RNA–Protein interactions for RNA: ENST00000615517.4

MUC1-227, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 951 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-227ENST00000615517 COL26A1Q96A83 441 aa8.11□□□□□ -1.11
MUC1-227ENST00000615517 TAAR1Q96RJ0 339 aa8.11□□□□□ -1.11
MUC1-227ENST00000615517 MPHOSPH6Q99547 160 aaKnown RBP8.11□□□□□ -1.11
MUC1-227ENST00000615517 HAUS7Q99871 368 aa8.11□□□□□ -1.11
MUC1-227ENST00000615517 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.11□□□□□ -1.11
MUC1-227ENST00000615517 SEMA4AQ9H3S1 761 aa8.11□□□□□ -1.11
MUC1-227ENST00000615517 MFSD1Q9H3U5 465 aa8.11□□□□□ -1.11
MUC1-227ENST00000615517 RNPEPQ9H4A4 650 aa8.11□□□□□ -1.11
MUC1-227ENST00000615517 POMKQ9H5K3 350 aa8.11□□□□□ -1.11
MUC1-227ENST00000615517 TSHZ2Q9NRE2 1034 aa8.11□□□□□ -1.11
MUC1-227ENST00000615517 COL20A1Q9P218 1284 aa8.11□□□□□ -1.11
MUC1-227ENST00000615517 FRYQ5TBA9 3013 aa8.11□□□□□ -1.11
MUC1-227ENST00000615517 MIA3Q5JRA6 1907 aa8.11□□□□□ -1.11
MUC1-227ENST00000615517 RALGAPA1Q6GYQ0 2036 aa8.1□□□□□ -1.11
MUC1-227ENST00000615517 CEP295Q9C0D2 2601 aa8.1□□□□□ -1.11
MUC1-227ENST00000615517 PPFIA3O75145 1194 aa8.1□□□□□ -1.11
MUC1-227ENST00000615517 CAND2O75155 1236 aa8.1□□□□□ -1.11
MUC1-227ENST00000615517 CHRNA1P02708 482 aa8.1□□□□□ -1.11
MUC1-227ENST00000615517 SMIM10L2AP0DMW4 78 aa8.1□□□□□ -1.11
MUC1-227ENST00000615517 SMIM10L2BP0DMW5 78 aa8.1□□□□□ -1.11
MUC1-227ENST00000615517 LAMC2Q13753 1193 aa8.1□□□□□ -1.11
MUC1-227ENST00000615517 HSDL1Q3SXM5 330 aa8.1□□□□□ -1.11
MUC1-227ENST00000615517 CEP85Q6P2H3 762 aa8.1□□□□□ -1.11
MUC1-227ENST00000615517 RTN4RL1Q86UN2 441 aaPredicted RBP8.1□□□□□ -1.11
MUC1-227ENST00000615517 ERC1Q8IUD2 1116 aa8.1□□□□□ -1.11
MUC1-227ENST00000615517 CMTR2Q8IYT2 770 aaKnown RBP8.1□□□□□ -1.11
MUC1-227ENST00000615517 RUBCNQ92622 972 aa8.1□□□□□ -1.11
MUC1-227ENST00000615517 FRAT1Q92837 279 aaPredicted RBP8.1□□□□□ -1.11
MUC1-227ENST00000615517 HINFPQ9BQA5 517 aa8.1□□□□□ -1.11
MUC1-227ENST00000615517 EHMT1Q9H9B1 1298 aa8.1□□□□□ -1.11
MUC1-227ENST00000615517 STX8Q9UNK0 236 aa8.1□□□□□ -1.11
MUC1-227ENST00000615517 NR2E1Q9Y466 385 aa8.1□□□□□ -1.11
MUC1-227ENST00000615517 SUPT16HQ9Y5B9 1047 aaKnown RBP8.1□□□□□ -1.11
MUC1-227ENST00000615517 DOCK8Q8NF50 2099 aa8.1□□□□□ -1.11
MUC1-227ENST00000615517 ZZEF1O43149 2961 aa8.1□□□□□ -1.11
MUC1-227ENST00000615517 FRMPD2Q68DX3 1309 aaPredicted RBP8.09□□□□□ -1.11
MUC1-227ENST00000615517 PATJQ8NI35 1801 aa8.09□□□□□ -1.11
MUC1-227ENST00000615517 B4DLN1 442 aa8.09□□□□□ -1.11
MUC1-227ENST00000615517 FSCN2O14926 492 aa8.09□□□□□ -1.11
MUC1-227ENST00000615517 IPO8O15397 1037 aaKnown RBP8.09□□□□□ -1.11
MUC1-227ENST00000615517 PPFIA4O75335 1185 aa8.09□□□□□ -1.11
MUC1-227ENST00000615517 GHRP10912 638 aa8.09□□□□□ -1.11
MUC1-227ENST00000615517 ATP5JP18859 108 aa8.09□□□□□ -1.11
MUC1-227ENST00000615517 NOVP48745 357 aa8.09□□□□□ -1.11
MUC1-227ENST00000615517 GATMP50440 423 aa8.09□□□□□ -1.11
MUC1-227ENST00000615517 MRPL12P52815 198 aaKnown RBP8.09□□□□□ -1.11
MUC1-227ENST00000615517 LPIN1Q14693 890 aa8.09□□□□□ -1.11
MUC1-227ENST00000615517 CCDC96Q2M329 555 aa8.09□□□□□ -1.11
MUC1-227ENST00000615517 PAN2Q504Q3 1202 aaKnown RBP8.09□□□□□ -1.11
MUC1-227ENST00000615517 MYSM1Q5VVJ2 828 aa8.09□□□□□ -1.11
MUC1-227ENST00000615517 LLGL2Q6P1M3 1020 aa8.09□□□□□ -1.11
MUC1-227ENST00000615517 SUMF1Q8NBK3 374 aa8.09□□□□□ -1.11
MUC1-227ENST00000615517 SYTL5Q8TDW5 730 aaPredicted RBP8.09□□□□□ -1.11
MUC1-227ENST00000615517 MICAL1Q8TDZ2 1067 aa8.09□□□□□ -1.11
MUC1-227ENST00000615517 DCAF4Q8WV16 495 aa8.09□□□□□ -1.11
MUC1-227ENST00000615517 RIN2Q8WYP3 895 aaPredicted RBP8.09□□□□□ -1.11
MUC1-227ENST00000615517 OSBP2Q969R2 916 aa8.09□□□□□ -1.11
MUC1-227ENST00000615517 CDCA3Q99618 268 aaPredicted RBP8.09□□□□□ -1.11
MUC1-227ENST00000615517 ZNF287Q9HBT7 754 aa8.09□□□□□ -1.11
MUC1-227ENST00000615517 GPCPD1Q9NPB8 672 aa8.09□□□□□ -1.11
MUC1-227ENST00000615517 LIMD1Q9UGP4 676 aa8.09□□□□□ -1.11
MUC1-227ENST00000615517 ADRB1P08588 477 aa8.08□□□□□ -1.12
MUC1-227ENST00000615517 IFIT2P09913 472 aaKnown RBP8.08□□□□□ -1.12
MUC1-227ENST00000615517 TDO2P48775 406 aa8.08□□□□□ -1.12
MUC1-227ENST00000615517 ADAM17P78536 824 aa8.08□□□□□ -1.12
MUC1-227ENST00000615517 SP2Q02086 613 aa8.08□□□□□ -1.12
MUC1-227ENST00000615517 MGAT3Q09327 533 aa8.08□□□□□ -1.12
MUC1-227ENST00000615517 ACAP1Q15027 740 aa8.08□□□□□ -1.12
MUC1-227ENST00000615517 STXBP2Q15833 593 aa8.08□□□□□ -1.12
MUC1-227ENST00000615517 CELF3Q5SZQ8 465 aaKnown RBP8.08□□□□□ -1.12
MUC1-227ENST00000615517 KIAA0319Q5VV43 1072 aa8.08□□□□□ -1.12
MUC1-227ENST00000615517 IFNL3Q8IZI9 196 aa8.08□□□□□ -1.12
MUC1-227ENST00000615517 CLASRPQ8N2M8 674 aaKnown RBP8.08□□□□□ -1.12
MUC1-227ENST00000615517 RGS22Q8NE09 1264 aa8.08□□□□□ -1.12
MUC1-227ENST00000615517 FEZF2Q8TBJ5 459 aa8.08□□□□□ -1.12
MUC1-227ENST00000615517 RTP3Q9BQQ7 232 aa8.08□□□□□ -1.12
MUC1-227ENST00000615517 BCL11AQ9H165 835 aa8.08□□□□□ -1.12
MUC1-227ENST00000615517 BCAS3Q9H6U6 928 aa8.08□□□□□ -1.12
MUC1-227ENST00000615517 ERVK-5Q9HDB9 667 aa8.08□□□□□ -1.12
MUC1-227ENST00000615517 SETD4Q9NVD3 440 aa8.08□□□□□ -1.12
MUC1-227ENST00000615517 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.08□□□□□ -1.12
MUC1-227ENST00000615517 MRVI1Q9Y6F6 885 aa8.08□□□□□ -1.12
MUC1-227ENST00000615517 WDR19Q8NEZ3 1342 aa8.07□□□□□ -1.12
MUC1-227ENST00000615517 EVPLQ92817 2033 aa8.07□□□□□ -1.12
MUC1-227ENST00000615517 DCDC2BA2VCK2 349 aa8.07□□□□□ -1.12
MUC1-227ENST00000615517 HIDE1A8MVS5 230 aa8.07□□□□□ -1.12
MUC1-227ENST00000615517 H3BRB1 525 aa8.07□□□□□ -1.12
MUC1-227ENST00000615517 M0R2C6 588 aa8.07□□□□□ -1.12
MUC1-227ENST00000615517 GPAA1O43292 621 aa8.07□□□□□ -1.12
MUC1-227ENST00000615517 LGALS2P05162 132 aa8.07□□□□□ -1.12
MUC1-227ENST00000615517 WEE2P0C1S8 567 aa8.07□□□□□ -1.12
MUC1-227ENST00000615517 EIF2AK2P19525 551 aaKnown RBP8.07□□□□□ -1.12
MUC1-227ENST00000615517 UBE3AQ05086 875 aa8.07□□□□□ -1.12
MUC1-227ENST00000615517 APOBRQ0VD83 1088 aa8.07□□□□□ -1.12
MUC1-227ENST00000615517 USH1GQ495M9 461 aa8.07□□□□□ -1.12
MUC1-227ENST00000615517 ZSCAN25Q6NSZ9 544 aa8.07□□□□□ -1.12
MUC1-227ENST00000615517 RUFY4Q6ZNE9 571 aa8.07□□□□□ -1.12
MUC1-227ENST00000615517 ZDHHC14Q8IZN3 488 aa8.07□□□□□ -1.12
MUC1-227ENST00000615517 RASGRP4Q8TDF6 673 aa8.07□□□□□ -1.12
MUC1-227ENST00000615517 NSUN6Q8TEA1 469 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms