RNA–Protein interactions for RNA: ENST00000615665.4

SSBP2-220, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene SSBP2, Length 4,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-220ENST00000615665 MTRF1LQ9UGC7 380 aaKnown RBP15.36■□□□□ 0.05
SSBP2-220ENST00000615665 POLD1P28340 1107 aa15.36■□□□□ 0.05
SSBP2-220ENST00000615665 RNF14Q9UBS8 474 aa15.36■□□□□ 0.05
SSBP2-220ENST00000615665 TRIM10Q9UDY6 481 aa15.36■□□□□ 0.05
SSBP2-220ENST00000615665 KRIT1O00522 736 aa15.35■□□□□ 0.05
SSBP2-220ENST00000615665 SLC37A4O43826 429 aa15.35■□□□□ 0.05
SSBP2-220ENST00000615665 GUCY2DQ02846 1103 aa15.35■□□□□ 0.05
SSBP2-220ENST00000615665 PTF1AQ7RTS3 328 aa15.35■□□□□ 0.05
SSBP2-220ENST00000615665 PIGOQ8TEQ8 1089 aa15.35■□□□□ 0.05
SSBP2-220ENST00000615665 SCLT1Q96NL6 688 aa15.35■□□□□ 0.05
SSBP2-220ENST00000615665 INTS13Q9NVM9 706 aa15.35■□□□□ 0.05
SSBP2-220ENST00000615665 LAMB4A4D0S4 1761 aa15.35■□□□□ 0.05
SSBP2-220ENST00000615665 CYTH3O43739 400 aa15.35■□□□□ 0.05
SSBP2-220ENST00000615665 N4BP1O75113 896 aaKnown RBP15.35■□□□□ 0.05
SSBP2-220ENST00000615665 MYL7Q01449 175 aa15.35■□□□□ 0.05
SSBP2-220ENST00000615665 GFPT1Q06210 699 aaPredicted RBP15.35■□□□□ 0.05
SSBP2-220ENST00000615665 KCNH2Q12809 1159 aa15.35■□□□□ 0.05
SSBP2-220ENST00000615665 TTI2Q6NXR4 508 aa15.35■□□□□ 0.05
SSBP2-220ENST00000615665 NYAP2Q9P242 653 aa15.35■□□□□ 0.05
SSBP2-220ENST00000615665 SFI1A8K8P3 1242 aa15.35■□□□□ 0.05
SSBP2-220ENST00000615665 XKR9Q5GH70 373 aa15.35■□□□□ 0.05
SSBP2-220ENST00000615665 WDR44Q5JSH3 913 aa15.35■□□□□ 0.05
SSBP2-220ENST00000615665 FAM102BQ5T8I3 360 aa15.35■□□□□ 0.05
SSBP2-220ENST00000615665 TRIM65Q6PJ69 517 aa15.35■□□□□ 0.05
SSBP2-220ENST00000615665 MIGA2Q7L4E1 593 aa15.35■□□□□ 0.05
SSBP2-220ENST00000615665 FAM160B2Q86V87 743 aa15.35■□□□□ 0.05
SSBP2-220ENST00000615665 KRT12Q99456 494 aa15.35■□□□□ 0.05
SSBP2-220ENST00000615665 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.35■□□□□ 0.054e-6■■■■■ 98.6
SSBP2-220ENST00000615665 NEFHP12036 1026 aa15.35■□□□□ 0.05
SSBP2-220ENST00000615665 STRIP1Q5VSL9 837 aa15.35■□□□□ 0.05
SSBP2-220ENST00000615665 MPHOSPH6Q99547 160 aaKnown RBP15.35■□□□□ 0.05
SSBP2-220ENST00000615665 EDEM3Q9BZQ6 932 aa15.35■□□□□ 0.05
SSBP2-220ENST00000615665 C21orf2O43822 256 aa15.34■□□□□ 0.05
SSBP2-220ENST00000615665 HPDP32754 393 aaPredicted RBP15.34■□□□□ 0.05
SSBP2-220ENST00000615665 GJC1P36383 396 aa15.34■□□□□ 0.05
SSBP2-220ENST00000615665 GRB10Q13322 594 aa15.34■□□□□ 0.05
SSBP2-220ENST00000615665 GRIK5Q16478 980 aa15.34■□□□□ 0.05
SSBP2-220ENST00000615665 CCDC93Q567U6 631 aa15.34■□□□□ 0.05
SSBP2-220ENST00000615665 ARHGEF16Q5VV41 709 aa15.34■□□□□ 0.05
SSBP2-220ENST00000615665 FAM204AQ9H8W3 233 aa15.34■□□□□ 0.05
SSBP2-220ENST00000615665 NID2Q14112 1375 aa15.34■□□□□ 0.05
SSBP2-220ENST00000615665 TLDC2A0PJX2 215 aa15.34■□□□□ 0.05
SSBP2-220ENST00000615665 CTNNA2P26232 953 aa15.34■□□□□ 0.05
SSBP2-220ENST00000615665 KLK7P49862 253 aa15.34■□□□□ 0.05
SSBP2-220ENST00000615665 KNOP1Q1ED39 458 aaKnown RBP15.34■□□□□ 0.05
SSBP2-220ENST00000615665 C10orf76Q5T2E6 689 aa15.34■□□□□ 0.05
SSBP2-220ENST00000615665 LMNB1P20700 586 aa15.34■□□□□ 0.05
SSBP2-220ENST00000615665 EPHB4P54760 987 aa15.34■□□□□ 0.05
SSBP2-220ENST00000615665 PDXDC1Q6P996 788 aa15.34■□□□□ 0.05
SSBP2-220ENST00000615665 RIOX1Q9H6W3 641 aa15.34■□□□□ 0.05
SSBP2-220ENST00000615665 GFPT2O94808 682 aa15.33■□□□□ 0.05
SSBP2-220ENST00000615665 NR3C1P04150 777 aa15.33■□□□□ 0.05
SSBP2-220ENST00000615665 PPP1R7Q15435 360 aa15.33■□□□□ 0.05
SSBP2-220ENST00000615665 CCDC50Q8IVM0 306 aa15.33■□□□□ 0.05
SSBP2-220ENST00000615665 POLD4Q9HCU8 107 aa15.33■□□□□ 0.05
SSBP2-220ENST00000615665 TMOD4Q9NZQ9 345 aa15.33■□□□□ 0.05
SSBP2-220ENST00000615665 DISP2A7MBM2 1401 aa15.33■□□□□ 0.05
SSBP2-220ENST00000615665 COL14A1Q05707 1796 aaKnown RBP15.33■□□□□ 0.05
SSBP2-220ENST00000615665 WNT7AO00755 349 aa15.33■□□□□ 0.04
SSBP2-220ENST00000615665 RNF40O75150 1001 aa15.33■□□□□ 0.04
SSBP2-220ENST00000615665 HEXIM1O94992 359 aaKnown RBP15.33■□□□□ 0.04
SSBP2-220ENST00000615665 DESP17661 470 aa15.33■□□□□ 0.04
SSBP2-220ENST00000615665 CALCOCO2Q13137 446 aa15.33■□□□□ 0.04
SSBP2-220ENST00000615665 MICALL1Q8N3F8 863 aa15.33■□□□□ 0.04
SSBP2-220ENST00000615665 EXOC4Q96A65 974 aa15.33■□□□□ 0.04
SSBP2-220ENST00000615665 NPHP3-ACAD11A0A0J9YXS1 232 aa15.33■□□□□ 0.04
SSBP2-220ENST00000615665 A6NNZ2 444 aa15.33■□□□□ 0.04
SSBP2-220ENST00000615665 NDUFB10O96000 172 aa15.33■□□□□ 0.04
SSBP2-220ENST00000615665 H2AFXP16104 143 aaPredicted RBP15.33■□□□□ 0.04
SSBP2-220ENST00000615665 TUBB8Q3ZCM7 444 aa15.33■□□□□ 0.04
SSBP2-220ENST00000615665 OTUD6AQ7L8S5 288 aa15.33■□□□□ 0.04
SSBP2-220ENST00000615665 ERGIC2Q96RQ1 377 aa15.33■□□□□ 0.04
SSBP2-220ENST00000615665 MKRN1Q9UHC7 482 aaKnown RBP15.33■□□□□ 0.04
SSBP2-220ENST00000615665 SMIM23A6NLE4 172 aa15.33■□□□□ 0.04
SSBP2-220ENST00000615665 GOLGA8KD6RF30 607 aa15.33■□□□□ 0.04
SSBP2-220ENST00000615665 STRN3Q13033 797 aa15.33■□□□□ 0.04
SSBP2-220ENST00000615665 ALKBH5Q6P6C2 394 aaKnown RBP15.33■□□□□ 0.04
SSBP2-220ENST00000615665 CCDC25Q86WR0 208 aa15.33■□□□□ 0.04
SSBP2-220ENST00000615665 USP14P54578 494 aa15.32■□□□□ 0.04
SSBP2-220ENST00000615665 CLUL1Q15846 466 aa15.32■□□□□ 0.04
SSBP2-220ENST00000615665 EPB41L5Q9HCM4 733 aa15.32■□□□□ 0.04
SSBP2-220ENST00000615665 NDUFAB1O14561 156 aa15.32■□□□□ 0.04
SSBP2-220ENST00000615665 HARSP12081 509 aaKnown RBP15.32■□□□□ 0.04
SSBP2-220ENST00000615665 VSNL1P62760 191 aa15.32■□□□□ 0.04
SSBP2-220ENST00000615665 ZNF772Q68DY9 489 aaPredicted RBP15.32■□□□□ 0.04
SSBP2-220ENST00000615665 FAM212AQ96EL1 285 aa15.32■□□□□ 0.04
SSBP2-220ENST00000615665 DNAJC7Q99615 494 aa15.32■□□□□ 0.04
SSBP2-220ENST00000615665 TYW1Q9NV66 732 aaKnown RBP15.32■□□□□ 0.04
SSBP2-220ENST00000615665 GOLGA6L7A0A1B0GV03 622 aa15.32■□□□□ 0.04
SSBP2-220ENST00000615665 GBP2P32456 591 aaPredicted RBP15.32■□□□□ 0.04
SSBP2-220ENST00000615665 PMS1P54277 932 aaKnown RBP15.32■□□□□ 0.04
SSBP2-220ENST00000615665 SLC7A5Q01650 507 aa15.32■□□□□ 0.04
SSBP2-220ENST00000615665 RUFY4Q6ZNE9 571 aa15.32■□□□□ 0.04
SSBP2-220ENST00000615665 TNFRSF25Q93038 417 aa15.32■□□□□ 0.04
SSBP2-220ENST00000615665 ZCCHC17Q9NP64 241 aaKnown RBP15.32■□□□□ 0.04
SSBP2-220ENST00000615665 ST7Q9NRC1 585 aa15.32■□□□□ 0.04
SSBP2-220ENST00000615665 PKD1L3Q7Z443 1732 aa15.32■□□□□ 0.04
SSBP2-220ENST00000615665 N4BP2Q86UW6 1770 aaPredicted RBP15.31■□□□□ 0.04
SSBP2-220ENST00000615665 A0A1W2PQJ5 194 aa15.31■□□□□ 0.04
SSBP2-220ENST00000615665 PALMO75781 387 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms