RNA–Protein interactions for RNA: ENST00000614198.4

GGA3-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 3,438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-221ENST00000614198 CYP4A11Q02928 519 aa11.03□□□□□ -0.64
GGA3-221ENST00000614198 TMEM139Q8IV31 216 aa11.03□□□□□ -0.64
GGA3-221ENST00000614198 MSANTD4Q8NCY6 345 aa11.03□□□□□ -0.64
GGA3-221ENST00000614198 TAAR1Q96RJ0 339 aa11.03□□□□□ -0.64
GGA3-221ENST00000614198 RHOXF2Q9BQY4 288 aa11.03□□□□□ -0.64
GGA3-221ENST00000614198 ANKZF1Q9H8Y5 726 aa11.03□□□□□ -0.64
GGA3-221ENST00000614198 SLC38A10Q9HBR0 1119 aa11.03□□□□□ -0.64
GGA3-221ENST00000614198 RLFQ13129 1914 aa11.03□□□□□ -0.64
GGA3-221ENST00000614198 IKBKBO14920 756 aa11.03□□□□□ -0.64
GGA3-221ENST00000614198 CBFA2T2O43439 604 aa11.03□□□□□ -0.64
GGA3-221ENST00000614198 ARP10275 920 aa11.03□□□□□ -0.64
GGA3-221ENST00000614198 STAT6P42226 847 aa11.03□□□□□ -0.64
GGA3-221ENST00000614198 SRGAP1Q7Z6B7 1085 aa11.03□□□□□ -0.64
GGA3-221ENST00000614198 SH2D4AQ9H788 454 aa11.03□□□□□ -0.64
GGA3-221ENST00000614198 SUFUQ9UMX1 484 aa11.03□□□□□ -0.64
GGA3-221ENST00000614198 PAPPA2Q9BXP8 1791 aa11.03□□□□□ -0.64
GGA3-221ENST00000614198 NPHP3-ACAD11A0A0J9YXS1 232 aa11.03□□□□□ -0.64
GGA3-221ENST00000614198 PPP1R12BO60237 982 aaPredicted RBP11.03□□□□□ -0.64
GGA3-221ENST00000614198 NLRP12P59046 1061 aa11.03□□□□□ -0.64
GGA3-221ENST00000614198 CHMP4BP1P59074 171 aa11.03□□□□□ -0.64
GGA3-221ENST00000614198 PSMC6P62333 389 aa11.03□□□□□ -0.64
GGA3-221ENST00000614198 RPS6P62753 249 aaKnown RBP11.03□□□□□ -0.64
GGA3-221ENST00000614198 TUBB4BP68371 445 aa11.03□□□□□ -0.64
GGA3-221ENST00000614198 SNRNP48Q6IEG0 339 aaKnown RBP11.03□□□□□ -0.64
GGA3-221ENST00000614198 CABP7Q86V35 215 aa11.03□□□□□ -0.64
GGA3-221ENST00000614198 CRYGNQ8WXF5 182 aa11.03□□□□□ -0.64
GGA3-221ENST00000614198 L3MBTL3Q96JM7 780 aaPredicted RBP11.03□□□□□ -0.64
GGA3-221ENST00000614198 DISC1Q9NRI5 854 aa11.03□□□□□ -0.64
GGA3-221ENST00000614198 LRWD1Q9UFC0 647 aa11.03□□□□□ -0.64
GGA3-221ENST00000614198 GDAQ9Y2T3 454 aa11.03□□□□□ -0.64
GGA3-221ENST00000614198 MSH4O15457 936 aa11.02□□□□□ -0.64
GGA3-221ENST00000614198 ICAM1P05362 532 aa11.02□□□□□ -0.64
GGA3-221ENST00000614198 DYMQ7RTS9 669 aa11.02□□□□□ -0.64
GGA3-221ENST00000614198 MICALL1Q8N3F8 863 aa11.02□□□□□ -0.64
GGA3-221ENST00000614198 GLIS3Q8NEA6 775 aa11.02□□□□□ -0.64
GGA3-221ENST00000614198 OPTNQ96CV9 577 aa11.02□□□□□ -0.64
GGA3-221ENST00000614198 PNMA5Q96PV4 448 aa11.02□□□□□ -0.64
GGA3-221ENST00000614198 PAGR1Q9BTK6 254 aa11.02□□□□□ -0.64
GGA3-221ENST00000614198 WDR11Q9BZH6 1224 aa11.02□□□□□ -0.64
GGA3-221ENST00000614198 GCOM1H8Y6P7 765 aaPredicted RBP11.02□□□□□ -0.65
GGA3-221ENST00000614198 EML1O00423 815 aa11.02□□□□□ -0.65
GGA3-221ENST00000614198 POLR2MP0CAP2 368 aa11.02□□□□□ -0.65
GGA3-221ENST00000614198 ZNF76P36508 570 aa11.02□□□□□ -0.65
GGA3-221ENST00000614198 GRB10Q13322 594 aa11.02□□□□□ -0.65
GGA3-221ENST00000614198 FAM43BQ6ZT52 329 aaPredicted RBP11.02□□□□□ -0.65
GGA3-221ENST00000614198 VSTM4Q8IW00 320 aa11.02□□□□□ -0.65
GGA3-221ENST00000614198 RABEP2Q9H5N1 569 aa11.02□□□□□ -0.65
GGA3-221ENST00000614198 RGL1Q9NZL6 768 aa11.02□□□□□ -0.65
GGA3-221ENST00000614198 PCDHA12Q9UN75 941 aa11.02□□□□□ -0.65
GGA3-221ENST00000614198 CSADQ9Y600 493 aa11.02□□□□□ -0.65
GGA3-221ENST00000614198 POTEB3A0JP26 581 aa11.02□□□□□ -0.65
GGA3-221ENST00000614198 E9PMD0 336 aa11.02□□□□□ -0.65
GGA3-221ENST00000614198 CYP2C8P10632 490 aa11.02□□□□□ -0.65
GGA3-221ENST00000614198 MYCLP12524 364 aaPredicted RBP11.02□□□□□ -0.65
GGA3-221ENST00000614198 ERCC3P19447 782 aa11.02□□□□□ -0.65
GGA3-221ENST00000614198 ADKP55263 362 aaKnown RBP11.02□□□□□ -0.65
GGA3-221ENST00000614198 RRAGBQ5VZM2 374 aa11.02□□□□□ -0.65
GGA3-221ENST00000614198 POTEBQ6S5H4 581 aa11.02□□□□□ -0.65
GGA3-221ENST00000614198 HSD3B7Q9H2F3 369 aa11.02□□□□□ -0.65
GGA3-221ENST00000614198 ABCB6Q9NP58 842 aa11.02□□□□□ -0.65
GGA3-221ENST00000614198 BTBD7Q9P203 1132 aa11.02□□□□□ -0.65
GGA3-221ENST00000614198 TUBE1Q9UJT0 475 aa11.02□□□□□ -0.65
GGA3-221ENST00000614198 POTEFA5A3E0 1075 aa11.01□□□□□ -0.65
GGA3-221ENST00000614198 SPDYE16A6NNV3 312 aaPredicted RBP11.01□□□□□ -0.65
GGA3-221ENST00000614198 hCG_1984214I3L0E3 225 aa11.01□□□□□ -0.65
GGA3-221ENST00000614198 LONP1P36776 959 aaKnown RBP11.01□□□□□ -0.65
GGA3-221ENST00000614198 BAATQ14032 418 aaPredicted RBP11.01□□□□□ -0.65
GGA3-221ENST00000614198 ARL6IP4Q66PJ3 421 aaKnown RBP11.01□□□□□ -0.65
GGA3-221ENST00000614198 NCAPH2Q6IBW4 605 aa11.01□□□□□ -0.65
GGA3-221ENST00000614198 PPP1R18Q6NYC8 613 aa11.01□□□□□ -0.65
GGA3-221ENST00000614198 POTEGQ6S5H5 508 aa11.01□□□□□ -0.65
GGA3-221ENST00000614198 ZNF713Q8N859 430 aaPredicted RBP11.01□□□□□ -0.65
GGA3-221ENST00000614198 IGSF22Q8N9C0 903 aa11.01□□□□□ -0.65
GGA3-221ENST00000614198 LPAR1Q92633 364 aa11.01□□□□□ -0.65
GGA3-221ENST00000614198 TXNRD2Q9NNW7 524 aa11.01□□□□□ -0.65
GGA3-221ENST00000614198 ZNF214Q9UL59 606 aaPredicted RBP11.01□□□□□ -0.65
GGA3-221ENST00000614198 PARP14Q460N5 1801 aa11.01□□□□□ -0.65
GGA3-221ENST00000614198 MED24O75448 989 aa11.01□□□□□ -0.65
GGA3-221ENST00000614198 SSBP05455 408 aaKnown RBP eCLIP11.01□□□□□ -0.65
GGA3-221ENST00000614198 ITGB5P18084 799 aa11.01□□□□□ -0.65
GGA3-221ENST00000614198 CASP8Q14790 479 aa11.01□□□□□ -0.65
GGA3-221ENST00000614198 USP50Q70EL3 339 aaPredicted RBP11.01□□□□□ -0.65
GGA3-221ENST00000614198 FAM160B2Q86V87 743 aa11.01□□□□□ -0.65
GGA3-221ENST00000614198 SNX29Q8TEQ0 813 aa11.01□□□□□ -0.65
GGA3-221ENST00000614198 PNKPQ96T60 521 aa11.01□□□□□ -0.65
GGA3-221ENST00000614198 ACBD3Q9H3P7 528 aa11.01□□□□□ -0.65
GGA3-221ENST00000614198 PTPRFP10586 1907 aa11□□□□□ -0.65
GGA3-221ENST00000614198 IGLV3-22A0A075B6J6 115 aa11□□□□□ -0.65
GGA3-221ENST00000614198 NKRFO15226 690 aaKnown RBP eCLIP11□□□□□ -0.65
GGA3-221ENST00000614198 ERLIN2O94905 339 aa11□□□□□ -0.65
GGA3-221ENST00000614198 IBSPP21815 317 aaPredicted RBP11□□□□□ -0.65
GGA3-221ENST00000614198 USP8P40818 1118 aa11□□□□□ -0.65
GGA3-221ENST00000614198 CNTN2Q02246 1040 aa11□□□□□ -0.65
GGA3-221ENST00000614198 Q3C1V9 767 aa11□□□□□ -0.65
GGA3-221ENST00000614198 CATSPERGQ6ZRH7 1159 aa11□□□□□ -0.65
GGA3-221ENST00000614198 SH3RF1Q7Z6J0 888 aa11□□□□□ -0.65
GGA3-221ENST00000614198 CEP112Q8N8E3 955 aa11□□□□□ -0.65
GGA3-221ENST00000614198 ETNPPLQ8TBG4 499 aa11□□□□□ -0.65
GGA3-221ENST00000614198 KAT2BQ92831 832 aa11□□□□□ -0.65
GGA3-221ENST00000614198 CTDP1Q9Y5B0 961 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms