RNA–Protein interactions for RNA: ENST00000611527.1

FGFR2-223, Transcript of fibroblast growth factor receptor 2, human

TSL 3 BASIC

Gene FGFR2, Length 435 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR2-223	ENST00000611527	TDP2	O95551	362 aa		12.7	□□□□□ -0.38
FGFR2-223	ENST00000611527	GGPS1	O95749	300 aa		12.7	□□□□□ -0.38
FGFR2-223	ENST00000611527	GH1	P01241	217 aa		12.7	□□□□□ -0.38
FGFR2-223	ENST00000611527	HSP90AA1	P07900	732 aa	Known RBP	12.7	□□□□□ -0.38
FGFR2-223	ENST00000611527	SET	Q01105	290 aa	Predicted RBP	12.7	□□□□□ -0.38
FGFR2-223	ENST00000611527	GNL2	Q13823	731 aa	Known RBP	12.7	□□□□□ -0.38
FGFR2-223	ENST00000611527	KCNV1	Q6PIU1	500 aa		12.7	□□□□□ -0.38
FGFR2-223	ENST00000611527	NIPA1	Q7RTP0	329 aa		12.7	□□□□□ -0.38
FGFR2-223	ENST00000611527	NEK8	Q86SG6	692 aa		12.7	□□□□□ -0.38
FGFR2-223	ENST00000611527	USP38	Q8NB14	1042 aa		12.7	□□□□□ -0.38
FGFR2-223	ENST00000611527	CDHR1	Q96JP9	859 aa		12.7	□□□□□ -0.38
FGFR2-223	ENST00000611527	TRPV6	Q9H1D0	765 aa		12.7	□□□□□ -0.38
FGFR2-223	ENST00000611527	ZNF576	Q9H609	170 aa		12.7	□□□□□ -0.38
FGFR2-223	ENST00000611527	IL23A	Q9NPF7	189 aa		12.7	□□□□□ -0.38
FGFR2-223	ENST00000611527	SPTBN5	Q9NRC6	3674 aa	Known RBP	12.69	□□□□□ -0.38
FGFR2-223	ENST00000611527	TTC28	Q96AY4	2481 aa		12.69	□□□□□ -0.38
FGFR2-223	ENST00000611527	SCN10A	Q9Y5Y9	1956 aa		12.69	□□□□□ -0.38
FGFR2-223	ENST00000611527	VPS37C	A5D8V6	355 aa	Predicted RBP	12.69	□□□□□ -0.38
FGFR2-223	ENST00000611527	MEIS1	O00470	390 aa		12.69	□□□□□ -0.38
FGFR2-223	ENST00000611527	EDIL3	O43854	480 aa		12.69	□□□□□ -0.38
FGFR2-223	ENST00000611527	B4GALT4	O60513	344 aa		12.69	□□□□□ -0.38
FGFR2-223	ENST00000611527	KCNA2	P16389	499 aa		12.69	□□□□□ -0.38
FGFR2-223	ENST00000611527	CIITA	P33076	1130 aa		12.69	□□□□□ -0.38
FGFR2-223	ENST00000611527	SP2	Q02086	613 aa		12.69	□□□□□ -0.38
FGFR2-223	ENST00000611527	LETM2	Q2VYF4	491 aa		12.69	□□□□□ -0.38
FGFR2-223	ENST00000611527	PRR16	Q569H4	304 aa		12.69	□□□□□ -0.38
FGFR2-223	ENST00000611527	LARP1B	Q659C4	914 aa	Known RBP	12.69	□□□□□ -0.38
FGFR2-223	ENST00000611527	MCTP1	Q6DN14	999 aa		12.69	□□□□□ -0.38
FGFR2-223	ENST00000611527	PLA2G4D	Q86XP0	818 aa		12.69	□□□□□ -0.38
FGFR2-223	ENST00000611527	LENG9	Q96B70	501 aa		12.69	□□□□□ -0.38
FGFR2-223	ENST00000611527	NOC4L	Q9BVI4	516 aa	Known RBP	12.69	□□□□□ -0.38
FGFR2-223	ENST00000611527	WNT8A	Q9H1J5	351 aa		12.69	□□□□□ -0.38
FGFR2-223	ENST00000611527	FOXP1	Q9H334	677 aa	Predicted RBP	12.69	□□□□□ -0.38
FGFR2-223	ENST00000611527	KCNH7	Q9NS40	1196 aa		12.69	□□□□□ -0.38
FGFR2-223	ENST00000611527	CXXC1	Q9P0U4	656 aa	Predicted RBP	12.69	□□□□□ -0.38
FGFR2-223	ENST00000611527		Q9Y3F1	56 aa		12.69	□□□□□ -0.38
FGFR2-223	ENST00000611527	SLC37A4	O43826	429 aa		12.68	□□□□□ -0.38
FGFR2-223	ENST00000611527	AR	P10275	920 aa		12.68	□□□□□ -0.38
FGFR2-223	ENST00000611527	TGFB3	P10600	412 aa		12.68	□□□□□ -0.38
FGFR2-223	ENST00000611527	PDC	P20941	246 aa		12.68	□□□□□ -0.38
FGFR2-223	ENST00000611527	CPT1A	P50416	773 aa		12.68	□□□□□ -0.38
FGFR2-223	ENST00000611527	USP11	P51784	963 aa		12.68	□□□□□ -0.38
FGFR2-223	ENST00000611527	CCL23	P55773	120 aa		12.68	□□□□□ -0.38
FGFR2-223	ENST00000611527	SP4	Q02446	784 aa		12.68	□□□□□ -0.38
FGFR2-223	ENST00000611527	BECN1	Q14457	450 aa		12.68	□□□□□ -0.38
FGFR2-223	ENST00000611527	CELF3	Q5SZQ8	465 aa	Known RBP	12.68	□□□□□ -0.38
FGFR2-223	ENST00000611527	MOXD1	Q6UVY6	613 aa		12.68	□□□□□ -0.38
FGFR2-223	ENST00000611527	METTL7B	Q6UX53	244 aa		12.68	□□□□□ -0.38
FGFR2-223	ENST00000611527	NOSTRIN	Q8IVI9	506 aa		12.68	□□□□□ -0.38
FGFR2-223	ENST00000611527	DHX37	Q8IY37	1157 aa	Known RBP	12.68	□□□□□ -0.38
FGFR2-223	ENST00000611527	SPRYD3	Q8NCJ5	442 aa		12.68	□□□□□ -0.38
FGFR2-223	ENST00000611527	AFG1L	Q8WV93	481 aa		12.68	□□□□□ -0.38
FGFR2-223	ENST00000611527	HERVK_113	Q902F9	699 aa		12.68	□□□□□ -0.38
FGFR2-223	ENST00000611527	EMID1	Q96A84	441 aa	Predicted RBP	12.68	□□□□□ -0.38
FGFR2-223	ENST00000611527	UIMC1	Q96RL1	719 aa		12.68	□□□□□ -0.38
FGFR2-223	ENST00000611527	AGO4	Q9HCK5	861 aa	Known RBP	12.68	□□□□□ -0.38
FGFR2-223	ENST00000611527	WDR81	Q562E7	1941 aa		12.68	□□□□□ -0.38
FGFR2-223	ENST00000611527	TANC1	Q9C0D5	1861 aa		12.68	□□□□□ -0.38
FGFR2-223	ENST00000611527	WNT7A	O00755	349 aa		12.67	□□□□□ -0.38
FGFR2-223	ENST00000611527	ATP9A	O75110	1047 aa		12.67	□□□□□ -0.38
FGFR2-223	ENST00000611527	MMP3	P08254	477 aa		12.67	□□□□□ -0.38
FGFR2-223	ENST00000611527	GCFC2	P16383	781 aa	Known RBP	12.67	□□□□□ -0.38
FGFR2-223	ENST00000611527	PURA	Q00577	322 aa	Known RBP	12.67	□□□□□ -0.38
FGFR2-223	ENST00000611527	ITGB3BP	Q13352	177 aa	Predicted RBP	12.67	□□□□□ -0.38
FGFR2-223	ENST00000611527	LAMC2	Q13753	1193 aa		12.67	□□□□□ -0.38
FGFR2-223	ENST00000611527	NEDD9	Q14511	834 aa		12.67	□□□□□ -0.38
FGFR2-223	ENST00000611527	MYSM1	Q5VVJ2	828 aa		12.67	□□□□□ -0.38
FGFR2-223	ENST00000611527	CYFIP1	Q7L576	1253 aa		12.67	□□□□□ -0.38
FGFR2-223	ENST00000611527	OTOP2	Q7RTS6	562 aa		12.67	□□□□□ -0.38
FGFR2-223	ENST00000611527	PPTC7	Q8NI37	304 aa		12.67	□□□□□ -0.38
FGFR2-223	ENST00000611527	SPATA33	Q96N06	139 aa		12.67	□□□□□ -0.38
FGFR2-223	ENST00000611527	MBOAT7	Q96N66	472 aa		12.67	□□□□□ -0.38
FGFR2-223	ENST00000611527	SENP7	Q9BQF6	1050 aa		12.67	□□□□□ -0.38
FGFR2-223	ENST00000611527	SEZ6L	Q9BYH1	1024 aa		12.67	□□□□□ -0.38
FGFR2-223	ENST00000611527	MTIF3	Q9H2K0	278 aa	Known RBP	12.67	□□□□□ -0.38
FGFR2-223	ENST00000611527	PRDM12	Q9H4Q4	367 aa		12.67	□□□□□ -0.38
FGFR2-223	ENST00000611527	BCAS3	Q9H6U6	928 aa		12.67	□□□□□ -0.38
FGFR2-223	ENST00000611527	MLXIP	Q9HAP2	919 aa		12.67	□□□□□ -0.38
FGFR2-223	ENST00000611527	TRMT13	Q9NUP7	481 aa	Known RBP	12.67	□□□□□ -0.38
FGFR2-223	ENST00000611527	DDX25	Q9UHL0	483 aa	Known RBP	12.67	□□□□□ -0.38
FGFR2-223	ENST00000611527	CHD7	Q9P2D1	2997 aa		12.67	□□□□□ -0.38
FGFR2-223	ENST00000611527	SCN5A	Q14524	2016 aa		12.67	□□□□□ -0.38
FGFR2-223	ENST00000611527	NFASC	O94856	1347 aa		12.66	□□□□□ -0.38
FGFR2-223	ENST00000611527	CYP3A7-CYP3A51P	A0A087WV96	503 aa		12.66	□□□□□ -0.38
FGFR2-223	ENST00000611527	DDX39A	O00148	427 aa	Known RBP	12.66	□□□□□ -0.38
FGFR2-223	ENST00000611527	IPO5	O00410	1097 aa	Known RBP	12.66	□□□□□ -0.38
FGFR2-223	ENST00000611527	NOP56	O00567	594 aa	Known RBP	12.66	□□□□□ -0.38
FGFR2-223	ENST00000611527	CCNT1	O60563	726 aa	Known RBP	12.66	□□□□□ -0.38
FGFR2-223	ENST00000611527	FGB	P02675	491 aa		12.66	□□□□□ -0.38
FGFR2-223	ENST00000611527	MYL3	P08590	195 aa		12.66	□□□□□ -0.38
FGFR2-223	ENST00000611527	CYP2C9	P11712	490 aa		12.66	□□□□□ -0.38
FGFR2-223	ENST00000611527	ATP2B1	P20020	1258 aa		12.66	□□□□□ -0.38
FGFR2-223	ENST00000611527	SYT1	P21579	422 aa		12.66	□□□□□ -0.38
FGFR2-223	ENST00000611527	CYP3A7	P24462	503 aa		12.66	□□□□□ -0.38
FGFR2-223	ENST00000611527	U2AF2	P26368	475 aa	Known RBP eCLIP	12.66	□□□□□ -0.38
FGFR2-223	ENST00000611527	RAB30	Q15771	203 aa		12.66	□□□□□ -0.38
FGFR2-223	ENST00000611527		Q4G0T1	1027 aa		12.66	□□□□□ -0.38
FGFR2-223	ENST00000611527	BRDT	Q58F21	947 aa	Predicted RBP	12.66	□□□□□ -0.38
FGFR2-223	ENST00000611527	POTED	Q86YR6	584 aa		12.66	□□□□□ -0.38
FGFR2-223	ENST00000611527	GIMAP8	Q8ND71	665 aa	Predicted RBP	12.66	□□□□□ -0.38

Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms