RNA–Protein interactions for RNA: ENST00000617270.4

RFX3-212, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFX3, Length 9,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-212ENST00000617270 PRKAG2Q9UGJ0 569 aa6.46□□□□□ -1.37
RFX3-212ENST00000617270 JRKLQ9Y4A0 524 aa6.46□□□□□ -1.37
RFX3-212ENST00000617270 RNMTO43148 476 aaKnown RBP6.46□□□□□ -1.37
RFX3-212ENST00000617270 ORC4O43929 436 aa6.46□□□□□ -1.37
RFX3-212ENST00000617270 NBNO60934 754 aa6.46□□□□□ -1.37
RFX3-212ENST00000617270 TMCC1O94876 653 aa6.46□□□□□ -1.37
RFX3-212ENST00000617270 WDR47O94967 919 aa6.46□□□□□ -1.37
RFX3-212ENST00000617270 DEPDC1Q5TB30 811 aa6.46□□□□□ -1.37
RFX3-212ENST00000617270 PATL1Q86TB9 770 aaKnown RBP6.46□□□□□ -1.37
RFX3-212ENST00000617270 MCF2L2Q86YR7 1114 aa6.46□□□□□ -1.37
RFX3-212ENST00000617270 CRLF3Q8IUI8 442 aa6.46□□□□□ -1.37
RFX3-212ENST00000617270 SPICE1Q8N0Z3 855 aa6.46□□□□□ -1.37
RFX3-212ENST00000617270 RBM46Q8TBY0 533 aaKnown RBP6.46□□□□□ -1.37
RFX3-212ENST00000617270 SLC7A3Q8WY07 619 aa6.46□□□□□ -1.37
RFX3-212ENST00000617270 METTL22Q9BUU2 404 aaPredicted RBP6.46□□□□□ -1.37
RFX3-212ENST00000617270 F5H423 210 aaPredicted RBP6.46□□□□□ -1.38
RFX3-212ENST00000617270 XPOTO43592 962 aaKnown RBP6.46□□□□□ -1.38
RFX3-212ENST00000617270 AFPP02771 609 aaKnown RBP6.46□□□□□ -1.38
RFX3-212ENST00000617270 ME3Q16798 604 aa6.46□□□□□ -1.38
RFX3-212ENST00000617270 NUGGCQ68CJ6 796 aa6.46□□□□□ -1.38
RFX3-212ENST00000617270 FAM47EQ6ZV65 393 aa6.46□□□□□ -1.38
RFX3-212ENST00000617270 ARMC9Q7Z3E5 817 aa6.46□□□□□ -1.38
RFX3-212ENST00000617270 DPP9Q86TI2 863 aa6.46□□□□□ -1.38
RFX3-212ENST00000617270 STX19Q8N4C7 294 aa6.46□□□□□ -1.38
RFX3-212ENST00000617270 CACTINQ8WUQ7 758 aaKnown RBP6.46□□□□□ -1.38
RFX3-212ENST00000617270 SARS2Q9NP81 518 aaKnown RBP6.46□□□□□ -1.38
RFX3-212ENST00000617270 NOP53Q9NZM5 478 aaKnown RBP6.46□□□□□ -1.38
RFX3-212ENST00000617270 A0A087WUV0 522 aaPredicted RBP6.46□□□□□ -1.38
RFX3-212ENST00000617270 STAT2P52630 851 aa6.46□□□□□ -1.38
RFX3-212ENST00000617270 GTF2IP78347 998 aa6.46□□□□□ -1.38
RFX3-212ENST00000617270 LRRC41Q15345 812 aa6.46□□□□□ -1.38
RFX3-212ENST00000617270 NBPF10Q6P3W6 841 aaKnown RBP6.46□□□□□ -1.38
RFX3-212ENST00000617270 G2E3Q7L622 706 aa6.46□□□□□ -1.38
RFX3-212ENST00000617270 SMYD4Q8IYR2 804 aaPredicted RBP6.46□□□□□ -1.38
RFX3-212ENST00000617270 MID2Q9UJV3 735 aa6.46□□□□□ -1.38
RFX3-212ENST00000617270 CDC23Q9UJX2 597 aa6.46□□□□□ -1.38
RFX3-212ENST00000617270 GYG2O15488 501 aa6.46□□□□□ -1.38
RFX3-212ENST00000617270 IMPG1Q17R60 797 aa6.46□□□□□ -1.38
RFX3-212ENST00000617270 CEP55Q53EZ4 464 aa6.46□□□□□ -1.38
RFX3-212ENST00000617270 FBXO11Q86XK2 927 aa6.46□□□□□ -1.38
RFX3-212ENST00000617270 CCNYL1Q8N7R7 359 aa6.46□□□□□ -1.38
RFX3-212ENST00000617270 HEXIM2Q96MH2 286 aaKnown RBP6.46□□□□□ -1.38
RFX3-212ENST00000617270 FAM167BQ9BTA0 163 aa6.46□□□□□ -1.38
RFX3-212ENST00000617270 LRRC4Q9HBW1 653 aa6.46□□□□□ -1.38
RFX3-212ENST00000617270 CDK13Q14004 1512 aaKnown RBP6.46□□□□□ -1.38
RFX3-212ENST00000617270 SUPT3HO75486 399 aa6.46□□□□□ -1.38
RFX3-212ENST00000617270 ZNF467Q7Z7K2 595 aaPredicted RBP6.46□□□□□ -1.38
RFX3-212ENST00000617270 PDIK1LQ8N165 341 aa6.46□□□□□ -1.38
RFX3-212ENST00000617270 TRIML1Q8N9V2 468 aa6.46□□□□□ -1.38
RFX3-212ENST00000617270 SUPT20HQ8NEM7 779 aa6.46□□□□□ -1.38
RFX3-212ENST00000617270 PYROXD1Q8WU10 500 aa6.46□□□□□ -1.38
RFX3-212ENST00000617270 PHF21AQ96BD5 680 aa6.46□□□□□ -1.38
RFX3-212ENST00000617270 USP28Q96RU2 1077 aa6.46□□□□□ -1.38
RFX3-212ENST00000617270 ZMYND12Q9H0C1 365 aa6.46□□□□□ -1.38
RFX3-212ENST00000617270 PCDHA1Q9Y5I3 950 aa6.46□□□□□ -1.38
RFX3-212ENST00000617270 DMRT2Q9Y5R5 561 aa6.46□□□□□ -1.38
RFX3-212ENST00000617270 MROH5Q6ZUA9 1318 aa6.46□□□□□ -1.38
RFX3-212ENST00000617270 SCG2P13521 617 aa6.46□□□□□ -1.38
RFX3-212ENST00000617270 HDAC4P56524 1084 aa6.46□□□□□ -1.38
RFX3-212ENST00000617270 MECOMQ03112 1051 aa6.46□□□□□ -1.38
RFX3-212ENST00000617270 MYO1EQ12965 1108 aa6.46□□□□□ -1.38
RFX3-212ENST00000617270 CCDC92Q53HC0 331 aaPredicted RBP6.46□□□□□ -1.38
RFX3-212ENST00000617270 PPP6R3Q5H9R7 873 aaPredicted RBP6.46□□□□□ -1.38
RFX3-212ENST00000617270 RNF219Q5W0B1 726 aaPredicted RBP6.46□□□□□ -1.38
RFX3-212ENST00000617270 RNF139Q8WU17 664 aa6.46□□□□□ -1.38
RFX3-212ENST00000617270 CASS4Q9NQ75 786 aa6.46□□□□□ -1.38
RFX3-212ENST00000617270 ZFP69BQ9UJL9 534 aa6.46□□□□□ -1.38
RFX3-212ENST00000617270 USP17L12C9JPN9 530 aa6.45□□□□□ -1.38
RFX3-212ENST00000617270 USP17L21D6R901 530 aa6.45□□□□□ -1.38
RFX3-212ENST00000617270 VAMP4O75379 141 aa6.45□□□□□ -1.38
RFX3-212ENST00000617270 IMPDH2P12268 514 aa6.45□□□□□ -1.38
RFX3-212ENST00000617270 PPARGP37231 505 aaPredicted RBP6.45□□□□□ -1.38
RFX3-212ENST00000617270 RBL2Q08999 1139 aa6.45□□□□□ -1.38
RFX3-212ENST00000617270 SPATA1Q5VX52 437 aa6.45□□□□□ -1.38
RFX3-212ENST00000617270 ZNF513Q8N8E2 541 aaPredicted RBP6.45□□□□□ -1.38
RFX3-212ENST00000617270 PNMA1Q8ND90 353 aa6.45□□□□□ -1.38
RFX3-212ENST00000617270 AFF4Q9UHB7 1163 aaKnown RBP6.45□□□□□ -1.38
RFX3-212ENST00000617270 PCDHA7Q9UN72 937 aa6.45□□□□□ -1.38
RFX3-212ENST00000617270 APOBEC2Q9Y235 224 aaKnown RBP6.45□□□□□ -1.38
RFX3-212ENST00000617270 ZNF233A6NK53 670 aa6.45□□□□□ -1.38
RFX3-212ENST00000617270 KLRF2D3W0D1 207 aa6.45□□□□□ -1.38
RFX3-212ENST00000617270 NEMP1O14524 444 aa6.45□□□□□ -1.38
RFX3-212ENST00000617270 CLIC2O15247 247 aa6.45□□□□□ -1.38
RFX3-212ENST00000617270 MAPK13O15264 365 aa6.45□□□□□ -1.38
RFX3-212ENST00000617270 SEC24DO94855 1032 aaPredicted RBP6.45□□□□□ -1.38
RFX3-212ENST00000617270 DRP2Q13474 957 aa6.45□□□□□ -1.38
RFX3-212ENST00000617270 DMC1Q14565 340 aa6.45□□□□□ -1.38
RFX3-212ENST00000617270 ANGPT1Q15389 498 aa6.45□□□□□ -1.38
RFX3-212ENST00000617270 CCHCR1Q8TD31 782 aa6.45□□□□□ -1.38
RFX3-212ENST00000617270 FSD1LQ9BXM9 530 aa6.45□□□□□ -1.38
RFX3-212ENST00000617270 UBE2TQ9NPD8 197 aaPredicted RBP6.45□□□□□ -1.38
RFX3-212ENST00000617270 KMT5AQ9NQR1 393 aa6.45□□□□□ -1.38
RFX3-212ENST00000617270 ADA2Q9NZK5 511 aa6.45□□□□□ -1.38
RFX3-212ENST00000617270 SATB2Q9UPW6 733 aa6.45□□□□□ -1.38
RFX3-212ENST00000617270 ZNF263O14978 683 aa6.45□□□□□ -1.38
RFX3-212ENST00000617270 TOM1O60784 492 aa6.45□□□□□ -1.38
RFX3-212ENST00000617270 MMEP08473 750 aa6.45□□□□□ -1.38
RFX3-212ENST00000617270 SLC7A5Q01650 507 aa6.45□□□□□ -1.38
RFX3-212ENST00000617270 SDR42E1Q8WUS8 393 aa6.45□□□□□ -1.38
RFX3-212ENST00000617270 SH3KBP1Q96B97 665 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms