RNA–Protein interactions for RNA: ENST00000613941.4

SRSF3-204, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 4

Gene SRSF3, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-204ENST00000613941 SYTL5Q8TDW5 730 aaPredicted RBP12.33□□□□□ -0.44
SRSF3-204ENST00000613941 MICAL1Q8TDZ2 1067 aa12.33□□□□□ -0.44
SRSF3-204ENST00000613941 NSUN6Q8TEA1 469 aaKnown RBP12.33□□□□□ -0.44
SRSF3-204ENST00000613941 ATP8B4Q8TF62 1192 aa12.33□□□□□ -0.44
SRSF3-204ENST00000613941 RMDN3Q96TC7 470 aa12.33□□□□□ -0.44
SRSF3-204ENST00000613941 SEC62Q99442 399 aaKnown RBP12.33□□□□□ -0.44
SRSF3-204ENST00000613941 HINFPQ9BQA5 517 aa12.33□□□□□ -0.44
SRSF3-204ENST00000613941 NAPBQ9H115 298 aa12.33□□□□□ -0.44
SRSF3-204ENST00000613941 CPVLQ9H3G5 476 aa12.33□□□□□ -0.44
SRSF3-204ENST00000613941 CHD8Q9HCK8 2581 aa12.32□□□□□ -0.44
SRSF3-204ENST00000613941 PATL2C9JE40 543 aaKnown RBP12.32□□□□□ -0.44
SRSF3-204ENST00000613941 ENPP3O14638 875 aa12.32□□□□□ -0.44
SRSF3-204ENST00000613941 PI15O43692 258 aa12.32□□□□□ -0.44
SRSF3-204ENST00000613941 RANBP6O60518 1105 aaKnown RBP12.32□□□□□ -0.44
SRSF3-204ENST00000613941 GGPS1O95749 300 aa12.32□□□□□ -0.44
SRSF3-204ENST00000613941 SLC3A2P08195 630 aaKnown RBP12.32□□□□□ -0.44
SRSF3-204ENST00000613941 GNAT2P19087 354 aa12.32□□□□□ -0.44
SRSF3-204ENST00000613941 TECP42680 631 aa12.32□□□□□ -0.44
SRSF3-204ENST00000613941 PPP4R3BQ5MIZ7 849 aa12.32□□□□□ -0.44
SRSF3-204ENST00000613941 MYSM1Q5VVJ2 828 aa12.32□□□□□ -0.44
SRSF3-204ENST00000613941 LLGL2Q6P1M3 1020 aa12.32□□□□□ -0.44
SRSF3-204ENST00000613941 UBALD2Q8IYN6 164 aa12.32□□□□□ -0.44
SRSF3-204ENST00000613941 LINC01599Q8WXQ3 324 aa12.32□□□□□ -0.44
SRSF3-204ENST00000613941 S1PR5Q9H228 398 aa12.32□□□□□ -0.44
SRSF3-204ENST00000613941 SETD4Q9NVD3 440 aa12.32□□□□□ -0.44
SRSF3-204ENST00000613941 RALYQ9UKM9 306 aaKnown RBP12.32□□□□□ -0.44
SRSF3-204ENST00000613941 R4GN57 208 aa12.32□□□□□ -0.44
SRSF3-204ENST00000613941 EVPLQ92817 2033 aa12.32□□□□□ -0.44
SRSF3-204ENST00000613941 H3BRB1 525 aa12.31□□□□□ -0.44
SRSF3-204ENST00000613941 RNF113AO15541 343 aaKnown RBP12.31□□□□□ -0.44
SRSF3-204ENST00000613941 CAND2O75155 1236 aa12.31□□□□□ -0.44
SRSF3-204ENST00000613941 PPFIA4O75335 1185 aa12.31□□□□□ -0.44
SRSF3-204ENST00000613941 LMNAP02545 664 aaKnown RBP12.31□□□□□ -0.44
SRSF3-204ENST00000613941 CHRNA1P02708 482 aa12.31□□□□□ -0.44
SRSF3-204ENST00000613941 LGALS2P05162 132 aa12.31□□□□□ -0.44
SRSF3-204ENST00000613941 PDHBP11177 359 aa12.31□□□□□ -0.44
SRSF3-204ENST00000613941 IBSPP21815 317 aaPredicted RBP12.31□□□□□ -0.44
SRSF3-204ENST00000613941 LPIN1Q14693 890 aa12.31□□□□□ -0.44
SRSF3-204ENST00000613941 DUSP6Q16828 381 aa12.31□□□□□ -0.44
SRSF3-204ENST00000613941 CELF3Q5SZQ8 465 aaKnown RBP12.31□□□□□ -0.44
SRSF3-204ENST00000613941 ARHGEF16Q5VV41 709 aa12.31□□□□□ -0.44
SRSF3-204ENST00000613941 ANKRD54Q6NXT1 300 aa12.31□□□□□ -0.44
SRSF3-204ENST00000613941 SYCE2Q6PIF2 218 aa12.31□□□□□ -0.44
SRSF3-204ENST00000613941 DCLK2Q8N568 766 aa12.31□□□□□ -0.44
SRSF3-204ENST00000613941 KBTBD3Q8NAB2 608 aa12.31□□□□□ -0.44
SRSF3-204ENST00000613941 GPKOWQ92917 476 aaPredicted RBP eCLIP12.31□□□□□ -0.442e-17■□□□□ 8
SRSF3-204ENST00000613941 ZFP91Q96JP5 570 aaPredicted RBP12.31□□□□□ -0.44
SRSF3-204ENST00000613941 TMEM47Q9BQJ4 181 aa12.31□□□□□ -0.44
SRSF3-204ENST00000613941 POMKQ9H5K3 350 aa12.31□□□□□ -0.44
SRSF3-204ENST00000613941 TUT1Q9H6E5 874 aaKnown RBP12.31□□□□□ -0.44
SRSF3-204ENST00000613941 CACNA1IQ9P0X4 2223 aa12.31□□□□□ -0.44
SRSF3-204ENST00000613941 BAZ2BQ9UIF8 2168 aaKnown RBP12.3□□□□□ -0.44
SRSF3-204ENST00000613941 SMARCA5O60264 1052 aaPredicted RBP12.3□□□□□ -0.44
SRSF3-204ENST00000613941 NR3C2P08235 984 aa12.3□□□□□ -0.44
SRSF3-204ENST00000613941 GOLGA8HP0CJ92 632 aa12.3□□□□□ -0.44
SRSF3-204ENST00000613941 MYCLP12524 364 aaPredicted RBP12.3□□□□□ -0.44
SRSF3-204ENST00000613941 UBA1P22314 1058 aaKnown RBP12.3□□□□□ -0.44
SRSF3-204ENST00000613941 NOVP48745 357 aa12.3□□□□□ -0.44
SRSF3-204ENST00000613941 CLCN5P51795 746 aa12.3□□□□□ -0.44
SRSF3-204ENST00000613941 ERVFC1P60507 584 aa12.3□□□□□ -0.44
SRSF3-204ENST00000613941 SP2Q02086 613 aa12.3□□□□□ -0.44
SRSF3-204ENST00000613941 ST3GAL2Q16842 350 aa12.3□□□□□ -0.44
SRSF3-204ENST00000613941 NAALADL2Q58DX5 795 aa12.3□□□□□ -0.44
SRSF3-204ENST00000613941 FAM26DQ5JW98 314 aa12.3□□□□□ -0.44
SRSF3-204ENST00000613941 TSHZ3Q63HK5 1081 aa12.3□□□□□ -0.44
SRSF3-204ENST00000613941 TRIM50Q86XT4 487 aa12.3□□□□□ -0.44
SRSF3-204ENST00000613941 CCDC105Q8IYK2 499 aa12.3□□□□□ -0.44
SRSF3-204ENST00000613941 CMTR2Q8IYT2 770 aaKnown RBP12.3□□□□□ -0.44
SRSF3-204ENST00000613941 IWS1Q96ST2 819 aa12.3□□□□□ -0.44
SRSF3-204ENST00000613941 NACAP1Q9BZK3 213 aa12.3□□□□□ -0.44
SRSF3-204ENST00000613941 BCAS3Q9H6U6 928 aa12.3□□□□□ -0.44
SRSF3-204ENST00000613941 PXMP2Q9NR77 195 aa12.3□□□□□ -0.44
SRSF3-204ENST00000613941 DLL3Q9NYJ7 618 aa12.3□□□□□ -0.44
SRSF3-204ENST00000613941 NR2E1Q9Y466 385 aa12.3□□□□□ -0.44
SRSF3-204ENST00000613941 CCDC171Q6TFL3 1326 aa12.3□□□□□ -0.44
SRSF3-204ENST00000613941 EIF3JO75822 258 aaKnown RBP12.29□□□□□ -0.44
SRSF3-204ENST00000613941 ARHGAP4P98171 946 aa12.29□□□□□ -0.44
SRSF3-204ENST00000613941 ZNF543Q08ER8 600 aa12.29□□□□□ -0.44
SRSF3-204ENST00000613941 RSPO4Q2I0M5 234 aaPredicted RBP12.29□□□□□ -0.44
SRSF3-204ENST00000613941 PLPP4Q5VZY2 271 aa12.29□□□□□ -0.44
SRSF3-204ENST00000613941 RUFY4Q6ZNE9 571 aa12.29□□□□□ -0.44
SRSF3-204ENST00000613941 SIRT2Q8IXJ6 389 aa12.29□□□□□ -0.44
SRSF3-204ENST00000613941 RGS22Q8NE09 1264 aa12.29□□□□□ -0.44
SRSF3-204ENST00000613941 CYP2W1Q8TAV3 490 aa12.29□□□□□ -0.44
SRSF3-204ENST00000613941 LMBR1Q8WVP7 490 aa12.29□□□□□ -0.44
SRSF3-204ENST00000613941 UBA5Q9GZZ9 404 aa12.29□□□□□ -0.44
SRSF3-204ENST00000613941 EHMT1Q9H9B1 1298 aa12.29□□□□□ -0.44
SRSF3-204ENST00000613941 HCSTQ9UBK5 93 aa12.29□□□□□ -0.44
SRSF3-204ENST00000613941 PNMA2Q9UL42 364 aa12.29□□□□□ -0.44
SRSF3-204ENST00000613941 PATJQ8NI35 1801 aa12.29□□□□□ -0.44
SRSF3-204ENST00000613941 RAB11FIP3O75154 756 aa12.28□□□□□ -0.44
SRSF3-204ENST00000613941 WEE2P0C1S8 567 aa12.28□□□□□ -0.44
SRSF3-204ENST00000613941 TOP1P11387 765 aaKnown RBP12.28□□□□□ -0.44
SRSF3-204ENST00000613941 AOC1P19801 751 aa12.28□□□□□ -0.44
SRSF3-204ENST00000613941 MGAT3Q09327 533 aa12.28□□□□□ -0.44
SRSF3-204ENST00000613941 APOBRQ0VD83 1088 aa12.28□□□□□ -0.44
SRSF3-204ENST00000613941 KCNC3Q14003 757 aa12.28□□□□□ -0.44
SRSF3-204ENST00000613941 CDC37Q16543 378 aaPredicted RBP12.28□□□□□ -0.44
SRSF3-204ENST00000613941 RRP12Q5JTH9 1297 aaKnown RBP12.28□□□□□ -0.44
SRSF3-204ENST00000613941 DTWD2Q8NBA8 298 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms