RNA–Protein interactions for RNA: ENST00000609081.1

LMBR1-220, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-220ENST00000609081 ATP6V0A1Q93050 837 aa17.21■□□□□ 0.35
LMBR1-220ENST00000609081 SEMA6BQ9H3T3 888 aa17.21■□□□□ 0.35
LMBR1-220ENST00000609081 SMARCAD1Q9H4L7 1026 aa17.21■□□□□ 0.35
LMBR1-220ENST00000609081 NCOA5Q9HCD5 579 aaKnown RBP17.21■□□□□ 0.35
LMBR1-220ENST00000609081 SLC9A2Q9UBY0 812 aa17.21■□□□□ 0.35
LMBR1-220ENST00000609081 RPLP2P05387 115 aaKnown RBP17.2■□□□□ 0.34
LMBR1-220ENST00000609081 SP4Q02446 784 aa17.2■□□□□ 0.34
LMBR1-220ENST00000609081 TRIM71Q2Q1W2 868 aaKnown RBP17.2■□□□□ 0.34
LMBR1-220ENST00000609081 UTP14CQ5TAP6 766 aaKnown RBP17.2■□□□□ 0.34
LMBR1-220ENST00000609081 JAKMIP3Q5VZ66 844 aa17.2■□□□□ 0.34
LMBR1-220ENST00000609081 GALNT17Q6IS24 598 aa17.2■□□□□ 0.34
LMBR1-220ENST00000609081 DEFB128Q7Z7B8 93 aa17.2■□□□□ 0.34
LMBR1-220ENST00000609081 PHOSPHO2Q8TCD6 241 aa17.2■□□□□ 0.34
LMBR1-220ENST00000609081 TIFAQ96CG3 184 aa17.2■□□□□ 0.34
LMBR1-220ENST00000609081 VWCEQ96DN2 955 aa17.2■□□□□ 0.34
LMBR1-220ENST00000609081 FTOQ9C0B1 505 aaKnown RBP eCLIP17.2■□□□□ 0.34
LMBR1-220ENST00000609081 RNPEPQ9H4A4 650 aa17.2■□□□□ 0.34
LMBR1-220ENST00000609081 AZI2Q9H6S1 392 aa17.2■□□□□ 0.34
LMBR1-220ENST00000609081 TMEM260Q9NX78 707 aa17.2■□□□□ 0.34
LMBR1-220ENST00000609081 CXXC1Q9P0U4 656 aaPredicted RBP17.2■□□□□ 0.34
LMBR1-220ENST00000609081 MSRAQ9UJ68 235 aa17.2■□□□□ 0.34
LMBR1-220ENST00000609081 TET1Q8NFU7 2136 aa17.2■□□□□ 0.34
LMBR1-220ENST00000609081 GSTTP1A0A1W2PQM5 241 aa17.19■□□□□ 0.34
LMBR1-220ENST00000609081 ZBBXA8MT70 800 aa17.19■□□□□ 0.34
LMBR1-220ENST00000609081 EFCAB14O75071 495 aa17.19■□□□□ 0.34
LMBR1-220ENST00000609081 CXCL10P02778 98 aa17.19■□□□□ 0.34
LMBR1-220ENST00000609081 SLC26A2P50443 739 aa17.19■□□□□ 0.34
LMBR1-220ENST00000609081 GLG1Q92896 1179 aa17.19■□□□□ 0.34
LMBR1-220ENST00000609081 PGBD1Q96JS3 809 aa17.19■□□□□ 0.34
LMBR1-220ENST00000609081 SLC9A7Q96T83 725 aa17.19■□□□□ 0.34
LMBR1-220ENST00000609081 SLKQ9H2G2 1235 aaPredicted RBP17.19■□□□□ 0.34
LMBR1-220ENST00000609081 AGO4Q9HCK5 861 aaKnown RBP17.19■□□□□ 0.34
LMBR1-220ENST00000609081 LGR5O75473 907 aa17.18■□□□□ 0.34
LMBR1-220ENST00000609081 ATP2A2P16615 1042 aaKnown RBP17.18■□□□□ 0.34
LMBR1-220ENST00000609081 XBP1P17861 261 aa17.18■□□□□ 0.34
LMBR1-220ENST00000609081 CIITAP33076 1130 aa17.18■□□□□ 0.34
LMBR1-220ENST00000609081 NLRP5P59047 1200 aa17.18■□□□□ 0.34
LMBR1-220ENST00000609081 TAF2Q6P1X5 1199 aa17.18■□□□□ 0.34
LMBR1-220ENST00000609081 CNKSR3Q6P9H4 555 aa17.18■□□□□ 0.34
LMBR1-220ENST00000609081 PLA2G4DQ86XP0 818 aa17.18■□□□□ 0.34
LMBR1-220ENST00000609081 TRIM50Q86XT4 487 aa17.18■□□□□ 0.34
LMBR1-220ENST00000609081 CYP2W1Q8TAV3 490 aa17.18■□□□□ 0.34
LMBR1-220ENST00000609081 GUCD1Q96NT3 240 aa17.18■□□□□ 0.34
LMBR1-220ENST00000609081 PBX4Q9BYU1 374 aa17.18■□□□□ 0.34
LMBR1-220ENST00000609081 TBC1D22BQ9NU19 505 aa17.18■□□□□ 0.34
LMBR1-220ENST00000609081 VPS54Q9P1Q0 977 aa17.18■□□□□ 0.34
LMBR1-220ENST00000609081 STK36Q9NRP7 1315 aa17.18■□□□□ 0.34
LMBR1-220ENST00000609081 IGLV3-22A0A075B6J6 115 aa17.17■□□□□ 0.34
LMBR1-220ENST00000609081 ABHD14A-ACY1A0A1B0GW23 586 aa17.17■□□□□ 0.34
LMBR1-220ENST00000609081 RRN3P2A6NIE6 340 aa17.17■□□□□ 0.34
LMBR1-220ENST00000609081 PFKFB2O60825 505 aa17.17■□□□□ 0.34
LMBR1-220ENST00000609081 ATG7O95352 703 aa17.17■□□□□ 0.34
LMBR1-220ENST00000609081 ARP10275 920 aa17.17■□□□□ 0.34
LMBR1-220ENST00000609081 USP11P51784 963 aa17.17■□□□□ 0.34
LMBR1-220ENST00000609081 ACTR2P61160 394 aa17.17■□□□□ 0.34
LMBR1-220ENST00000609081 ADAM17P78536 824 aa17.17■□□□□ 0.34
LMBR1-220ENST00000609081 ZNF200P98182 395 aaPredicted RBP17.17■□□□□ 0.34
LMBR1-220ENST00000609081 MYO9BQ13459 2157 aa17.17■□□□□ 0.34
LMBR1-220ENST00000609081 ZNF618Q5T7W0 954 aa17.17■□□□□ 0.34
LMBR1-220ENST00000609081 PLPPR4Q7Z2D5 763 aa17.17■□□□□ 0.34
LMBR1-220ENST00000609081 RPAINQ86UA6 219 aa17.17■□□□□ 0.34
LMBR1-220ENST00000609081 DAGLBQ8NCG7 672 aa17.17■□□□□ 0.34
LMBR1-220ENST00000609081 LMBR1Q8WVP7 490 aa17.17■□□□□ 0.34
LMBR1-220ENST00000609081 TTYH1Q9H313 450 aaPredicted RBP17.17■□□□□ 0.34
LMBR1-220ENST00000609081 ZNF576Q9H609 170 aa17.17■□□□□ 0.34
LMBR1-220ENST00000609081 SETD4Q9NVD3 440 aa17.17■□□□□ 0.34
LMBR1-220ENST00000609081 PKD2L1Q9P0L9 805 aa17.17■□□□□ 0.34
LMBR1-220ENST00000609081 TCEAL9Q9UHQ7 104 aa17.17■□□□□ 0.34
LMBR1-220ENST00000609081 PCDHA4Q9UN74 947 aa17.17■□□□□ 0.34
LMBR1-220ENST00000609081 PCDHA11Q9Y5I1 949 aa17.17■□□□□ 0.34
LMBR1-220ENST00000609081 GBF1Q92538 1859 aa17.16■□□□□ 0.34
LMBR1-220ENST00000609081 RSPH10B2B2RC85 870 aa17.16■□□□□ 0.34
LMBR1-220ENST00000609081 FAM86B1E9PN63 330 aa17.16■□□□□ 0.34
LMBR1-220ENST00000609081 IPO5O00410 1097 aaKnown RBP17.16■□□□□ 0.34
LMBR1-220ENST00000609081 TREHO43280 583 aa17.16■□□□□ 0.34
LMBR1-220ENST00000609081 FAM86B2P0C5J1 330 aa17.16■□□□□ 0.34
LMBR1-220ENST00000609081 RSPH10BP0C881 870 aa17.16■□□□□ 0.34
LMBR1-220ENST00000609081 THPOP40225 353 aa17.16■□□□□ 0.34
LMBR1-220ENST00000609081 KCNJ6P48051 423 aa17.16■□□□□ 0.34
LMBR1-220ENST00000609081 PPFIA1Q13136 1202 aa17.16■□□□□ 0.34
LMBR1-220ENST00000609081 STK3Q13188 491 aa17.16■□□□□ 0.34
LMBR1-220ENST00000609081 HIC1Q14526 733 aa17.16■□□□□ 0.34
LMBR1-220ENST00000609081 TRAF7Q6Q0C0 670 aa17.16■□□□□ 0.34
LMBR1-220ENST00000609081 RSPH3Q86UC2 560 aa17.16■□□□□ 0.34
LMBR1-220ENST00000609081 WASF1Q92558 559 aa17.16■□□□□ 0.34
LMBR1-220ENST00000609081 FAM161BQ96MY7 647 aa17.16■□□□□ 0.34
LMBR1-220ENST00000609081 CDX2Q99626 313 aaPredicted RBP17.16■□□□□ 0.34
LMBR1-220ENST00000609081 SLC28A3Q9HAS3 691 aa17.16■□□□□ 0.34
LMBR1-220ENST00000609081 CDH23Q9H251 3354 aa17.15■□□□□ 0.34
LMBR1-220ENST00000609081 GRXCR1A8MXD5 290 aa17.15■□□□□ 0.34
LMBR1-220ENST00000609081 KIF28PB7ZC32 967 aa17.15■□□□□ 0.34
LMBR1-220ENST00000609081 NBNO60934 754 aa17.15■□□□□ 0.34
LMBR1-220ENST00000609081 STAT5BP51692 787 aa17.15■□□□□ 0.34
LMBR1-220ENST00000609081 SCRN1Q12765 414 aa17.15■□□□□ 0.34
LMBR1-220ENST00000609081 ITGB3BPQ13352 177 aaPredicted RBP17.15■□□□□ 0.34
LMBR1-220ENST00000609081 IKBKEQ14164 716 aa17.15■□□□□ 0.34
LMBR1-220ENST00000609081 FAM160B1Q5W0V3 765 aa17.15■□□□□ 0.34
LMBR1-220ENST00000609081 ZNF577Q9BSK1 485 aa17.15■□□□□ 0.34
LMBR1-220ENST00000609081 TPCN1Q9ULQ1 816 aa17.15■□□□□ 0.34
LMBR1-220ENST00000609081 TELO2Q9Y4R8 837 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms