 aa20.08■□□□□ 0.81
AC008878.3-201ENST00000617428 XPAP23025 273 aaPredicted RBP20.08■□□□□ 0.81
AC008878.3-201ENST00000617428 ARHGAP4P98171 946 aa20.08■□□□□ 0.81
AC008878.3-201ENST00000617428 BRD3Q15059 726 aa20.08■□□□□ 0.81
AC008878.3-201ENST00000617428 HOMER3Q9NSC5 361 aa20.08■□□□□ 0.81
AC008878.3-201ENST00000617428 C10orf67Q8IYJ2 551 aa20.08■□□□□ 0.8
AC008878.3-201ENST00000617428 SKA2Q8WVK7 121 aaPredicted RBP20.08■□□□□ 0.8
AC008878.3-201ENST00000617428 WDR64B1ANS9 1081 aa20.08■□□□□ 0.8
AC008878.3-201ENST00000617428 SGK1O00141 431 aa20.08■□□□□ 0.8
AC008878.3-201ENST00000617428 OAS2P29728 719 aaKnown RBP20.08■□□□□ 0.8
AC008878.3-201ENST00000617428 DSTYKQ6XUX3 929 aa20.08■□□□□ 0.8
AC008878.3-201ENST00000617428 CCDC13Q8IYE1 715 aa20.08■□□□□ 0.8
AC008878.3-201ENST00000617428 BANK1Q8NDB2 785 aa20.08■□□□□ 0.8
AC008878.3-201ENST00000617428 CALN1Q9BXU9 219 aa20.08■□□□□ 0.8
AC008878.3-201ENST00000617428 QRICH1Q2TAL8 776 aa20.07■□□□□ 0.8
AC008878.3-201ENST00000617428 PPP4R1Q8TF05 950 aa20.07■□□□□ 0.8
AC008878.3-201ENST00000617428 HEXIM2Q96MH2 286 aaKnown RBP20.07■□□□□ 0.8
AC008878.3-201ENST00000617428 GDAQ9Y2T3 454 aa20.07■□□□□ 0.8
AC008878.3-201ENST00000617428 ADCY10Q96PN6 1610 aa20.07■□□□□ 0.8
AC008878.3-201ENST00000617428 ALKQ9UM73 1620 aa20.07■□□□□ 0.8
AC008878.3-201ENST00000617428 ARHGEF37A1IGU5 675 aa20.07■□□□□ 0.8
AC008878.3-201ENST00000617428 PFDN6O15212 129 aa20.07■□□□□ 0.8
AC008878.3-201ENST00000617428 RNF40O75150 1001 aa20.07■□□□□ 0.8
AC008878.3-201ENST00000617428 SLFN12LQ6IEE8 588 aa20.07■□□□□ 0.8
AC008878.3-201ENST00000617428 RYBPQ8N488 228 aaPredicted RBP20.07■□□□□ 0.8
AC008878.3-201ENST00000617428 MED7O43513 233 aa20.07■□□□□ 0.8
AC008878.3-201ENST00000617428 BUB1BO60566 1050 aaPredicted RBP20.07■□□□□ 0.8
AC008878.3-201ENST00000617428 SIX6OS1Q8N1H7 587 aa20.07■□□□□ 0.8
AC008878.3-201ENST00000617428 ALCAMQ13740 583 aa20.07■□□□□ 0.8
AC008878.3-201ENST00000617428 SURF1Q15526 300 aa20.07■□□□□ 0.8
AC008878.3-201ENST00000617428 VPS72Q15906 364 aa20.07■□□□□ 0.8
AC008878.3-201ENST00000617428 SPON1Q9HCB6 807 aa20.07■□□□□ 0.8
AC008878.3-201ENST00000617428 LRRC63Q05C16 580 aa20.06■□□□□ 0.8
AC008878.3-201ENST00000617428 MCPH1Q8NEM0 835 aa20.06■□□□□ 0.8
AC008878.3-201ENST00000617428 MRPL47Q9HD33 250 aaKnown RBP20.06■□□□□ 0.8
AC008878.3-201ENST00000617428 TBC1D22BQ9NU19 505 aa20.06■□□□□ 0.8
AC008878.3-201ENST00000617428 USP31Q70CQ4 1352 aa20.06■□□□□ 0.8
AC008878.3-201ENST00000617428 ABCB11O95342 1321 aa20.06■□□□□ 0.8
AC008878.3-201ENST00000617428 DYNLT1P63172 113 aa20.06■□□□□ 0.8
AC008878.3-201ENST00000617428 OXER1Q8TDS5 423 aa20.06■□□□□ 0.8
AC008878.3-201ENST00000617428 SCYL1Q96KG9 808 aa20.06■□□□□ 0.8
AC008878.3-201ENST00000617428 LY9Q9HBG7 655 aa20.06■□□□□ 0.8
AC008878.3-201ENST00000617428 TMEM260Q9NX78 707 aa20.06■□□□□ 0.8
AC008878.3-201ENST00000617428 AKR1B1P15121 316 aa20.06■□□□□ 0.8
AC008878.3-201ENST00000617428 ZBED6P86452 979 aa20.06■□□□□ 0.8
AC008878.3-201ENST00000617428 MUM1L1Q5H9M0 696 aa20.06■□□□□ 0.8
AC008878.3-201ENST00000617428 PNMA8AQ86V59 439 aaPredicted RBP20.06■□□□□ 0.8
AC008878.3-201ENST00000617428 BBOF1Q8ND07 529 aa20.06■□□□□ 0.8
AC008878.3-201ENST00000617428 TBC1D16Q8TBP0 767 aa20.06■□□□□ 0.8
AC008878.3-201ENST00000617428 TCP11Q8WWU5 503 aa20.06■□□□□ 0.8
AC008878.3-201ENST00000617428 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.06■□□□□ 0.8
AC008878.3-201ENST00000617428 CPSF3Q9UKF6 684 aaKnown RBP20.06■□□□□ 0.8
AC008878.3-201ENST00000617428 EIF4A3P38919 411 aaKnown RBP20.06■□□□□ 0.8
AC008878.3-201ENST00000617428 ARL4AP40617 200 aa20.06■□□□□ 0.8
AC008878.3-201ENST00000617428 ARMCX2Q7L311 632 aa20.06■□□□□ 0.8
AC008878.3-201ENST00000617428 MB21D2Q8IYB1 491 aaPredicted RBP20.06■□□□□ 0.8
AC008878.3-201ENST00000617428 MICAL1Q8TDZ2 1067 aa20.06■□□□□ 0.8
AC008878.3-201ENST00000617428 SLC12A6Q9UHW9 1150 aa20.06■□□□□ 0.8
AC008878.3-201ENST00000617428 PYCARDQ9ULZ3 195 aa20.06■□□□□ 0.8
AC008878.3-201ENST00000617428 ESYT2A0FGR8 921 aa20.05■□□□□ 0.8
AC008878.3-201ENST00000617428 GSTA1P08263 222 aa20.05■□□□□ 0.8
AC008878.3-201ENST00000617428 GSTA2P09210 222 aa20.05■□□□□ 0.8
AC008878.3-201ENST00000617428 ELF1P32519 619 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms