RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 GCFC2P16383 781 aaKnown RBP15.33■□□□□ 0.04
CACNA1C-231ENST00000616390 CASP5P51878 434 aa15.33■□□□□ 0.04
CACNA1C-231ENST00000616390 ADAM9Q13443 819 aa15.33■□□□□ 0.04
CACNA1C-231ENST00000616390 CATSPER3Q86XQ3 398 aa15.33■□□□□ 0.04
CACNA1C-231ENST00000616390 EHBP1Q8NDI1 1231 aa15.33■□□□□ 0.04
CACNA1C-231ENST00000616390 BRWD3Q6RI45 1802 aa15.33■□□□□ 0.04
CACNA1C-231ENST00000616390 SCN9AQ15858 1988 aa15.33■□□□□ 0.04
CACNA1C-231ENST00000616390 A0A1W2PQJ5 194 aa15.33■□□□□ 0.04
CACNA1C-231ENST00000616390 SFI1A8K8P3 1242 aa15.33■□□□□ 0.04
CACNA1C-231ENST00000616390 NDUFB10O96000 172 aa15.33■□□□□ 0.04
CACNA1C-231ENST00000616390 CYP11B2P19099 503 aa15.33■□□□□ 0.04
CACNA1C-231ENST00000616390 EHHADHQ08426 723 aa15.33■□□□□ 0.04
CACNA1C-231ENST00000616390 CASP8Q14790 479 aa15.33■□□□□ 0.04
CACNA1C-231ENST00000616390 FBXO11Q86XK2 927 aa15.33■□□□□ 0.04
CACNA1C-231ENST00000616390 MTMR8Q96EF0 704 aa15.33■□□□□ 0.04
CACNA1C-231ENST00000616390 PLEKHA4Q9H4M7 779 aa15.33■□□□□ 0.04
CACNA1C-231ENST00000616390 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.33■□□□□ 0.04
CACNA1C-231ENST00000616390 L1RE1Q9UN81 338 aa15.33■□□□□ 0.04
CACNA1C-231ENST00000616390 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.33■□□□□ 0.04
CACNA1C-231ENST00000616390 TCP10L2B9ZVM9 353 aa15.32■□□□□ 0.04
CACNA1C-231ENST00000616390 FAM86B1E9PN63 330 aa15.32■□□□□ 0.04
CACNA1C-231ENST00000616390 CHMP2AO43633 222 aa15.32■□□□□ 0.04
CACNA1C-231ENST00000616390 FAM86B2P0C5J1 330 aa15.32■□□□□ 0.04
CACNA1C-231ENST00000616390 COBLL1Q53SF7 1204 aa15.32■□□□□ 0.04
CACNA1C-231ENST00000616390 ARSHQ5FYA8 562 aa15.32■□□□□ 0.04
CACNA1C-231ENST00000616390 PAPD7Q5XG87 772 aaKnown RBP15.32■□□□□ 0.04
CACNA1C-231ENST00000616390 NFRKBQ6P4R8 1299 aa15.32■□□□□ 0.04
CACNA1C-231ENST00000616390 SCFD1Q8WVM8 642 aa15.32■□□□□ 0.04
CACNA1C-231ENST00000616390 AMNQ9BXJ7 453 aa15.32■□□□□ 0.04
CACNA1C-231ENST00000616390 DHX36Q9H2U1 1008 aaKnown RBP15.32■□□□□ 0.04
CACNA1C-231ENST00000616390 SALL4Q9UJQ4 1053 aa15.32■□□□□ 0.04
CACNA1C-231ENST00000616390 CEP83Q9Y592 693 aa15.32■□□□□ 0.04
CACNA1C-231ENST00000616390 KDM3AQ9Y4C1 1321 aa15.32■□□□□ 0.04
CACNA1C-231ENST00000616390 LRRC37AA6NMS7 1700 aa15.32■□□□□ 0.04
CACNA1C-231ENST00000616390 CLRN2A0PK11 232 aa15.32■□□□□ 0.04
CACNA1C-231ENST00000616390 ECE1P42892 770 aa15.32■□□□□ 0.04
CACNA1C-231ENST00000616390 RAPGEF1Q13905 1077 aa15.32■□□□□ 0.04
CACNA1C-231ENST00000616390 FIGNQ5HY92 759 aa15.32■□□□□ 0.04
CACNA1C-231ENST00000616390 DACT2Q5SW24 774 aa15.32■□□□□ 0.04
CACNA1C-231ENST00000616390 COG1Q8WTW3 980 aa15.32■□□□□ 0.04
CACNA1C-231ENST00000616390 BAP1Q92560 729 aa15.32■□□□□ 0.04
CACNA1C-231ENST00000616390 PRMT6Q96LA8 375 aaPredicted RBP15.32■□□□□ 0.04
CACNA1C-231ENST00000616390 CSRNP1Q96S65 589 aa15.32■□□□□ 0.04
CACNA1C-231ENST00000616390 ZBTB12Q9Y330 459 aaPredicted RBP15.32■□□□□ 0.04
CACNA1C-231ENST00000616390 LRRIQ3A6PVS8 624 aaPredicted RBP15.31■□□□□ 0.04
CACNA1C-231ENST00000616390 RSPH10B2B2RC85 870 aa15.31■□□□□ 0.04
CACNA1C-231ENST00000616390 H0YIN7 160 aa15.31■□□□□ 0.04
CACNA1C-231ENST00000616390 MAP2K7O14733 419 aa15.31■□□□□ 0.04
CACNA1C-231ENST00000616390 TACC1O75410 805 aa15.31■□□□□ 0.04
CACNA1C-231ENST00000616390 PRPF6O94906 941 aaKnown RBP15.31■□□□□ 0.04
CACNA1C-231ENST00000616390 RSPH10BP0C881 870 aa15.31■□□□□ 0.04
CACNA1C-231ENST00000616390 RRP1BQ14684 758 aaKnown RBP15.31■□□□□ 0.04
CACNA1C-231ENST00000616390 DNAAF5Q86Y56 855 aa15.31■□□□□ 0.04
CACNA1C-231ENST00000616390 DCAF4Q8WV16 495 aa15.31■□□□□ 0.04
CACNA1C-231ENST00000616390 TBC1D5Q92609 795 aa15.31■□□□□ 0.04
CACNA1C-231ENST00000616390 RGL1Q9NZL6 768 aa15.31■□□□□ 0.04
CACNA1C-231ENST00000616390 NYAP2Q9P242 653 aa15.31■□□□□ 0.04
CACNA1C-231ENST00000616390 CFBP00751 764 aa15.31■□□□□ 0.04
CACNA1C-231ENST00000616390 USP11P51784 963 aa15.31■□□□□ 0.04
CACNA1C-231ENST00000616390 USP14P54578 494 aa15.31■□□□□ 0.04
CACNA1C-231ENST00000616390 CCDC174Q6PII3 467 aa15.31■□□□□ 0.04
CACNA1C-231ENST00000616390 EHD4Q9H223 541 aa15.31■□□□□ 0.04
CACNA1C-231ENST00000616390 SH2D4AQ9H788 454 aa15.31■□□□□ 0.04
CACNA1C-231ENST00000616390 KCNMB3Q9NPA1 279 aa15.31■□□□□ 0.04
CACNA1C-231ENST00000616390 MYO3BQ8WXR4 1341 aa15.3■□□□□ 0.04
CACNA1C-231ENST00000616390 ACTN1P12814 892 aa15.3■□□□□ 0.04
CACNA1C-231ENST00000616390 NR2F2P24468 414 aa15.3■□□□□ 0.04
CACNA1C-231ENST00000616390 PTPROQ16827 1216 aa15.3■□□□□ 0.04
CACNA1C-231ENST00000616390 FAM83BQ5T0W9 1011 aa15.3■□□□□ 0.04
CACNA1C-231ENST00000616390 RBM26Q5T8P6 1007 aaKnown RBP15.3■□□□□ 0.04
CACNA1C-231ENST00000616390 STRIP1Q5VSL9 837 aa15.3■□□□□ 0.04
CACNA1C-231ENST00000616390 SYDE2Q5VT97 1194 aa15.3■□□□□ 0.04
CACNA1C-231ENST00000616390 PDXDC1Q6P996 788 aa15.3■□□□□ 0.04
CACNA1C-231ENST00000616390 ZNF513Q8N8E2 541 aaPredicted RBP15.3■□□□□ 0.04
CACNA1C-231ENST00000616390 PIGOQ8TEQ8 1089 aa15.3■□□□□ 0.04
CACNA1C-231ENST00000616390 HNRNPLLQ8WVV9 542 aaKnown RBP15.3■□□□□ 0.04
CACNA1C-231ENST00000616390 UBXN6Q9BZV1 441 aa15.3■□□□□ 0.04
CACNA1C-231ENST00000616390 SCAF8Q9UPN6 1271 aaKnown RBP15.3■□□□□ 0.04
CACNA1C-231ENST00000616390 A0A1W2PRG0 241 aa15.3■□□□□ 0.04
CACNA1C-231ENST00000616390 BMP3P12645 472 aa15.3■□□□□ 0.04
CACNA1C-231ENST00000616390 LMAN1P49257 510 aa15.3■□□□□ 0.04
CACNA1C-231ENST00000616390 RNASE9P60153 205 aaKnown RBP15.3■□□□□ 0.04
CACNA1C-231ENST00000616390 SLC7A5Q01650 507 aa15.3■□□□□ 0.04
CACNA1C-231ENST00000616390 GPS2Q13227 327 aa15.3■□□□□ 0.04
CACNA1C-231ENST00000616390 EZH2Q15910 746 aaKnown RBP15.3■□□□□ 0.04
CACNA1C-231ENST00000616390 ZCWPW2Q504Y3 356 aa15.3■□□□□ 0.04
CACNA1C-231ENST00000616390 DCAF17Q5H9S7 520 aaPredicted RBP15.3■□□□□ 0.04
CACNA1C-231ENST00000616390 TCERG1LQ5VWI1 586 aa15.3■□□□□ 0.04
CACNA1C-231ENST00000616390 TMEM179Q6ZVK1 233 aa15.3■□□□□ 0.04
CACNA1C-231ENST00000616390 SFR1Q86XK3 245 aa15.3■□□□□ 0.04
CACNA1C-231ENST00000616390 FAM133AQ8N9E0 248 aa15.3■□□□□ 0.04
CACNA1C-231ENST00000616390 IKZF4Q9H2S9 585 aa15.3■□□□□ 0.04
CACNA1C-231ENST00000616390 DNM3Q9UQ16 869 aa15.3■□□□□ 0.04
CACNA1C-231ENST00000616390 CLIC2O15247 247 aa15.3■□□□□ 0.04
CACNA1C-231ENST00000616390 SFMBT2Q5VUG0 894 aa15.3■□□□□ 0.04
CACNA1C-231ENST00000616390 SLFN12Q8IYM2 578 aa15.3■□□□□ 0.04
CACNA1C-231ENST00000616390 TRIM58Q8NG06 486 aa15.3■□□□□ 0.04
CACNA1C-231ENST00000616390 MKL1Q969V6 931 aa15.3■□□□□ 0.04
CACNA1C-231ENST00000616390 TSGA10Q9BZW7 698 aa15.3■□□□□ 0.04
CACNA1C-231ENST00000616390 BHMT2Q9H2M3 363 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms