RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 FBXO18Q8NFZ0 1043 aa9.99□□□□□ -0.81
SMAD4-217ENST00000611848 PPTC7Q8NI37 304 aa9.99□□□□□ -0.81
SMAD4-217ENST00000611848 AFG1LQ8WV93 481 aa9.99□□□□□ -0.81
SMAD4-217ENST00000611848 FERMT2Q96AC1 680 aa9.99□□□□□ -0.81
SMAD4-217ENST00000611848 SEZ6LQ9BYH1 1024 aa9.99□□□□□ -0.81
SMAD4-217ENST00000611848 STARD7Q9NQZ5 370 aa9.99□□□□□ -0.81
SMAD4-217ENST00000611848 KCNH7Q9NS40 1196 aa9.99□□□□□ -0.81
SMAD4-217ENST00000611848 RCOR1Q9UKL0 485 aa9.99□□□□□ -0.81
SMAD4-217ENST00000611848 ALPK3Q96L96 1907 aa9.98□□□□□ -0.81
SMAD4-217ENST00000611848 ESPNB1AK53 854 aa9.98□□□□□ -0.81
SMAD4-217ENST00000611848 FAM86B1E9PN63 330 aa9.98□□□□□ -0.81
SMAD4-217ENST00000611848 MMP3P08254 477 aa9.98□□□□□ -0.81
SMAD4-217ENST00000611848 FAM86B2P0C5J1 330 aa9.98□□□□□ -0.81
SMAD4-217ENST00000611848 KCNA2P16389 499 aa9.98□□□□□ -0.81
SMAD4-217ENST00000611848 LIG1P18858 919 aa9.98□□□□□ -0.81
SMAD4-217ENST00000611848 CLCN1P35523 988 aa9.98□□□□□ -0.81
SMAD4-217ENST00000611848 DGKDQ16760 1214 aa9.98□□□□□ -0.81
SMAD4-217ENST00000611848 MOXD1Q6UVY6 613 aa9.98□□□□□ -0.81
SMAD4-217ENST00000611848 CYFIP1Q7L576 1253 aa9.98□□□□□ -0.81
SMAD4-217ENST00000611848 PLA2G4DQ86XP0 818 aa9.98□□□□□ -0.81
SMAD4-217ENST00000611848 DIS3L2Q8IYB7 885 aaKnown RBP9.98□□□□□ -0.81
SMAD4-217ENST00000611848 CYP2W1Q8TAV3 490 aa9.98□□□□□ -0.81
SMAD4-217ENST00000611848 OXER1Q8TDS5 423 aa9.98□□□□□ -0.81
SMAD4-217ENST00000611848 VTI1AQ96AJ9 217 aa9.98□□□□□ -0.81
SMAD4-217ENST00000611848 SPATA33Q96N06 139 aa9.98□□□□□ -0.81
SMAD4-217ENST00000611848 KAT6AQ92794 2004 aa9.97□□□□□ -0.81
SMAD4-217ENST00000611848 NFASCO94856 1347 aa9.97□□□□□ -0.81
SMAD4-217ENST00000611848 CYP3A7-CYP3A51PA0A087WV96 503 aa9.97□□□□□ -0.81
SMAD4-217ENST00000611848 A0A0U1RQG5 324 aaPredicted RBP9.97□□□□□ -0.81
SMAD4-217ENST00000611848 ATP9AO75110 1047 aa9.97□□□□□ -0.81
SMAD4-217ENST00000611848 PPFIA4O75335 1185 aa9.97□□□□□ -0.81
SMAD4-217ENST00000611848 MYL3P08590 195 aa9.97□□□□□ -0.81
SMAD4-217ENST00000611848 ARP10275 920 aa9.97□□□□□ -0.81
SMAD4-217ENST00000611848 HOXD8P13378 290 aaPredicted RBP9.97□□□□□ -0.81
SMAD4-217ENST00000611848 CYP3A7P24462 503 aa9.97□□□□□ -0.81
SMAD4-217ENST00000611848 FOSBP53539 338 aa9.97□□□□□ -0.81
SMAD4-217ENST00000611848 PURAQ00577 322 aaKnown RBP9.97□□□□□ -0.81
SMAD4-217ENST00000611848 SNX17Q15036 470 aa9.97□□□□□ -0.81
SMAD4-217ENST00000611848 INF2Q27J81 1249 aa9.97□□□□□ -0.81
SMAD4-217ENST00000611848 CXCL17Q6UXB2 119 aa9.97□□□□□ -0.81
SMAD4-217ENST00000611848 RBM43Q6ZSC3 357 aaKnown RBP9.97□□□□□ -0.81
SMAD4-217ENST00000611848 PIK3AP1Q6ZUJ8 805 aa9.97□□□□□ -0.81
SMAD4-217ENST00000611848 RNF214Q8ND24 703 aa9.97□□□□□ -0.81
SMAD4-217ENST00000611848 DPF3Q92784 378 aa9.97□□□□□ -0.81
SMAD4-217ENST00000611848 ZNF396Q96N95 335 aaPredicted RBP9.97□□□□□ -0.81
SMAD4-217ENST00000611848 NAP1L4Q99733 375 aaKnown RBP9.97□□□□□ -0.81
SMAD4-217ENST00000611848 MTG1Q9BT17 334 aaPredicted RBP9.97□□□□□ -0.81
SMAD4-217ENST00000611848 DDX19AQ9NUU7 478 aaKnown RBP9.97□□□□□ -0.81
SMAD4-217ENST00000611848 IGLV3-22A0A075B6J6 115 aa9.96□□□□□ -0.81
SMAD4-217ENST00000611848 BTBD18B2RXH4 712 aa9.96□□□□□ -0.81
SMAD4-217ENST00000611848 NOP56O00567 594 aaKnown RBP9.96□□□□□ -0.81
SMAD4-217ENST00000611848 EDIL3O43854 480 aa9.96□□□□□ -0.81
SMAD4-217ENST00000611848 ATN1P54259 1190 aaPredicted RBP9.96□□□□□ -0.81
SMAD4-217ENST00000611848 NR5A1Q13285 461 aa9.96□□□□□ -0.81
SMAD4-217ENST00000611848 LRRC26Q2I0M4 334 aa9.96□□□□□ -0.81
SMAD4-217ENST00000611848 HSDL1Q3SXM5 330 aa9.96□□□□□ -0.81
SMAD4-217ENST00000611848 Q4G0T1 1027 aa9.96□□□□□ -0.81
SMAD4-217ENST00000611848 NEK8Q86SG6 692 aa9.96□□□□□ -0.81
SMAD4-217ENST00000611848 TNFRSF25Q93038 417 aa9.96□□□□□ -0.81
SMAD4-217ENST00000611848 SDF4Q9BRK5 362 aa9.96□□□□□ -0.81
SMAD4-217ENST00000611848 NUP62CLQ9H1M0 184 aa9.96□□□□□ -0.81
SMAD4-217ENST00000611848 FOXP1Q9H334 677 aaPredicted RBP9.96□□□□□ -0.81
SMAD4-217ENST00000611848 AGO4Q9HCK5 861 aaKnown RBP9.96□□□□□ -0.81
SMAD4-217ENST00000611848 MROH7Q68CQ1 1323 aa9.96□□□□□ -0.82
SMAD4-217ENST00000611848 GOLGA6L4A6NEF3 574 aa9.96□□□□□ -0.82
SMAD4-217ENST00000611848 ARVCFO00192 962 aa9.96□□□□□ -0.82
SMAD4-217ENST00000611848 EVI5O60447 810 aa9.96□□□□□ -0.82
SMAD4-217ENST00000611848 SORBS3O60504 671 aa9.96□□□□□ -0.82
SMAD4-217ENST00000611848 GCFC2P16383 781 aaKnown RBP9.96□□□□□ -0.82
SMAD4-217ENST00000611848 RTP1P59025 263 aa9.96□□□□□ -0.82
SMAD4-217ENST00000611848 GUCY1B3Q02153 619 aa9.96□□□□□ -0.82
SMAD4-217ENST00000611848 ITGA7Q13683 1181 aa9.96□□□□□ -0.82
SMAD4-217ENST00000611848 LETM2Q2VYF4 491 aa9.96□□□□□ -0.82
SMAD4-217ENST00000611848 PRR16Q569H4 304 aa9.96□□□□□ -0.82
SMAD4-217ENST00000611848 PPP4R3AQ6IN85 833 aa9.96□□□□□ -0.82
SMAD4-217ENST00000611848 SLC43A3Q8NBI5 491 aa9.96□□□□□ -0.82
SMAD4-217ENST00000611848 SEPT1Q8WYJ6 367 aa9.96□□□□□ -0.82
SMAD4-217ENST00000611848 LENG9Q96B70 501 aa9.96□□□□□ -0.82
SMAD4-217ENST00000611848 MBOAT7Q96N66 472 aa9.96□□□□□ -0.82
SMAD4-217ENST00000611848 TOX2Q96NM4 488 aa9.96□□□□□ -0.82
SMAD4-217ENST00000611848 GPR20Q99678 358 aa9.96□□□□□ -0.82
SMAD4-217ENST00000611848 ZNF577Q9BSK1 485 aa9.96□□□□□ -0.82
SMAD4-217ENST00000611848 KATNAL1Q9BW62 490 aa9.96□□□□□ -0.82
SMAD4-217ENST00000611848 CLSTN2Q9H4D0 955 aa9.96□□□□□ -0.82
SMAD4-217ENST00000611848 BCAS3Q9H6U6 928 aa9.96□□□□□ -0.82
SMAD4-217ENST00000611848 JPH1Q9HDC5 661 aaPredicted RBP9.96□□□□□ -0.82
SMAD4-217ENST00000611848 TBC1D22BQ9NU19 505 aa9.96□□□□□ -0.82
SMAD4-217ENST00000611848 DACT1Q9NYF0 836 aa9.96□□□□□ -0.82
SMAD4-217ENST00000611848 PKD2L1Q9P0L9 805 aa9.96□□□□□ -0.82
SMAD4-217ENST00000611848 SLC9A2Q9UBY0 812 aa9.96□□□□□ -0.82
SMAD4-217ENST00000611848 NR2E3Q9Y5X4 410 aa9.96□□□□□ -0.82
SMAD4-217ENST00000611848 MYH9P35579 1960 aaKnown RBP9.95□□□□□ -0.82
SMAD4-217ENST00000611848 IPO5O00410 1097 aaKnown RBP9.95□□□□□ -0.82
SMAD4-217ENST00000611848 CDK7P50613 346 aa9.95□□□□□ -0.82
SMAD4-217ENST00000611848 ITGB3BPQ13352 177 aaPredicted RBP9.95□□□□□ -0.82
SMAD4-217ENST00000611848 GNL2Q13823 731 aaKnown RBP9.95□□□□□ -0.82
SMAD4-217ENST00000611848 EARS2Q5JPH6 523 aaKnown RBP9.95□□□□□ -0.82
SMAD4-217ENST00000611848 ANKRD33Q7Z3H0 272 aa9.95□□□□□ -0.82
SMAD4-217ENST00000611848 USP28Q96RU2 1077 aa9.95□□□□□ -0.82
SMAD4-217ENST00000611848 DDX25Q9UHL0 483 aaKnown RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms