RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 CCDC83Q8IWF9 413 aa9.9□□□□□ -0.82
SNCA-212ENST00000611107 TMEM199Q8N511 208 aa9.9□□□□□ -0.82
SNCA-212ENST00000611107 ZNF713Q8N859 430 aaPredicted RBP9.9□□□□□ -0.82
SNCA-212ENST00000611107 HERVK_113Q902F9 699 aa9.9□□□□□ -0.82
SNCA-212ENST00000611107 GPRASP2Q96D09 838 aa9.9□□□□□ -0.82
SNCA-212ENST00000611107 ZMYND12Q9H0C1 365 aa9.9□□□□□ -0.82
SNCA-212ENST00000611107 SH2B1Q9NRF2 756 aaPredicted RBP9.9□□□□□ -0.82
SNCA-212ENST00000611107 KCNH7Q9NS40 1196 aa9.9□□□□□ -0.82
SNCA-212ENST00000611107 SETD4Q9NVD3 440 aa9.9□□□□□ -0.82
SNCA-212ENST00000611107 YBX2Q9Y2T7 364 aaKnown RBP9.9□□□□□ -0.82
SNCA-212ENST00000611107 CHD7Q9P2D1 2997 aa9.89□□□□□ -0.83
SNCA-212ENST00000611107 H3BRB1 525 aa9.89□□□□□ -0.83
SNCA-212ENST00000611107 M0R2N6 131 aa9.89□□□□□ -0.83
SNCA-212ENST00000611107 MEIS1O00470 390 aa9.89□□□□□ -0.83
SNCA-212ENST00000611107 STAM2O75886 525 aa9.89□□□□□ -0.83
SNCA-212ENST00000611107 CDKL5O76039 1030 aa9.89□□□□□ -0.83
SNCA-212ENST00000611107 DEXIO95424 95 aa9.89□□□□□ -0.83
SNCA-212ENST00000611107 CKBP12277 381 aa9.89□□□□□ -0.83
SNCA-212ENST00000611107 FDPSP14324 419 aaKnown RBP9.89□□□□□ -0.83
SNCA-212ENST00000611107 MARK3P27448 753 aa9.89□□□□□ -0.83
SNCA-212ENST00000611107 ADAM17P78536 824 aa9.89□□□□□ -0.83
SNCA-212ENST00000611107 ARHGAP4P98171 946 aa9.89□□□□□ -0.83
SNCA-212ENST00000611107 PTPN11Q06124 597 aaPredicted RBP9.89□□□□□ -0.83
SNCA-212ENST00000611107 SSRP1Q08945 709 aaKnown RBP9.89□□□□□ -0.83
SNCA-212ENST00000611107 ZNF618Q5T7W0 954 aa9.89□□□□□ -0.83
SNCA-212ENST00000611107 KCNV1Q6PIU1 500 aa9.89□□□□□ -0.83
SNCA-212ENST00000611107 RUFY4Q6ZNE9 571 aa9.89□□□□□ -0.83
SNCA-212ENST00000611107 TRIM22Q8IYM9 498 aa9.89□□□□□ -0.83
SNCA-212ENST00000611107 IL27Q8NEV9 243 aa9.89□□□□□ -0.83
SNCA-212ENST00000611107 LENG9Q96B70 501 aa9.89□□□□□ -0.83
SNCA-212ENST00000611107 TMX3Q96JJ7 454 aa9.89□□□□□ -0.83
SNCA-212ENST00000611107 SENP7Q9BQF6 1050 aa9.89□□□□□ -0.83
SNCA-212ENST00000611107 PBX4Q9BYU1 374 aa9.89□□□□□ -0.83
SNCA-212ENST00000611107 SEMA6BQ9H3T3 888 aa9.89□□□□□ -0.83
SNCA-212ENST00000611107 TUT1Q9H6E5 874 aaKnown RBP9.89□□□□□ -0.83
SNCA-212ENST00000611107 AGO4Q9HCK5 861 aaKnown RBP9.89□□□□□ -0.83
SNCA-212ENST00000611107 CHD9Q3L8U1 2897 aa9.89□□□□□ -0.83
SNCA-212ENST00000611107 ESYT2A0FGR8 921 aa9.88□□□□□ -0.83
SNCA-212ENST00000611107 FAM205CA6NFA0 338 aa9.88□□□□□ -0.83
SNCA-212ENST00000611107 SPDYE3A6NKU9 549 aa9.88□□□□□ -0.83
SNCA-212ENST00000611107 DDX39AO00148 427 aaKnown RBP9.88□□□□□ -0.83
SNCA-212ENST00000611107 FGBP02675 491 aa9.88□□□□□ -0.83
SNCA-212ENST00000611107 TCF7P36402 384 aaPredicted RBP9.88□□□□□ -0.83
SNCA-212ENST00000611107 SMAD3P84022 425 aaKnown RBP9.88□□□□□ -0.83
SNCA-212ENST00000611107 RBL2Q08999 1139 aa9.88□□□□□ -0.83
SNCA-212ENST00000611107 MTMR1Q13613 665 aa9.88□□□□□ -0.83
SNCA-212ENST00000611107 NEDD9Q14511 834 aa9.88□□□□□ -0.83
SNCA-212ENST00000611107 GNPTABQ3T906 1256 aa9.88□□□□□ -0.83
SNCA-212ENST00000611107 BRDTQ58F21 947 aaPredicted RBP9.88□□□□□ -0.83
SNCA-212ENST00000611107 EARS2Q5JPH6 523 aaKnown RBP9.88□□□□□ -0.83
SNCA-212ENST00000611107 MARCH8Q5T0T0 291 aa9.88□□□□□ -0.83
SNCA-212ENST00000611107 XRRA1Q6P2D8 792 aa9.88□□□□□ -0.83
SNCA-212ENST00000611107 CPLX2Q6PUV4 134 aaKnown RBP9.88□□□□□ -0.83
SNCA-212ENST00000611107 C7orf31Q8N865 590 aa9.88□□□□□ -0.83
SNCA-212ENST00000611107 OXER1Q8TDS5 423 aa9.88□□□□□ -0.83
SNCA-212ENST00000611107 LMBR1Q8WVP7 490 aa9.88□□□□□ -0.83
SNCA-212ENST00000611107 TRAPPC12Q8WVT3 735 aa9.88□□□□□ -0.83
SNCA-212ENST00000611107 ZSCAN31Q96LW9 406 aaPredicted RBP9.88□□□□□ -0.83
SNCA-212ENST00000611107 ORC3Q9UBD5 711 aaPredicted RBP9.88□□□□□ -0.83
SNCA-212ENST00000611107 KCNJ14Q9UNX9 436 aa9.88□□□□□ -0.83
SNCA-212ENST00000611107 LGR5O75473 907 aa9.87□□□□□ -0.83
SNCA-212ENST00000611107 SUPT20HL2P0C7V6 817 aa9.87□□□□□ -0.83
SNCA-212ENST00000611107 ATP4AP20648 1035 aa9.87□□□□□ -0.83
SNCA-212ENST00000611107 DNAJB2P25686 324 aa9.87□□□□□ -0.83
SNCA-212ENST00000611107 ACTR2P61160 394 aa9.87□□□□□ -0.83
SNCA-212ENST00000611107 DEFB103AP81534 67 aa9.87□□□□□ -0.83
SNCA-212ENST00000611107 AKAP17AQ02040 695 aaKnown RBP9.87□□□□□ -0.83
SNCA-212ENST00000611107 MKRN4PQ13434 485 aaPredicted RBP9.87□□□□□ -0.83
SNCA-212ENST00000611107 GRIN2CQ14957 1233 aa9.87□□□□□ -0.83
SNCA-212ENST00000611107 CEP55Q53EZ4 464 aa9.87□□□□□ -0.83
SNCA-212ENST00000611107 GPR153Q6NV75 609 aa9.87□□□□□ -0.83
SNCA-212ENST00000611107 NLRX1Q86UT6 975 aa9.87□□□□□ -0.83
SNCA-212ENST00000611107 SERINC5Q86VE9 423 aa9.87□□□□□ -0.83
SNCA-212ENST00000611107 CCDC148Q8NFR7 591 aa9.87□□□□□ -0.83
SNCA-212ENST00000611107 MYLIPQ8WY64 445 aa9.87□□□□□ -0.83
SNCA-212ENST00000611107 CDX2Q99626 313 aaPredicted RBP9.87□□□□□ -0.83
SNCA-212ENST00000611107 SEZ6LQ9BYH1 1024 aa9.87□□□□□ -0.83
SNCA-212ENST00000611107 NKX2-4Q9H2Z4 354 aa9.87□□□□□ -0.83
SNCA-212ENST00000611107 PRUNE2Q8WUY3 3088 aa9.87□□□□□ -0.83
SNCA-212ENST00000611107 MYO7AQ13402 2215 aa9.87□□□□□ -0.83
SNCA-212ENST00000611107 PRRC2BQ5JSZ5 2229 aaKnown RBP9.87□□□□□ -0.83
SNCA-212ENST00000611107 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.86□□□□□ -0.83
SNCA-212ENST00000611107 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.86□□□□□ -0.83
SNCA-212ENST00000611107 C17orf102A2RUQ5 167 aa9.86□□□□□ -0.83
SNCA-212ENST00000611107 EPOPA6NHQ4 379 aa9.86□□□□□ -0.83
SNCA-212ENST00000611107 PITPNM1O00562 1244 aa9.86□□□□□ -0.83
SNCA-212ENST00000611107 NOP56O00567 594 aaKnown RBP9.86□□□□□ -0.83
SNCA-212ENST00000611107 WNT7AO00755 349 aa9.86□□□□□ -0.83
SNCA-212ENST00000611107 ATG7O95352 703 aa9.86□□□□□ -0.83
SNCA-212ENST00000611107 TDP2O95551 362 aa9.86□□□□□ -0.83
SNCA-212ENST00000611107 CXCL10P02778 98 aa9.86□□□□□ -0.83
SNCA-212ENST00000611107 CYP3A4P08684 503 aa9.86□□□□□ -0.83
SNCA-212ENST00000611107 CTSHP09668 335 aa9.86□□□□□ -0.83
SNCA-212ENST00000611107 SELPP16109 830 aa9.86□□□□□ -0.83
SNCA-212ENST00000611107 MCM2P49736 904 aa9.86□□□□□ -0.83
SNCA-212ENST00000611107 FOSBP53539 338 aa9.86□□□□□ -0.83
SNCA-212ENST00000611107 PTK7Q13308 1070 aa9.86□□□□□ -0.83
SNCA-212ENST00000611107 AP3B2Q13367 1082 aa9.86□□□□□ -0.83
SNCA-212ENST00000611107 PSRC1Q6PGN9 363 aaPredicted RBP9.86□□□□□ -0.83
SNCA-212ENST00000611107 LRRC8DQ7L1W4 858 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms