RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 ZNF572Q7Z3I7 529 aaPredicted RBP11.98□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 ZFPM1Q8IX07 1006 aa11.98□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 MMS19Q96T76 1030 aa11.98□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 NUCKS1Q9H1E3 243 aaKnown RBP11.98□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 GOLGA6AQ9NYA3 693 aa11.98□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 PCDHA12Q9UN75 941 aa11.98□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 ANO9A1A5B4 782 aa11.98□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 ACTN3Q08043 901 aaPredicted RBP11.98□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 EZH2Q15910 746 aaKnown RBP11.98□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 NFIL3Q16649 462 aa11.98□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 PROCA1Q8NCQ7 364 aaPredicted RBP11.98□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 SNX29Q8TEQ0 813 aa11.98□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 DDX12PQ92771 950 aa11.98□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 AMNQ9BXJ7 453 aa11.98□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 TSGA10Q9BZW7 698 aa11.98□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 MYO6Q9UM54 1294 aa11.98□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 SRCAPQ6ZRS2 3230 aa11.98□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 CDC37Q16543 378 aaPredicted RBP11.98□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 EDRF1Q3B7T1 1238 aa11.98□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 TMEM174Q8WUU8 243 aa11.98□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 PSMD1Q99460 953 aa11.98□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 RBAK-RBAKDNI3L0D1 243 aa11.97□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 MYBL2P10244 700 aa11.97□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 PRLRP16471 622 aa11.97□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 HPDP32754 393 aaPredicted RBP11.97□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 CYLC1P35663 651 aaPredicted RBP11.97□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 SCNN1DP51172 638 aa11.97□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 SLC12A3P55017 1021 aa11.97□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 TBC1D8BQ0IIM8 1120 aa11.97□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 ECM1Q16610 540 aa11.97□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 BMT2Q1RMZ1 405 aa11.97□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 TADA2BQ86TJ2 420 aa11.97□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 FAM76AQ8TAV0 307 aa11.97□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 IFT81Q8WYA0 676 aa11.97□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 LENG9Q96B70 501 aa11.97□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 CDK5RAP3Q96JB5 506 aa11.97□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 RPGRIP1Q96KN7 1286 aa11.97□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 MXD3Q9BW11 206 aa11.97□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 ANO3Q9BYT9 981 aa11.97□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 BCCIPQ9P287 314 aaKnown RBP eCLIP11.97□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 DUSP10Q9Y6W6 482 aa11.97□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 GHRHRQ02643 423 aa11.97□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 TRAPPC11Q7Z392 1133 aa11.97□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 GMLQ99445 158 aa11.97□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 POLR3CQ9BUI4 534 aaPredicted RBP11.97□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 NOC4LQ9BVI4 516 aaKnown RBP11.97□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 FAM169AQ9Y6X4 670 aa11.97□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 B4DLN1 442 aa11.97□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 NDUFAB1O14561 156 aa11.97□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 PJA2O43164 708 aa11.97□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 ATP1A1P05023 1023 aaKnown RBP11.97□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 GUCY2CP25092 1073 aa11.97□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 MAP2K2P36507 400 aa11.97□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 SLC1A4P43007 532 aa11.97□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 HERVK_113P62684 666 aa11.97□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 ITIH3Q06033 890 aa11.97□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 RUBCNQ92622 972 aa11.97□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 TSG101Q99816 390 aa11.97□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 NUDT12Q9BQG2 462 aa11.97□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 NDST4Q9H3R1 872 aa11.97□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 ESYT3A0FGR9 886 aa11.96□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 EIF4E1BA6NMX2 242 aaKnown RBP11.96□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 RPA1P27694 616 aa11.96□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 INPP5BP32019 993 aa11.96□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 COASYQ13057 564 aa11.96□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 SLC15A2Q16348 729 aa11.96□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 ABCB5Q2M3G0 1257 aa11.96□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 HAUS3Q68CZ6 603 aa11.96□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 EPM2AIP1Q7L775 607 aaPredicted RBP11.96□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 KCNK18Q7Z418 384 aa11.96□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 BANK1Q8NDB2 785 aa11.96□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 KAT2BQ92831 832 aa11.96□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 KCTD10Q9H3F6 313 aa11.96□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 KCNQ5Q9NR82 932 aa11.96□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 FAM184BQ9ULE4 1060 aa11.96□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 PCDHA1Q9Y5I3 950 aa11.96□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 SSU72P8A0A1W2PR75 194 aa11.96□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 SHTN1A0MZ66 631 aa11.96□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 F5H6K3 240 aa11.96□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 KIAA0754O94854 1291 aa11.96□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 APBA3O96018 575 aa11.96□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 MCCD1P59942 119 aaPredicted RBP11.96□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 FKBP3Q00688 224 aaKnown RBP11.96□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 KLRC3Q07444 240 aa11.96□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 ASTE1Q2TB18 679 aaPredicted RBP11.96□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 MYOCDQ8IZQ8 938 aa11.96□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 POTEMA6NI47 508 aa11.95□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 GUCY2FP51841 1108 aa11.95□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 ICA1Q05084 483 aa11.95□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 E2F5Q15329 346 aa11.95□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 UBE2SQ16763 222 aa11.95□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 SYDE2Q5VT97 1194 aa11.95□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 POTEAQ6S8J7 498 aa11.95□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 KCTD1Q719H9 257 aa11.95□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 CCDC65Q8IXS2 484 aa11.95□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 SYT2Q8N9I0 419 aaPredicted RBP11.95□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 FAM71BQ8TC56 605 aa11.95□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 CD248Q9HCU0 757 aa11.95□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 BMP2KQ9NSY1 1161 aaPredicted RBP11.95□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 TRAF3IP3Q9Y228 551 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms