RNA–Protein interactions for RNA: ENST00000610970.1

HOXA4-204, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-204ENST00000610970 DEFB129Q9H1M3 183 aa26.31■■□□□ 1.8
HOXA4-204ENST00000610970 TRAF3IP3Q9Y228 551 aa26.31■■□□□ 1.8
HOXA4-204ENST00000610970 CETN3O15182 167 aa26.31■■□□□ 1.8
HOXA4-204ENST00000610970 USO1O60763 962 aaKnown RBP26.31■■□□□ 1.8
HOXA4-204ENST00000610970 CAP2P40123 477 aa26.31■■□□□ 1.8
HOXA4-204ENST00000610970 BRD3Q15059 726 aa26.31■■□□□ 1.8
HOXA4-204ENST00000610970 TRIM59Q8IWR1 403 aa26.31■■□□□ 1.8
HOXA4-204ENST00000610970 PURBQ96QR8 312 aaKnown RBP26.31■■□□□ 1.8
HOXA4-204ENST00000610970 ATAD5Q96QE3 1844 aa26.3■■□□□ 1.8
HOXA4-204ENST00000610970 ANO9A1A5B4 782 aa26.3■■□□□ 1.8
HOXA4-204ENST00000610970 GAP43P17677 238 aa26.3■■□□□ 1.8
HOXA4-204ENST00000610970 KIF5AQ12840 1032 aa26.3■■□□□ 1.8
HOXA4-204ENST00000610970 EPM2AIP1Q7L775 607 aaPredicted RBP26.3■■□□□ 1.8
HOXA4-204ENST00000610970 ZBED3Q96IU2 234 aaPredicted RBP26.3■■□□□ 1.8
HOXA4-204ENST00000610970 EIF2AK1Q9BQI3 630 aaKnown RBP26.3■■□□□ 1.8
HOXA4-204ENST00000610970 TANGO6Q9C0B7 1094 aa26.3■■□□□ 1.8
HOXA4-204ENST00000610970 MTFR1LQ9H019 292 aa26.3■■□□□ 1.8
HOXA4-204ENST00000610970 ZNF277Q9NRM2 450 aaPredicted RBP26.3■■□□□ 1.8
HOXA4-204ENST00000610970 FAM207AQ9NSI2 230 aaPredicted RBP26.3■■□□□ 1.8
HOXA4-204ENST00000610970 CEP72Q9P209 647 aa26.3■■□□□ 1.8
HOXA4-204ENST00000610970 NPHP3-ACAD11A0A0J9YXS1 232 aa26.29■■□□□ 1.8
HOXA4-204ENST00000610970 SSU72P8A0A1W2PR75 194 aa26.29■■□□□ 1.8
HOXA4-204ENST00000610970 CTAGE15A4D2H0 777 aa26.29■■□□□ 1.8
HOXA4-204ENST00000610970 NKRFO15226 690 aaKnown RBP eCLIP26.29■■□□□ 1.8
HOXA4-204ENST00000610970 CTAGE8P0CG41 777 aa26.29■■□□□ 1.8
HOXA4-204ENST00000610970 KCNA3P22001 575 aa26.29■■□□□ 1.8
HOXA4-204ENST00000610970 PPP2R5CQ13362 524 aa26.29■■□□□ 1.8
HOXA4-204ENST00000610970 KIAA1755Q5JYT7 1200 aa26.29■■□□□ 1.8
HOXA4-204ENST00000610970 PAPD7Q5XG87 772 aaKnown RBP26.29■■□□□ 1.8
HOXA4-204ENST00000610970 PDXDC1Q6P996 788 aa26.29■■□□□ 1.8
HOXA4-204ENST00000610970 TRAPPC11Q7Z392 1133 aa26.29■■□□□ 1.8
HOXA4-204ENST00000610970 CTAGE6Q86UF2 777 aa26.29■■□□□ 1.8
HOXA4-204ENST00000610970 CTAGE4Q8IX94 777 aa26.29■■□□□ 1.8
HOXA4-204ENST00000610970 BAP1Q92560 729 aa26.29■■□□□ 1.8
HOXA4-204ENST00000610970 PARD6BQ9BYG5 372 aa26.29■■□□□ 1.8
HOXA4-204ENST00000610970 TBC1D7Q9P0N9 293 aa26.29■■□□□ 1.8
HOXA4-204ENST00000610970 UTP18Q9Y5J1 556 aaKnown RBP eCLIP26.29■■□□□ 1.8
HOXA4-204ENST00000610970 ASNSP08243 561 aa26.28■■□□□ 1.8
HOXA4-204ENST00000610970 PABPC4Q13310 644 aaKnown RBP eCLIP26.28■■□□□ 1.8
HOXA4-204ENST00000610970 MAPK8IP2Q13387 824 aaPredicted RBP26.28■■□□□ 1.8
HOXA4-204ENST00000610970 ADAM9Q13443 819 aa26.28■■□□□ 1.8
HOXA4-204ENST00000610970 BMT2Q1RMZ1 405 aa26.28■■□□□ 1.8
HOXA4-204ENST00000610970 CACNA2D4Q7Z3S7 1137 aa26.28■■□□□ 1.8
HOXA4-204ENST00000610970 MSANTD4Q8NCY6 345 aa26.28■■□□□ 1.8
HOXA4-204ENST00000610970 SLC5A5Q92911 643 aa26.28■■□□□ 1.8
HOXA4-204ENST00000610970 VEZTQ9HBM0 779 aa26.28■■□□□ 1.8
HOXA4-204ENST00000610970 GINM1Q9NU53 330 aa26.28■■□□□ 1.8
HOXA4-204ENST00000610970 CCDC151A5D8V7 595 aa26.28■■□□□ 1.8
HOXA4-204ENST00000610970 PDXKO00764 312 aa26.28■■□□□ 1.8
HOXA4-204ENST00000610970 CALUO43852 315 aaPredicted RBP26.28■■□□□ 1.8
HOXA4-204ENST00000610970 CFBP00751 764 aa26.28■■□□□ 1.8
HOXA4-204ENST00000610970 DPEP1P16444 411 aa26.28■■□□□ 1.8
HOXA4-204ENST00000610970 KCNMA1Q12791 1236 aa26.28■■□□□ 1.8
HOXA4-204ENST00000610970 KNOP1Q1ED39 458 aaKnown RBP26.28■■□□□ 1.8
HOXA4-204ENST00000610970 FRMD5Q7Z6J6 570 aa26.28■■□□□ 1.8
HOXA4-204ENST00000610970 NELFCDQ8IXH7 590 aa26.28■■□□□ 1.8
HOXA4-204ENST00000610970 REEP2Q9BRK0 252 aa26.28■■□□□ 1.8
HOXA4-204ENST00000610970 PSMD10O75832 226 aa26.27■■□□□ 1.8
HOXA4-204ENST00000610970 PSMC6P62333 389 aa26.27■■□□□ 1.8
HOXA4-204ENST00000610970 SETQ01105 290 aaPredicted RBP26.27■■□□□ 1.8
HOXA4-204ENST00000610970 RRAGAQ7L523 313 aa26.27■■□□□ 1.8
HOXA4-204ENST00000610970 OTOP1Q7RTM1 612 aa26.27■■□□□ 1.8
HOXA4-204ENST00000610970 RPGRIP1Q96KN7 1286 aa26.27■■□□□ 1.8
HOXA4-204ENST00000610970 HSD17B14Q9BPX1 270 aa26.27■■□□□ 1.8
HOXA4-204ENST00000610970 FGFBP2Q9BYJ0 223 aa26.27■■□□□ 1.8
HOXA4-204ENST00000610970 ARHGAP20Q9P2F6 1191 aa26.27■■□□□ 1.8
HOXA4-204ENST00000610970 FHOD1Q9Y613 1164 aa26.27■■□□□ 1.8
HOXA4-204ENST00000610970 COL4A5P29400 1685 aa26.26■■□□□ 1.79
HOXA4-204ENST00000610970 PTGER2P43116 358 aa26.26■■□□□ 1.79
HOXA4-204ENST00000610970 GABPB1Q06547 395 aaPredicted RBP26.26■■□□□ 1.79
HOXA4-204ENST00000610970 CC2D1AQ6P1N0 951 aaPredicted RBP26.26■■□□□ 1.79
HOXA4-204ENST00000610970 UIMC1Q96RL1 719 aa26.26■■□□□ 1.79
HOXA4-204ENST00000610970 WDR11Q9BZH6 1224 aa26.26■■□□□ 1.79
HOXA4-204ENST00000610970 DEF6Q9H4E7 631 aa26.26■■□□□ 1.79
HOXA4-204ENST00000610970 ZHX3Q9H4I2 956 aa26.26■■□□□ 1.79
HOXA4-204ENST00000610970 ARFGAP3Q9NP61 516 aa26.26■■□□□ 1.79
HOXA4-204ENST00000610970 TRIM10Q9UDY6 481 aa26.26■■□□□ 1.79
HOXA4-204ENST00000610970 PGAP2Q9UHJ9 254 aa26.26■■□□□ 1.79
HOXA4-204ENST00000610970 PUF60Q9UHX1 559 aaKnown RBP26.26■■□□□ 1.79
HOXA4-204ENST00000610970 ZBTB12Q9Y330 459 aaPredicted RBP26.26■■□□□ 1.79
HOXA4-204ENST00000610970 LRRC53A6NM62 1247 aa26.25■■□□□ 1.79
HOXA4-204ENST00000610970 EPHB6O15197 1021 aa26.25■■□□□ 1.79
HOXA4-204ENST00000610970 TBCAO75347 108 aaKnown RBP26.25■■□□□ 1.79
HOXA4-204ENST00000610970 PNMA6AP0CW24 399 aaPredicted RBP26.25■■□□□ 1.79
HOXA4-204ENST00000610970 KIF11P52732 1056 aa26.25■■□□□ 1.79
HOXA4-204ENST00000610970 LRCH2Q5VUJ6 765 aa26.25■■□□□ 1.79
HOXA4-204ENST00000610970 CCDC174Q6PII3 467 aa26.25■■□□□ 1.79
HOXA4-204ENST00000610970 HNRNPLLQ8WVV9 542 aaKnown RBP26.25■■□□□ 1.79
HOXA4-204ENST00000610970 OLFML3Q9NRN5 406 aa26.25■■□□□ 1.79
HOXA4-204ENST00000610970 RAB21Q9UL25 225 aa26.25■■□□□ 1.79
HOXA4-204ENST00000610970 PCDHA13Q9Y5I0 950 aa26.25■■□□□ 1.79
HOXA4-204ENST00000610970 SAR1BQ9Y6B6 198 aa26.25■■□□□ 1.79
HOXA4-204ENST00000610970 MEIS1O00470 390 aa26.25■■□□□ 1.79
HOXA4-204ENST00000610970 ZSCAN20P17040 1043 aaPredicted RBP26.25■■□□□ 1.79
HOXA4-204ENST00000610970 RPL13P26373 211 aaKnown RBP26.25■■□□□ 1.79
HOXA4-204ENST00000610970 PRELPP51888 382 aa26.25■■□□□ 1.79
HOXA4-204ENST00000610970 CACNB1Q02641 598 aaPredicted RBP26.25■■□□□ 1.79
HOXA4-204ENST00000610970 CKAP4Q07065 602 aaKnown RBP26.25■■□□□ 1.79
HOXA4-204ENST00000610970 KRT26Q7Z3Y9 468 aa26.25■■□□□ 1.79
HOXA4-204ENST00000610970 SFR1Q86XK3 245 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms