RNA–Protein interactions for RNA: ENST00000613988.4

CBWD1-223, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-223ENST00000613988 SETD4Q9NVD3 440 aa24.9■■□□□ 1.58
CBWD1-223ENST00000613988 PTPRSQ13332 1948 aa24.89■■□□□ 1.58
CBWD1-223ENST00000613988 GTPBP6O43824 516 aaPredicted RBP24.89■■□□□ 1.57
CBWD1-223ENST00000613988 ATP9AO75110 1047 aa24.89■■□□□ 1.57
CBWD1-223ENST00000613988 ARHGEF15O94989 841 aa24.89■■□□□ 1.57
CBWD1-223ENST00000613988 RASEFQ8IZ41 740 aa24.89■■□□□ 1.57
CBWD1-223ENST00000613988 TSPYL2Q9H2G4 693 aaPredicted RBP24.89■■□□□ 1.57
CBWD1-223ENST00000613988 PCDHA6Q9UN73 950 aa24.89■■□□□ 1.57
CBWD1-223ENST00000613988 PCDHA8Q9Y5H6 950 aa24.89■■□□□ 1.57
CBWD1-223ENST00000613988 ZBTB43O43298 467 aa24.88■■□□□ 1.57
CBWD1-223ENST00000613988 ITGB5P18084 799 aa24.88■■□□□ 1.57
CBWD1-223ENST00000613988 KRT32Q14532 448 aa24.88■■□□□ 1.57
CBWD1-223ENST00000613988 ADCK5Q3MIX3 580 aa24.88■■□□□ 1.57
CBWD1-223ENST00000613988 BRPF3Q9ULD4 1205 aa24.88■■□□□ 1.57
CBWD1-223ENST00000613988 TTC28Q96AY4 2481 aa24.87■■□□□ 1.57
CBWD1-223ENST00000613988 EPOPA6NHQ4 379 aa24.87■■□□□ 1.57
CBWD1-223ENST00000613988 RBAK-RBAKDNI3L0D1 243 aa24.87■■□□□ 1.57
CBWD1-223ENST00000613988 GJB5O95377 273 aa24.87■■□□□ 1.57
CBWD1-223ENST00000613988 KCNA2P16389 499 aa24.87■■□□□ 1.57
CBWD1-223ENST00000613988 MTMR1Q13613 665 aa24.87■■□□□ 1.57
CBWD1-223ENST00000613988 RTN1Q16799 776 aa24.87■■□□□ 1.57
CBWD1-223ENST00000613988 DBF4BQ8NFT6 615 aa24.87■■□□□ 1.57
CBWD1-223ENST00000613988 RAD9AQ99638 391 aa24.87■■□□□ 1.57
CBWD1-223ENST00000613988 EHMT1Q9H9B1 1298 aa24.87■■□□□ 1.57
CBWD1-223ENST00000613988 UBIAD1Q9Y5Z9 338 aa24.87■■□□□ 1.57
CBWD1-223ENST00000613988 MTCH2Q9Y6C9 303 aa24.87■■□□□ 1.57
CBWD1-223ENST00000613988 LCHNA4D1U4 455 aa24.86■■□□□ 1.57
CBWD1-223ENST00000613988 POU3F3P20264 500 aaPredicted RBP24.86■■□□□ 1.57
CBWD1-223ENST00000613988 PSMA5P28066 241 aa24.86■■□□□ 1.57
CBWD1-223ENST00000613988 TCF7P36402 384 aaPredicted RBP24.86■■□□□ 1.57
CBWD1-223ENST00000613988 ARHGAP4P98171 946 aa24.86■■□□□ 1.57
CBWD1-223ENST00000613988 WWC2Q6AWC2 1192 aa24.86■■□□□ 1.57
CBWD1-223ENST00000613988 PKD2L1Q9P0L9 805 aa24.86■■□□□ 1.57
CBWD1-223ENST00000613988 REV3LO60673 3130 aa24.86■■□□□ 1.57
CBWD1-223ENST00000613988 CNTNAP5Q8WYK1 1306 aa24.86■■□□□ 1.57
CBWD1-223ENST00000613988 MAFGO15525 162 aa24.85■■□□□ 1.57
CBWD1-223ENST00000613988 CAND2O75155 1236 aa24.85■■□□□ 1.57
CBWD1-223ENST00000613988 MCM2P49736 904 aa24.85■■□□□ 1.57
CBWD1-223ENST00000613988 NAPAP54920 295 aa24.85■■□□□ 1.57
CBWD1-223ENST00000613988 MRPS5P82675 430 aaKnown RBP24.85■■□□□ 1.57
CBWD1-223ENST00000613988 FAM117BQ6P1L5 589 aa24.85■■□□□ 1.57
CBWD1-223ENST00000613988 SEPT1Q8WYJ6 367 aa24.85■■□□□ 1.57
CBWD1-223ENST00000613988 ASB2Q96Q27 587 aa24.85■■□□□ 1.57
CBWD1-223ENST00000613988 JADE2Q9NQC1 790 aa24.85■■□□□ 1.57
CBWD1-223ENST00000613988 V9GY48 417 aaPredicted RBP24.85■■□□□ 1.57
CBWD1-223ENST00000613988 PRRC2BQ5JSZ5 2229 aaKnown RBP24.85■■□□□ 1.57
CBWD1-223ENST00000613988 KAT6AQ92794 2004 aa24.84■■□□□ 1.57
CBWD1-223ENST00000613988 HMGB1P09429 215 aaKnown RBP24.84■■□□□ 1.57
CBWD1-223ENST00000613988 CTSHP09668 335 aa24.84■■□□□ 1.57
CBWD1-223ENST00000613988 NEK4P51957 841 aa24.84■■□□□ 1.57
CBWD1-223ENST00000613988 PLEKHG4Q58EX7 1191 aa24.84■■□□□ 1.57
CBWD1-223ENST00000613988 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.84■■□□□ 1.57
CBWD1-223ENST00000613988 SPRED2Q7Z698 418 aa24.84■■□□□ 1.57
CBWD1-223ENST00000613988 LMBR1Q8WVP7 490 aa24.84■■□□□ 1.57
CBWD1-223ENST00000613988 NRCAMQ92823 1304 aa24.84■■□□□ 1.57
CBWD1-223ENST00000613988 KLF18A0A0U1RQI7 1052 aa24.83■■□□□ 1.57
CBWD1-223ENST00000613988 GSTTP1A0A1W2PQM5 241 aa24.83■■□□□ 1.57
CBWD1-223ENST00000613988 GOLGA8AA7E2F4 631 aa24.83■■□□□ 1.57
CBWD1-223ENST00000613988 GOLGA8BA8MQT2 603 aa24.83■■□□□ 1.57
CBWD1-223ENST00000613988 AMHP03971 560 aa24.83■■□□□ 1.57
CBWD1-223ENST00000613988 ADAM17P78536 824 aa24.83■■□□□ 1.57
CBWD1-223ENST00000613988 FGD1P98174 961 aa24.83■■□□□ 1.57
CBWD1-223ENST00000613988 FUT2Q10981 343 aa24.83■■□□□ 1.57
CBWD1-223ENST00000613988 SKIV2LQ15477 1246 aaKnown RBP24.83■■□□□ 1.57
CBWD1-223ENST00000613988 SEPT8Q92599 483 aa24.83■■□□□ 1.57
CBWD1-223ENST00000613988 RIC8AQ9NPQ8 531 aa24.83■■□□□ 1.57
CBWD1-223ENST00000613988 NAP1L2Q9ULW6 460 aaPredicted RBP24.83■■□□□ 1.57
CBWD1-223ENST00000613988 GRB10Q13322 594 aa24.82■■□□□ 1.56
CBWD1-223ENST00000613988 KRT40Q6A162 431 aa24.82■■□□□ 1.56
CBWD1-223ENST00000613988 TYW1BQ6NUM6 668 aa24.82■■□□□ 1.56
CBWD1-223ENST00000613988 PPP1R18Q6NYC8 613 aa24.82■■□□□ 1.56
CBWD1-223ENST00000613988 GLG1Q92896 1179 aa24.82■■□□□ 1.56
CBWD1-223ENST00000613988 ZSWIM6Q9HCJ5 1215 aa24.82■■□□□ 1.56
CBWD1-223ENST00000613988 ERAP1Q9NZ08 941 aa24.82■■□□□ 1.56
CBWD1-223ENST00000613988 XIRP2A4UGR9 3374 aa24.82■■□□□ 1.56
CBWD1-223ENST00000613988 ADCY7P51828 1080 aa24.81■■□□□ 1.56
CBWD1-223ENST00000613988 TEX2Q8IWB9 1127 aa24.81■■□□□ 1.56
CBWD1-223ENST00000613988 MYOCDQ8IZQ8 938 aa24.81■■□□□ 1.56
CBWD1-223ENST00000613988 MXRA8Q9BRK3 442 aa24.81■■□□□ 1.56
CBWD1-223ENST00000613988 SMCO2A6NFE2 343 aa24.8■■□□□ 1.56
CBWD1-223ENST00000613988 hCG_1984214I3L0E3 225 aa24.8■■□□□ 1.56
CBWD1-223ENST00000613988 K7ELQ4 463 aaPredicted RBP24.8■■□□□ 1.56
CBWD1-223ENST00000613988 FOSP01100 380 aaPredicted RBP24.8■■□□□ 1.56
CBWD1-223ENST00000613988 MARK3P27448 753 aa24.8■■□□□ 1.56
CBWD1-223ENST00000613988 PPFIA1Q13136 1202 aa24.8■■□□□ 1.56
CBWD1-223ENST00000613988 ZNF713Q8N859 430 aaPredicted RBP24.8■■□□□ 1.56
CBWD1-223ENST00000613988 JAKMIP1Q96N16 626 aaKnown RBP24.8■■□□□ 1.56
CBWD1-223ENST00000613988 OSBPL7Q9BZF2 842 aa24.8■■□□□ 1.56
CBWD1-223ENST00000613988 SMARCAD1Q9H4L7 1026 aa24.8■■□□□ 1.56
CBWD1-223ENST00000613988 KCNH7Q9NS40 1196 aa24.8■■□□□ 1.56
CBWD1-223ENST00000613988 FAM217BQ9NTX9 383 aaPredicted RBP24.8■■□□□ 1.56
CBWD1-223ENST00000613988 MTUS1Q9ULD2 1270 aa24.8■■□□□ 1.56
CBWD1-223ENST00000613988 INSL6Q9Y581 213 aa24.8■■□□□ 1.56
CBWD1-223ENST00000613988 CYP46A1Q9Y6A2 500 aa24.8■■□□□ 1.56
CBWD1-223ENST00000613988 MICAL3Q7RTP6 2002 aa24.8■■□□□ 1.56
CBWD1-223ENST00000613988 STXBP3O00186 592 aa24.8■■□□□ 1.56
CBWD1-223ENST00000613988 CDC27P30260 824 aa24.8■■□□□ 1.56
CBWD1-223ENST00000613988 RCAN1P53805 252 aa24.8■■□□□ 1.56
CBWD1-223ENST00000613988 MKRN4PQ13434 485 aaPredicted RBP24.8■■□□□ 1.56
CBWD1-223ENST00000613988 FAM26DQ5JW98 314 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms