RNA–Protein interactions for RNA: ENST00000611855.4

CDH4-202, Transcript of cadherin 4, humanhuman

TSL 5 BASIC

Gene CDH4, Length 3,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-202ENST00000611855 TMED8Q6PL24 325 aaPredicted RBP12.08□□□□□ -0.48
CDH4-202ENST00000611855 TBCKQ8TEA7 893 aa12.08□□□□□ -0.48
CDH4-202ENST00000611855 CALML4Q96GE6 196 aa12.08□□□□□ -0.48
CDH4-202ENST00000611855 MAD2L2Q9UI95 211 aa12.08□□□□□ -0.48
CDH4-202ENST00000611855 DOCK2Q92608 1830 aa12.08□□□□□ -0.48
CDH4-202ENST00000611855 SMCO2A6NFE2 343 aa12.08□□□□□ -0.48
CDH4-202ENST00000611855 TRAPPC3O43617 180 aa12.08□□□□□ -0.48
CDH4-202ENST00000611855 HNRNPH3P31942 346 aaKnown RBP12.08□□□□□ -0.48
CDH4-202ENST00000611855 SNX1Q13596 522 aa12.08□□□□□ -0.48
CDH4-202ENST00000611855 UAP1Q16222 522 aaPredicted RBP12.08□□□□□ -0.48
CDH4-202ENST00000611855 FIGNQ5HY92 759 aa12.08□□□□□ -0.48
CDH4-202ENST00000611855 CAPRIN2Q6IMN6 1127 aaKnown RBP12.08□□□□□ -0.48
CDH4-202ENST00000611855 USP17L2Q6R6M4 530 aa12.08□□□□□ -0.48
CDH4-202ENST00000611855 NSUN4Q96CB9 384 aaKnown RBP12.08□□□□□ -0.48
CDH4-202ENST00000611855 FAM84BQ96KN1 310 aaPredicted RBP12.08□□□□□ -0.48
CDH4-202ENST00000611855 NLRP3Q96P20 1036 aa12.08□□□□□ -0.48
CDH4-202ENST00000611855 C7orf25Q9BPX7 421 aa12.08□□□□□ -0.48
CDH4-202ENST00000611855 CELF4Q9BZC1 486 aaKnown RBP12.08□□□□□ -0.48
CDH4-202ENST00000611855 CRNKL1Q9BZJ0 848 aaKnown RBP12.08□□□□□ -0.48
CDH4-202ENST00000611855 UBA5Q9GZZ9 404 aa12.08□□□□□ -0.48
CDH4-202ENST00000611855 M0R2N6 131 aa12.07□□□□□ -0.48
CDH4-202ENST00000611855 CTNND1O60716 968 aaKnown RBP12.07□□□□□ -0.48
CDH4-202ENST00000611855 ACTN1P12814 892 aa12.07□□□□□ -0.48
CDH4-202ENST00000611855 ITGA4P13612 1032 aa12.07□□□□□ -0.48
CDH4-202ENST00000611855 ASTE1Q2TB18 679 aaPredicted RBP12.07□□□□□ -0.48
CDH4-202ENST00000611855 CCDC84Q86UT8 332 aaPredicted RBP12.07□□□□□ -0.48
CDH4-202ENST00000611855 SPDYE1Q8NFV5 336 aaPredicted RBP12.07□□□□□ -0.48
CDH4-202ENST00000611855 TAF4BQ92750 862 aa12.07□□□□□ -0.48
CDH4-202ENST00000611855 SAAL1Q96ER3 474 aa12.07□□□□□ -0.48
CDH4-202ENST00000611855 PAGR1Q9BTK6 254 aa12.07□□□□□ -0.48
CDH4-202ENST00000611855 FBXL5Q9UKA1 691 aa12.07□□□□□ -0.48
CDH4-202ENST00000611855 STK38LQ9Y2H1 464 aa12.07□□□□□ -0.48
CDH4-202ENST00000611855 GRID2IPA4D2P6 1211 aa12.07□□□□□ -0.48
CDH4-202ENST00000611855 COPB2P35606 906 aa12.07□□□□□ -0.48
CDH4-202ENST00000611855 PPP2R2AP63151 447 aa12.07□□□□□ -0.48
CDH4-202ENST00000611855 GRB10Q13322 594 aa12.07□□□□□ -0.48
CDH4-202ENST00000611855 THEMIS2Q5TEJ8 643 aa12.07□□□□□ -0.48
CDH4-202ENST00000611855 BRINP3Q76B58 766 aa12.07□□□□□ -0.48
CDH4-202ENST00000611855 ACSBG1Q96GR2 724 aa12.07□□□□□ -0.48
CDH4-202ENST00000611855 INPP4AQ96PE3 977 aaPredicted RBP12.07□□□□□ -0.48
CDH4-202ENST00000611855 SPAG5Q96R06 1193 aa12.07□□□□□ -0.48
CDH4-202ENST00000611855 BLOC1S4Q9NUP1 217 aa12.07□□□□□ -0.48
CDH4-202ENST00000611855 NUP98P52948 1817 aa12.07□□□□□ -0.48
CDH4-202ENST00000611855 KLRF2D3W0D1 207 aa12.06□□□□□ -0.48
CDH4-202ENST00000611855 DAPK3O43293 454 aa12.06□□□□□ -0.48
CDH4-202ENST00000611855 TSPY3P0CV98 308 aa12.06□□□□□ -0.48
CDH4-202ENST00000611855 TSPY8P0CW00 308 aa12.06□□□□□ -0.48
CDH4-202ENST00000611855 AMPD3Q01432 767 aa12.06□□□□□ -0.48
CDH4-202ENST00000611855 KLHL30Q0D2K2 578 aa12.06□□□□□ -0.48
CDH4-202ENST00000611855 UHMK1Q8TAS1 419 aaKnown RBP12.06□□□□□ -0.48
CDH4-202ENST00000611855 KCNV2Q8TDN2 545 aa12.06□□□□□ -0.48
CDH4-202ENST00000611855 CCDC113Q9H0I3 377 aa12.06□□□□□ -0.48
CDH4-202ENST00000611855 CPSF2Q9P2I0 782 aaKnown RBP12.06□□□□□ -0.48
CDH4-202ENST00000611855 AMACRQ9UHK6 382 aa12.06□□□□□ -0.48
CDH4-202ENST00000611855 KIF3CO14782 793 aa12.06□□□□□ -0.48
CDH4-202ENST00000611855 IRF6O14896 467 aa12.06□□□□□ -0.48
CDH4-202ENST00000611855 ORC4O43929 436 aa12.06□□□□□ -0.48
CDH4-202ENST00000611855 NOL4O94818 638 aa12.06□□□□□ -0.48
CDH4-202ENST00000611855 TDP2O95551 362 aa12.06□□□□□ -0.48
CDH4-202ENST00000611855 IFNAR2P48551 515 aa12.06□□□□□ -0.48
CDH4-202ENST00000611855 ZNF844Q08AG5 666 aa12.06□□□□□ -0.48
CDH4-202ENST00000611855 NONOQ15233 471 aaKnown RBP eCLIP12.06□□□□□ -0.48
CDH4-202ENST00000611855 LRRC55Q6ZSA7 311 aa12.06□□□□□ -0.48
CDH4-202ENST00000611855 BZW1Q7L1Q6 419 aaKnown RBP12.06□□□□□ -0.48
CDH4-202ENST00000611855 WHAMMQ8TF30 809 aa12.06□□□□□ -0.48
CDH4-202ENST00000611855 PRCCQ92733 491 aaPredicted RBP12.06□□□□□ -0.48
CDH4-202ENST00000611855 DDX12PQ92771 950 aa12.06□□□□□ -0.48
CDH4-202ENST00000611855 BARHL2Q9NY43 387 aa12.06□□□□□ -0.48
CDH4-202ENST00000611855 TRPC6Q9Y210 931 aa12.06□□□□□ -0.48
CDH4-202ENST00000611855 CD2APQ9Y5K6 639 aa12.06□□□□□ -0.48
CDH4-202ENST00000611855 NPHP3-ACAD11A0A0J9YXS1 232 aa12.06□□□□□ -0.48
CDH4-202ENST00000611855 PJA2O43164 708 aa12.06□□□□□ -0.48
CDH4-202ENST00000611855 SLC37A4O43826 429 aa12.06□□□□□ -0.48
CDH4-202ENST00000611855 TRIM37O94972 964 aa12.06□□□□□ -0.48
CDH4-202ENST00000611855 LCA5LO95447 670 aa12.06□□□□□ -0.48
CDH4-202ENST00000611855 KCNQ4P56696 695 aa12.06□□□□□ -0.48
CDH4-202ENST00000611855 BYSLQ13895 437 aaKnown RBP12.06□□□□□ -0.48
CDH4-202ENST00000611855 TRIM68Q6AZZ1 485 aa12.06□□□□□ -0.48
CDH4-202ENST00000611855 CEP120Q8N960 986 aa12.06□□□□□ -0.48
CDH4-202ENST00000611855 USP38Q8NB14 1042 aa12.06□□□□□ -0.48
CDH4-202ENST00000611855 LARP4BQ92615 738 aaKnown RBP12.06□□□□□ -0.48
CDH4-202ENST00000611855 CELF1Q92879 486 aaKnown RBP12.06□□□□□ -0.48
CDH4-202ENST00000611855 ELAC2Q9BQ52 826 aaKnown RBP12.06□□□□□ -0.48
CDH4-202ENST00000611855 TAF1DQ9H5J8 278 aaPredicted RBP12.06□□□□□ -0.48
CDH4-202ENST00000611855 GOPCQ9HD26 462 aa12.06□□□□□ -0.48
CDH4-202ENST00000611855 PANK4Q9NVE7 773 aa12.06□□□□□ -0.48
CDH4-202ENST00000611855 MGRN1O60291 552 aa12.05□□□□□ -0.48
CDH4-202ENST00000611855 VIMP08670 466 aaKnown RBP12.05□□□□□ -0.48
CDH4-202ENST00000611855 TNNC1P63316 161 aa12.05□□□□□ -0.48
CDH4-202ENST00000611855 XRCC4Q13426 336 aa12.05□□□□□ -0.48
CDH4-202ENST00000611855 RPS6KA1Q15418 735 aa12.05□□□□□ -0.48
CDH4-202ENST00000611855 DIXDC1Q155Q3 683 aa12.05□□□□□ -0.48
CDH4-202ENST00000611855 CCDC197Q8NCU1 140 aa12.05□□□□□ -0.48
CDH4-202ENST00000611855 SNX29Q8TEQ0 813 aa12.05□□□□□ -0.48
CDH4-202ENST00000611855 AGAP11Q8TF27 550 aa12.05□□□□□ -0.48
CDH4-202ENST00000611855 PNMA5Q96PV4 448 aa12.05□□□□□ -0.48
CDH4-202ENST00000611855 COL5A2P05997 1499 aaPredicted RBP12.05□□□□□ -0.48
CDH4-202ENST00000611855 MYL1P05976 194 aa12.05□□□□□ -0.48
CDH4-202ENST00000611855 FGRP09769 529 aa12.05□□□□□ -0.48
CDH4-202ENST00000611855 TNFRSF8P28908 595 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms