RNA–Protein interactions for RNA: ENST00000610454.4

SENP3-209, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-209ENST00000610454 SMARCAD1Q9H4L7 1026 aa15.23■□□□□ 0.03
SENP3-209ENST00000610454 AGO4Q9HCK5 861 aaKnown RBP15.23■□□□□ 0.03
SENP3-209ENST00000610454 ERAP1Q9NZ08 941 aa15.23■□□□□ 0.03
SENP3-209ENST00000610454 ZBBXA8MT70 800 aa15.22■□□□□ 0.03
SENP3-209ENST00000610454 PARNO95453 639 aaKnown RBP15.22■□□□□ 0.03
SENP3-209ENST00000610454 ARP10275 920 aa15.22■□□□□ 0.03
SENP3-209ENST00000610454 SMAD3P84022 425 aaKnown RBP15.22■□□□□ 0.03
SENP3-209ENST00000610454 LRRC8DQ7L1W4 858 aa15.22■□□□□ 0.03
SENP3-209ENST00000610454 OTOP2Q7RTS6 562 aa15.22■□□□□ 0.03
SENP3-209ENST00000610454 BLIDQ8IZY5 108 aa15.22■□□□□ 0.03
SENP3-209ENST00000610454 DEFB123Q8N688 67 aa15.22■□□□□ 0.03
SENP3-209ENST00000610454 TNPO1Q92973 898 aaKnown RBP15.22■□□□□ 0.03
SENP3-209ENST00000610454 ZNF577Q9BSK1 485 aa15.22■□□□□ 0.03
SENP3-209ENST00000610454 ORC3Q9UBD5 711 aaPredicted RBP15.22■□□□□ 0.03
SENP3-209ENST00000610454 SCN5AQ14524 2016 aa15.22■□□□□ 0.03
SENP3-209ENST00000610454 EMSYQ7Z589 1322 aa15.21■□□□□ 0.03
SENP3-209ENST00000610454 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.21■□□□□ 0.03
SENP3-209ENST00000610454 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.21■□□□□ 0.03
SENP3-209ENST00000610454 FAM86B1E9PN63 330 aa15.21■□□□□ 0.03
SENP3-209ENST00000610454 DDX39AO00148 427 aaKnown RBP15.21■□□□□ 0.03
SENP3-209ENST00000610454 IPO5O00410 1097 aaKnown RBP15.21■□□□□ 0.03
SENP3-209ENST00000610454 FAM86B2P0C5J1 330 aa15.21■□□□□ 0.03
SENP3-209ENST00000610454 IQCF3P0C7M6 154 aa15.21■□□□□ 0.03
SENP3-209ENST00000610454 SELPP16109 830 aa15.21■□□□□ 0.03
SENP3-209ENST00000610454 MARK3P27448 753 aa15.21■□□□□ 0.03
SENP3-209ENST00000610454 ACTR2P61160 394 aa15.21■□□□□ 0.03
SENP3-209ENST00000610454 ME3Q16798 604 aa15.21■□□□□ 0.03
SENP3-209ENST00000610454 PRR16Q569H4 304 aa15.21■□□□□ 0.03
SENP3-209ENST00000610454 ZNF697Q5TEC3 545 aa15.21■□□□□ 0.03
SENP3-209ENST00000610454 C16orf59Q7L2K0 433 aa15.21■□□□□ 0.03
SENP3-209ENST00000610454 NECAB1Q8N987 351 aa15.21■□□□□ 0.03
SENP3-209ENST00000610454 HERVK_113Q902F9 699 aa15.21■□□□□ 0.03
SENP3-209ENST00000610454 GTF3C6Q969F1 213 aa15.21■□□□□ 0.03
SENP3-209ENST00000610454 AIFM3Q96NN9 605 aa15.21■□□□□ 0.03
SENP3-209ENST00000610454 NRCAMQ92823 1304 aa15.2■□□□□ 0.02
SENP3-209ENST00000610454 GSTTP1A0A1W2PQM5 241 aa15.2■□□□□ 0.02
SENP3-209ENST00000610454 BACH1O14867 736 aa15.2■□□□□ 0.02
SENP3-209ENST00000610454 ADAMTS3O15072 1205 aa15.2■□□□□ 0.02
SENP3-209ENST00000610454 CKBP12277 381 aa15.2■□□□□ 0.02
SENP3-209ENST00000610454 THPOP40225 353 aa15.2■□□□□ 0.02
SENP3-209ENST00000610454 USP11P51784 963 aa15.2■□□□□ 0.02
SENP3-209ENST00000610454 ZNF200P98182 395 aaPredicted RBP15.2■□□□□ 0.02
SENP3-209ENST00000610454 PPFIA1Q13136 1202 aa15.2■□□□□ 0.02
SENP3-209ENST00000610454 ITGB3BPQ13352 177 aaPredicted RBP15.2■□□□□ 0.02
SENP3-209ENST00000610454 KRT25Q7Z3Z0 450 aa15.2■□□□□ 0.02
SENP3-209ENST00000610454 SERINC5Q86VE9 423 aa15.2■□□□□ 0.02
SENP3-209ENST00000610454 DAGLBQ8NCG7 672 aa15.2■□□□□ 0.02
SENP3-209ENST00000610454 CRYGNQ8WXF5 182 aa15.2■□□□□ 0.02
SENP3-209ENST00000610454 RNPEPQ9H4A4 650 aa15.2■□□□□ 0.02
SENP3-209ENST00000610454 BRMS1Q9HCU9 246 aa15.2■□□□□ 0.02
SENP3-209ENST00000610454 TBC1D22BQ9NU19 505 aa15.2■□□□□ 0.02
SENP3-209ENST00000610454 SETD4Q9NVD3 440 aa15.2■□□□□ 0.02
SENP3-209ENST00000610454 LIMCH1Q9UPQ0 1083 aa15.2■□□□□ 0.02
SENP3-209ENST00000610454 TRPC6Q9Y210 931 aa15.2■□□□□ 0.02
SENP3-209ENST00000610454 TELO2Q9Y4R8 837 aa15.2■□□□□ 0.02
SENP3-209ENST00000610454 IGLV3-22A0A075B6J6 115 aa15.19■□□□□ 0.02
SENP3-209ENST00000610454 CCDC194A0A1B0GVG4 234 aa15.19■□□□□ 0.02
SENP3-209ENST00000610454 CIITAP33076 1130 aa15.19■□□□□ 0.02
SENP3-209ENST00000610454 RBL2Q08999 1139 aa15.19■□□□□ 0.02
SENP3-209ENST00000610454 TRIM29Q14134 588 aa15.19■□□□□ 0.02
SENP3-209ENST00000610454 NONOQ15233 471 aaKnown RBP eCLIP15.19■□□□□ 0.02
SENP3-209ENST00000610454 FAM160B1Q5W0V3 765 aa15.19■□□□□ 0.02
SENP3-209ENST00000610454 MIS18BP1Q6P0N0 1132 aa15.19■□□□□ 0.02
SENP3-209ENST00000610454 TBCKQ8TEA7 893 aa15.19■□□□□ 0.02
SENP3-209ENST00000610454 LMBR1Q8WVP7 490 aa15.19■□□□□ 0.02
SENP3-209ENST00000610454 DHX38Q92620 1227 aaKnown RBP15.19■□□□□ 0.02
SENP3-209ENST00000610454 CTAGE1Q96RT6 745 aa15.19■□□□□ 0.02
SENP3-209ENST00000610454 KCNJ14Q9UNX9 436 aa15.19■□□□□ 0.02
SENP3-209ENST00000610454 SLC4A7Q9Y6M7 1214 aa15.19■□□□□ 0.02
SENP3-209ENST00000610454 TREHO43280 583 aa15.18■□□□□ 0.02
SENP3-209ENST00000610454 CAND2O75155 1236 aa15.18■□□□□ 0.02
SENP3-209ENST00000610454 LGR5O75473 907 aa15.18■□□□□ 0.02
SENP3-209ENST00000610454 LARGE1O95461 756 aa15.18■□□□□ 0.02
SENP3-209ENST00000610454 SLC26A2P50443 739 aa15.18■□□□□ 0.02
SENP3-209ENST00000610454 STAT5BP51692 787 aa15.18■□□□□ 0.02
SENP3-209ENST00000610454 KRT76Q01546 638 aa15.18■□□□□ 0.02
SENP3-209ENST00000610454 FAM109BQ6ICB4 259 aaPredicted RBP15.18■□□□□ 0.02
SENP3-209ENST00000610454 Q7L0L9 218 aa15.18■□□□□ 0.02
SENP3-209ENST00000610454 RSPH3Q86UC2 560 aa15.18■□□□□ 0.02
SENP3-209ENST00000610454 UIMC1Q96RL1 719 aa15.18■□□□□ 0.02
SENP3-209ENST00000610454 PHF20Q9BVI0 1012 aa15.18■□□□□ 0.02
SENP3-209ENST00000610454 SAMM50Q9Y512 469 aa15.18■□□□□ 0.02
SENP3-209ENST00000610454 RSPH10B2B2RC85 870 aa15.17■□□□□ 0.02
SENP3-209ENST00000610454 CTDNEP1O95476 244 aa15.17■□□□□ 0.02
SENP3-209ENST00000610454 RSPH10BP0C881 870 aa15.17■□□□□ 0.02
SENP3-209ENST00000610454 DNAJB2P25686 324 aa15.17■□□□□ 0.02
SENP3-209ENST00000610454 HOXC8P31273 242 aa15.17■□□□□ 0.02
SENP3-209ENST00000610454 KCNJ6P48051 423 aa15.17■□□□□ 0.02
SENP3-209ENST00000610454 IGBP1P78318 339 aa15.17■□□□□ 0.02
SENP3-209ENST00000610454 RAB30Q15771 203 aa15.17■□□□□ 0.02
SENP3-209ENST00000610454 GRIK4Q16099 956 aa15.17■□□□□ 0.02
SENP3-209ENST00000610454 ZNF618Q5T7W0 954 aa15.17■□□□□ 0.02
SENP3-209ENST00000610454 RASIP1Q5U651 963 aa15.17■□□□□ 0.02
SENP3-209ENST00000610454 ZNF746Q6NUN9 644 aaPredicted RBP15.17■□□□□ 0.02
SENP3-209ENST00000610454 TAF2Q6P1X5 1199 aa15.17■□□□□ 0.02
SENP3-209ENST00000610454 PLPPR4Q7Z2D5 763 aa15.17■□□□□ 0.02
SENP3-209ENST00000610454 CKAP2LQ8IYA6 745 aa15.17■□□□□ 0.02
SENP3-209ENST00000610454 SMAP1Q8IYB5 467 aaPredicted RBP15.17■□□□□ 0.02
SENP3-209ENST00000610454 ZSCAN31Q96LW9 406 aaPredicted RBP15.17■□□□□ 0.02
SENP3-209ENST00000610454 FAM161BQ96MY7 647 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms