RNA–Protein interactions for RNA: ENST00000613394.4

HPS1-215, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS1, Length 3,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-215ENST00000613394 NT5C3AQ9H0P0 336 aa15.14■□□□□ 0.01
HPS1-215ENST00000613394 AKAP11Q9UKA4 1901 aa15.13■□□□□ 0.01
HPS1-215ENST00000613394 FLT1P17948 1338 aa15.13■□□□□ 0.01
HPS1-215ENST00000613394 DDX39AO00148 427 aaKnown RBP15.13■□□□□ 0.01
HPS1-215ENST00000613394 PDHBP11177 359 aa15.13■□□□□ 0.01
HPS1-215ENST00000613394 B4GALNT4Q76KP1 1039 aa15.13■□□□□ 0.01
HPS1-215ENST00000613394 KIAA0825Q8IV33 1275 aa15.13■□□□□ 0.01
HPS1-215ENST00000613394 MYH15Q9Y2K3 1946 aa15.13■□□□□ 0.01
HPS1-215ENST00000613394 FLOT1O75955 427 aa15.13■□□□□ 0.01
HPS1-215ENST00000613394 GRAPQ13588 217 aa15.13■□□□□ 0.01
HPS1-215ENST00000613394 CCDC121Q6ZUS5 278 aa15.13■□□□□ 0.01
HPS1-215ENST00000613394 GRAPLQ8TC17 118 aaPredicted RBP15.13■□□□□ 0.01
HPS1-215ENST00000613394 CEP72Q9P209 647 aa15.13■□□□□ 0.01
HPS1-215ENST00000613394 SERPINB13Q9UIV8 391 aa15.13■□□□□ 0.01
HPS1-215ENST00000613394 ATP6V0A2Q9Y487 856 aa15.13■□□□□ 0.01
HPS1-215ENST00000613394 NID2Q14112 1375 aa15.13■□□□□ 0.01
HPS1-215ENST00000613394 LRRN2O75325 713 aa15.13■□□□□ 0.01
HPS1-215ENST00000613394 H2AFZP0C0S5 128 aa15.13■□□□□ 0.01
HPS1-215ENST00000613394 TAL1P17542 331 aaPredicted RBP15.13■□□□□ 0.01
HPS1-215ENST00000613394 H2AFVQ71UI9 128 aa15.13■□□□□ 0.01
HPS1-215ENST00000613394 PIGOQ8TEQ8 1089 aa15.13■□□□□ 0.01
HPS1-215ENST00000613394 DYDC1Q8WWB3 177 aa15.13■□□□□ 0.01
HPS1-215ENST00000613394 IQCDQ96DY2 449 aa15.13■□□□□ 0.01
HPS1-215ENST00000613394 COL1A1P02452 1464 aaPredicted RBP15.12■□□□□ 0.01
HPS1-215ENST00000613394 RASSF10A6NK89 507 aa15.12■□□□□ 0.01
HPS1-215ENST00000613394 MEX3CQ5U5Q3 659 aaKnown RBP15.12■□□□□ 0.01
HPS1-215ENST00000613394 PACS2Q86VP3 889 aa15.12■□□□□ 0.01
HPS1-215ENST00000613394 SFR1Q86XK3 245 aa15.12■□□□□ 0.01
HPS1-215ENST00000613394 MMGT1Q8N4V1 131 aa15.12■□□□□ 0.01
HPS1-215ENST00000613394 NUCKS1Q9H1E3 243 aaKnown RBP15.12■□□□□ 0.01
HPS1-215ENST00000613394 BHMT2Q9H2M3 363 aa15.12■□□□□ 0.01
HPS1-215ENST00000613394 TTLL1O95922 423 aa15.12■□□□□ 0.01
HPS1-215ENST00000613394 CFBP00751 764 aa15.12■□□□□ 0.01
HPS1-215ENST00000613394 GJB7Q6PEY0 223 aa15.12■□□□□ 0.01
HPS1-215ENST00000613394 PLEKHG2Q9H7P9 1386 aa15.12■□□□□ 0.01
HPS1-215ENST00000613394 DCCP43146 1447 aa15.12■□□□□ 0.01
HPS1-215ENST00000613394 RAD51CO43502 376 aa15.12■□□□□ 0.01
HPS1-215ENST00000613394 FGRP09769 529 aa15.12■□□□□ 0.01
HPS1-215ENST00000613394 CORO7P57737 925 aa15.12■□□□□ 0.01
HPS1-215ENST00000613394 ASPRV1Q53RT3 343 aa15.12■□□□□ 0.01
HPS1-215ENST00000613394 ALS2CLQ60I27 953 aa15.12■□□□□ 0.01
HPS1-215ENST00000613394 ATP8A1Q9Y2Q0 1164 aa15.12■□□□□ 0.01
HPS1-215ENST00000613394 UBAP1LF5GYI3 381 aa15.11■□□□□ 0.01
HPS1-215ENST00000613394 RPS6KA4O75676 772 aa15.11■□□□□ 0.01
HPS1-215ENST00000613394 GDF11O95390 407 aa15.11■□□□□ 0.01
HPS1-215ENST00000613394 SSR1P43307 286 aaKnown RBP15.11■□□□□ 0.01
HPS1-215ENST00000613394 MKRN4PQ13434 485 aaPredicted RBP15.11■□□□□ 0.01
HPS1-215ENST00000613394 KLHDC7AQ5VTJ3 777 aa15.11■□□□□ 0.01
HPS1-215ENST00000613394 GBP6Q6ZN66 633 aa15.11■□□□□ 0.01
HPS1-215ENST00000613394 CABS1Q96KC9 395 aa15.11■□□□□ 0.01
HPS1-215ENST00000613394 SCLT1Q96NL6 688 aa15.11■□□□□ 0.01
HPS1-215ENST00000613394 AMACRQ9UHK6 382 aa15.11■□□□□ 0.01
HPS1-215ENST00000613394 SIK3Q9Y2K2 1263 aa15.11■□□□□ 0.01
HPS1-215ENST00000613394 PNMA6FA0A0J9YX94 578 aa15.11■□□□□ 0.01
HPS1-215ENST00000613394 EIF3HO15372 352 aaKnown RBP eCLIP15.11■□□□□ 0.01
HPS1-215ENST00000613394 RPL13P26373 211 aaKnown RBP15.11■□□□□ 0.01
HPS1-215ENST00000613394 RNPC3Q96LT9 517 aaKnown RBP15.11■□□□□ 0.01
HPS1-215ENST00000613394 FGFBP2Q9BYJ0 223 aa15.11■□□□□ 0.01
HPS1-215ENST00000613394 FECHP22830 423 aa15.1■□□□□ 0.01
HPS1-215ENST00000613394 HS2ST1Q7LGA3 356 aa15.1■□□□□ 0.01
HPS1-215ENST00000613394 KSR1Q8IVT5 923 aa15.1■□□□□ 0.01
HPS1-215ENST00000613394 ARFGAP2Q8N6H7 521 aa15.1■□□□□ 0.01
HPS1-215ENST00000613394 LMBR1Q8WVP7 490 aa15.1■□□□□ 0.01
HPS1-215ENST00000613394 CTNNBL1Q8WYA6 563 aaPredicted RBP15.1■□□□□ 0.01
HPS1-215ENST00000613394 MTMR4Q9NYA4 1195 aa15.1■□□□□ 0.01
HPS1-215ENST00000613394 GCNT4Q9P109 453 aa15.1■□□□□ 0.01
HPS1-215ENST00000613394 NOVA2Q9UNW9 492 aaKnown RBP15.1■□□□□ 0.01
HPS1-215ENST00000613394 A0A1W2PQJ5 194 aa15.1■□□□□ 0.01
HPS1-215ENST00000613394 COPB2P35606 906 aa15.1■□□□□ 0.01
HPS1-215ENST00000613394 ZNF211Q13398 564 aaPredicted RBP15.1■□□□□ 0.01
HPS1-215ENST00000613394 DAGLBQ8NCG7 672 aa15.1■□□□□ 0.01
HPS1-215ENST00000613394 TRPM3Q9HCF6 1732 aaPredicted RBP15.1■□□□□ 0.01
HPS1-215ENST00000613394 SPATA31A1Q5TZJ5 1347 aa15.1■□□□□ 0.01
HPS1-215ENST00000613394 AGPSO00116 658 aa15.1■□□□□ 0.01
HPS1-215ENST00000613394 GNA14O95837 355 aa15.1■□□□□ 0.01
HPS1-215ENST00000613394 TNFAIP3P21580 790 aa15.1■□□□□ 0.01
HPS1-215ENST00000613394 STAT1P42224 750 aa15.1■□□□□ 0.01
HPS1-215ENST00000613394 PTK2Q05397 1052 aa15.1■□□□□ 0.01
HPS1-215ENST00000613394 DHX9Q08211 1270 aaKnown RBP15.1■□□□□ 0.01
HPS1-215ENST00000613394 SLFN13Q68D06 897 aa15.1■□□□□ 0.01
HPS1-215ENST00000613394 CCDC26Q8TAB7 109 aa15.1■□□□□ 0.01
HPS1-215ENST00000613394 AENQ8WTP8 325 aaKnown RBP15.1■□□□□ 0.01
HPS1-215ENST00000613394 LRRC45Q96CN5 670 aa15.1■□□□□ 0.01
HPS1-215ENST00000613394 TTYH3Q9C0H2 523 aa15.1■□□□□ 0.01
HPS1-215ENST00000613394 KDM3AQ9Y4C1 1321 aa15.09■□□□□ 0.01
HPS1-215ENST00000613394 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.09■□□□□ 0.01
HPS1-215ENST00000613394 AFPP02771 609 aaKnown RBP15.09■□□□□ 0.01
HPS1-215ENST00000613394 CASKIN2Q8WXE0 1202 aa15.09■□□□□ 0.01
HPS1-215ENST00000613394 JMJD4Q9H9V9 463 aa15.09■□□□□ 0.01
HPS1-215ENST00000613394 UTP11Q9Y3A2 253 aaKnown RBP15.09■□□□□ 0.01
HPS1-215ENST00000613394 MYH6P13533 1939 aa15.09■□□□□ 0.01
HPS1-215ENST00000613394 DAPK3O43293 454 aa15.09■□□□□ 0.01
HPS1-215ENST00000613394 CALUO43852 315 aaPredicted RBP15.09■□□□□ 0.01
HPS1-215ENST00000613394 AARSP49588 968 aaKnown RBP eCLIP15.09■□□□□ 0.01
HPS1-215ENST00000613394 SLC18A3Q16572 532 aa15.09■□□□□ 0.01
HPS1-215ENST00000613394 ICE2Q659A1 982 aa15.09■□□□□ 0.01
HPS1-215ENST00000613394 C16orf86Q6ZW13 317 aa15.09■□□□□ 0.01
HPS1-215ENST00000613394 RBM17Q96I25 401 aaKnown RBP15.09■□□□□ 0.01
HPS1-215ENST00000613394 ANO3Q9BYT9 981 aa15.09■□□□□ 0.01
HPS1-215ENST00000613394 C4AP0C0L4 1744 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms