RNA–Protein interactions for RNA: ENST00000615901.4

SPTBN1-207, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 5 BASIC

Gene SPTBN1, Length 10,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-207ENST00000615901 COA7Q96BR5 231 aa9.9□□□□□ -0.82
SPTBN1-207ENST00000615901 KLHL14Q9P2G3 628 aa9.9□□□□□ -0.82
SPTBN1-207ENST00000615901 RIPOR2Q9Y4F9 1068 aa9.9□□□□□ -0.82
SPTBN1-207ENST00000615901 ZNF233A6NK53 670 aa9.9□□□□□ -0.82
SPTBN1-207ENST00000615901 COPB2P35606 906 aa9.9□□□□□ -0.82
SPTBN1-207ENST00000615901 VSIG1Q86XK7 387 aa9.9□□□□□ -0.82
SPTBN1-207ENST00000615901 LGALS16A8MUM7 142 aa9.9□□□□□ -0.82
SPTBN1-207ENST00000615901 ZNF131P52739 623 aa9.9□□□□□ -0.82
SPTBN1-207ENST00000615901 PDS5AQ29RF7 1337 aaKnown RBP9.9□□□□□ -0.82
SPTBN1-207ENST00000615901 MYO5BQ9ULV0 1848 aa9.9□□□□□ -0.82
SPTBN1-207ENST00000615901 ATG9AQ7Z3C6 839 aa9.9□□□□□ -0.82
SPTBN1-207ENST00000615901 WHAMMQ8TF30 809 aa9.9□□□□□ -0.82
SPTBN1-207ENST00000615901 EPSTI1Q96J88 318 aa9.9□□□□□ -0.82
SPTBN1-207ENST00000615901 VCX3BQ9H321 246 aa9.9□□□□□ -0.82
SPTBN1-207ENST00000615901 SERPINA10Q9UK55 444 aa9.9□□□□□ -0.82
SPTBN1-207ENST00000615901 AKT3Q9Y243 479 aa9.9□□□□□ -0.82
SPTBN1-207ENST00000615901 DIS3Q9Y2L1 958 aaKnown RBP9.9□□□□□ -0.82
SPTBN1-207ENST00000615901 CEMIPQ8WUJ3 1361 aa9.9□□□□□ -0.83
SPTBN1-207ENST00000615901 RAD17O75943 681 aa9.9□□□□□ -0.83
SPTBN1-207ENST00000615901 CUL1Q13616 776 aa9.9□□□□□ -0.83
SPTBN1-207ENST00000615901 GSDMBQ8TAX9 411 aa9.9□□□□□ -0.83
SPTBN1-207ENST00000615901 RAD54LQ92698 747 aa9.9□□□□□ -0.83
SPTBN1-207ENST00000615901 CAPS2Q9BXY5 557 aa9.9□□□□□ -0.83
SPTBN1-207ENST00000615901 DAAM1Q9Y4D1 1078 aa9.9□□□□□ -0.83
SPTBN1-207ENST00000615901 MRRFQ96E11 262 aaKnown RBP9.9□□□□□ -0.83
SPTBN1-207ENST00000615901 RPS6KC1Q96S38 1066 aa9.9□□□□□ -0.83
SPTBN1-207ENST00000615901 AP5M1Q9H0R1 490 aa9.9□□□□□ -0.83
SPTBN1-207ENST00000615901 CNOT10Q9H9A5 744 aaKnown RBP9.9□□□□□ -0.83
SPTBN1-207ENST00000615901 BARHL2Q9NY43 387 aa9.9□□□□□ -0.83
SPTBN1-207ENST00000615901 ECEL1O95672 775 aa9.89□□□□□ -0.83
SPTBN1-207ENST00000615901 TCP11Q8WWU5 503 aa9.89□□□□□ -0.83
SPTBN1-207ENST00000615901 CEP72Q9P209 647 aa9.89□□□□□ -0.83
SPTBN1-207ENST00000615901 PRELPP51888 382 aa9.89□□□□□ -0.83
SPTBN1-207ENST00000615901 TPD52P55327 224 aaPredicted RBP9.89□□□□□ -0.83
SPTBN1-207ENST00000615901 LMNTD2Q8IXW0 634 aa9.89□□□□□ -0.83
SPTBN1-207ENST00000615901 TBC1D22BQ9NU19 505 aa9.89□□□□□ -0.83
SPTBN1-207ENST00000615901 ADGRB2O60241 1585 aa9.89□□□□□ -0.83
SPTBN1-207ENST00000615901 DDIT3P35638 169 aa9.89□□□□□ -0.83
SPTBN1-207ENST00000615901 MAPK4P31152 587 aa9.89□□□□□ -0.83
SPTBN1-207ENST00000615901 EIF4A3P38919 411 aaKnown RBP9.89□□□□□ -0.83
SPTBN1-207ENST00000615901 MCPH1Q8NEM0 835 aa9.89□□□□□ -0.83
SPTBN1-207ENST00000615901 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.89□□□□□ -0.831e-29■□□□□ 9.8
SPTBN1-207ENST00000615901 SNX25Q9H3E2 840 aa9.89□□□□□ -0.83
SPTBN1-207ENST00000615901 GUCY2DQ02846 1103 aa9.89□□□□□ -0.83
SPTBN1-207ENST00000615901 RC3H1Q5TC82 1133 aaKnown RBP9.89□□□□□ -0.83
SPTBN1-207ENST00000615901 PHLDB2Q86SQ0 1253 aa9.89□□□□□ -0.83
SPTBN1-207ENST00000615901 SP8Q8IXZ3 490 aa9.89□□□□□ -0.83
SPTBN1-207ENST00000615901 SLC35F6Q8N357 371 aa9.89□□□□□ -0.83
SPTBN1-207ENST00000615901 CDKL2Q92772 493 aa9.89□□□□□ -0.83
SPTBN1-207ENST00000615901 MYOM1P52179 1685 aa9.89□□□□□ -0.83
SPTBN1-207ENST00000615901 AFF2P51816 1311 aa9.89□□□□□ -0.83
SPTBN1-207ENST00000615901 PVALEFA0A1B0GWK0 134 aa9.89□□□□□ -0.83
SPTBN1-207ENST00000615901 NDUFA10O95299 355 aa9.89□□□□□ -0.83
SPTBN1-207ENST00000615901 SFNP31947 248 aa9.89□□□□□ -0.83
SPTBN1-207ENST00000615901 CHAMP1Q96JM3 812 aa9.89□□□□□ -0.83
SPTBN1-207ENST00000615901 SCINQ9Y6U3 715 aa9.89□□□□□ -0.83
SPTBN1-207ENST00000615901 SORBS3O60504 671 aa9.89□□□□□ -0.83
SPTBN1-207ENST00000615901 GARSP41250 739 aaKnown RBP9.89□□□□□ -0.83
SPTBN1-207ENST00000615901 CYB5R4Q7L1T6 521 aa9.89□□□□□ -0.83
SPTBN1-207ENST00000615901 FAM133AQ8N9E0 248 aa9.89□□□□□ -0.83
SPTBN1-207ENST00000615901 FAM193BQ96PV7 902 aaPredicted RBP9.89□□□□□ -0.83
SPTBN1-207ENST00000615901 BUB1BO60566 1050 aaPredicted RBP9.89□□□□□ -0.83
SPTBN1-207ENST00000615901 ECM2O94769 699 aaPredicted RBP9.89□□□□□ -0.83
SPTBN1-207ENST00000615901 RCSD1Q6JBY9 416 aa9.89□□□□□ -0.83
SPTBN1-207ENST00000615901 DNAJC24Q6P3W2 148 aa9.89□□□□□ -0.83
SPTBN1-207ENST00000615901 FAM20AQ96MK3 541 aa9.89□□□□□ -0.83
SPTBN1-207ENST00000615901 CUL4BQ13620 913 aa9.88□□□□□ -0.83
SPTBN1-207ENST00000615901 ANKRD20A3Q5VUR7 823 aa9.88□□□□□ -0.83
SPTBN1-207ENST00000615901 APOBEC3FQ8IUX4 373 aaKnown RBP9.88□□□□□ -0.83
SPTBN1-207ENST00000615901 CTAGE3PQ8IX95 158 aa9.88□□□□□ -0.83
SPTBN1-207ENST00000615901 RHOT2Q8IXI1 618 aa9.88□□□□□ -0.83
SPTBN1-207ENST00000615901 PIM2Q9P1W9 311 aa9.88□□□□□ -0.83
SPTBN1-207ENST00000615901 GH2P01242 217 aa9.88□□□□□ -0.83
SPTBN1-207ENST00000615901 PRPSAP1Q14558 356 aa9.88□□□□□ -0.83
SPTBN1-207ENST00000615901 SLMAPQ14BN4 828 aa9.88□□□□□ -0.83
SPTBN1-207ENST00000615901 FAM47CQ5HY64 1035 aa9.88□□□□□ -0.83
SPTBN1-207ENST00000615901 PGBD1Q96JS3 809 aa9.88□□□□□ -0.83
SPTBN1-207ENST00000615901 PCDHA13Q9Y5I0 950 aa9.88□□□□□ -0.83
SPTBN1-207ENST00000615901 RICTORQ6R327 1708 aa9.88□□□□□ -0.83
SPTBN1-207ENST00000615901 MYH9P35579 1960 aaKnown RBP9.88□□□□□ -0.83
SPTBN1-207ENST00000615901 NRBP1Q9UHY1 535 aa9.88□□□□□ -0.83
SPTBN1-207ENST00000615901 MROH1Q8NDA8 1641 aa9.88□□□□□ -0.83
SPTBN1-207ENST00000615901 SPATA31A6Q5VVP1 1343 aa9.88□□□□□ -0.83
SPTBN1-207ENST00000615901 SOWAHDA6NJG2 315 aa9.88□□□□□ -0.83
SPTBN1-207ENST00000615901 GNGT1P63211 74 aa9.88□□□□□ -0.83
SPTBN1-207ENST00000615901 UBXN2AP68543 259 aa9.88□□□□□ -0.83
SPTBN1-207ENST00000615901 VPS72Q15906 364 aa9.88□□□□□ -0.83
SPTBN1-207ENST00000615901 UBE2SQ16763 222 aa9.88□□□□□ -0.83
SPTBN1-207ENST00000615901 RNF207Q6ZRF8 634 aa9.88□□□□□ -0.83
SPTBN1-207ENST00000615901 KIAA1586Q9HCI6 787 aa9.88□□□□□ -0.83
SPTBN1-207ENST00000615901 HERC5Q9UII4 1024 aaKnown RBP9.88□□□□□ -0.83
SPTBN1-207ENST00000615901 NBPF26B4DH59 902 aa9.88□□□□□ -0.83
SPTBN1-207ENST00000615901 MCF2LO15068 1137 aa9.88□□□□□ -0.83
SPTBN1-207ENST00000615901 SH3BP5O60239 455 aa9.88□□□□□ -0.83
SPTBN1-207ENST00000615901 KRT76Q01546 638 aa9.88□□□□□ -0.83
SPTBN1-207ENST00000615901 NBPF10Q6P3W6 841 aaKnown RBP9.88□□□□□ -0.83
SPTBN1-207ENST00000615901 NBPF15Q8N660 670 aa9.88□□□□□ -0.83
SPTBN1-207ENST00000615901 COL3A1P02461 1466 aaPredicted RBP9.88□□□□□ -0.83
SPTBN1-207ENST00000615901 WDR64B1ANS9 1081 aa9.88□□□□□ -0.83
SPTBN1-207ENST00000615901 FDX1P10109 184 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms