RNA–Protein interactions for RNA: ENST00000607814.5

CTSA-218, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-218ENST00000607814 RGS20O76081 388 aa15.66■□□□□ 0.1
CTSA-218ENST00000607814 HMGB1P09429 215 aaKnown RBP15.66■□□□□ 0.1
CTSA-218ENST00000607814 HTRA4P83105 476 aaPredicted RBP15.66■□□□□ 0.1
CTSA-218ENST00000607814 ARHGAP1Q07960 439 aa15.66■□□□□ 0.1
CTSA-218ENST00000607814 PGM5Q15124 567 aa15.66■□□□□ 0.1
CTSA-218ENST00000607814 UBE2SQ16763 222 aa15.66■□□□□ 0.1
CTSA-218ENST00000607814 HEATR3Q7Z4Q2 680 aa15.66■□□□□ 0.1
CTSA-218ENST00000607814 SMARCC2Q8TAQ2 1214 aa15.66■□□□□ 0.1
CTSA-218ENST00000607814 SP7Q8TDD2 431 aaPredicted RBP15.66■□□□□ 0.1
CTSA-218ENST00000607814 IWS1Q96ST2 819 aa15.66■□□□□ 0.1
CTSA-218ENST00000607814 UPF3BQ9BZI7 483 aaKnown RBP15.66■□□□□ 0.1
CTSA-218ENST00000607814 BCAS3Q9H6U6 928 aa15.66■□□□□ 0.1
CTSA-218ENST00000607814 MEIS2O14770 477 aa15.65■□□□□ 0.1
CTSA-218ENST00000607814 NCK2O43639 380 aa15.65■□□□□ 0.1
CTSA-218ENST00000607814 DTNBO60941 627 aa15.65■□□□□ 0.1
CTSA-218ENST00000607814 LGR5O75473 907 aa15.65■□□□□ 0.1
CTSA-218ENST00000607814 AMHP03971 560 aa15.65■□□□□ 0.1
CTSA-218ENST00000607814 SMARCA1P28370 1054 aa15.65■□□□□ 0.1
CTSA-218ENST00000607814 GHRHRQ02643 423 aa15.65■□□□□ 0.1
CTSA-218ENST00000607814 FUT2Q10981 343 aa15.65■□□□□ 0.1
CTSA-218ENST00000607814 TYW1BQ6NUM6 668 aa15.65■□□□□ 0.1
CTSA-218ENST00000607814 PABPC5Q96DU9 382 aaKnown RBP15.65■□□□□ 0.1
CTSA-218ENST00000607814 FBXL18Q96ME1 805 aa15.65■□□□□ 0.1
CTSA-218ENST00000607814 C17orf80Q9BSJ5 609 aa15.65■□□□□ 0.1
CTSA-218ENST00000607814 HDAC6Q9UBN7 1215 aa15.65■□□□□ 0.1
CTSA-218ENST00000607814 USP34Q70CQ2 3546 aa15.65■□□□□ 0.1
CTSA-218ENST00000607814 CNTNAP5Q8WYK1 1306 aa15.65■□□□□ 0.1
CTSA-218ENST00000607814 C5orf42Q9H799 3197 aa15.65■□□□□ 0.1
CTSA-218ENST00000607814 C19orf67A6NJJ6 358 aa15.64■□□□□ 0.09
CTSA-218ENST00000607814 EIF3JO75822 258 aaKnown RBP15.64■□□□□ 0.09
CTSA-218ENST00000607814 SEC24BO95487 1268 aa15.64■□□□□ 0.09
CTSA-218ENST00000607814 F2P00734 622 aa15.64■□□□□ 0.09
CTSA-218ENST00000607814 METAP2P50579 478 aaKnown RBP eCLIP15.64■□□□□ 0.09
CTSA-218ENST00000607814 CCT2P78371 535 aaKnown RBP15.64■□□□□ 0.09
CTSA-218ENST00000607814 ZP2Q05996 745 aa15.64■□□□□ 0.09
CTSA-218ENST00000607814 MKRN4PQ13434 485 aaPredicted RBP15.64■□□□□ 0.09
CTSA-218ENST00000607814 TCTN1Q2MV58 587 aa15.64■□□□□ 0.09
CTSA-218ENST00000607814 TRIM71Q2Q1W2 868 aaKnown RBP15.64■□□□□ 0.09
CTSA-218ENST00000607814 EPC2Q52LR7 807 aa15.64■□□□□ 0.09
CTSA-218ENST00000607814 WWC2Q6AWC2 1192 aa15.64■□□□□ 0.09
CTSA-218ENST00000607814 TRAF7Q6Q0C0 670 aa15.64■□□□□ 0.09
CTSA-218ENST00000607814 MICAL3Q7RTP6 2002 aa15.64■□□□□ 0.09
CTSA-218ENST00000607814 VSIG10LQ86VR7 867 aa15.64■□□□□ 0.09
CTSA-218ENST00000607814 BANK1Q8NDB2 785 aa15.64■□□□□ 0.09
CTSA-218ENST00000607814 RBM28Q9NW13 759 aaKnown RBP15.64■□□□□ 0.09
CTSA-218ENST00000607814 DDX41Q9UJV9 622 aaKnown RBP15.64■□□□□ 0.09
CTSA-218ENST00000607814 MRVI1Q9Y6F6 885 aa15.64■□□□□ 0.09
CTSA-218ENST00000607814 COL4A6Q14031 1691 aa15.63■□□□□ 0.09
CTSA-218ENST00000607814 H3BNC9 293 aa15.63■□□□□ 0.09
CTSA-218ENST00000607814 H3BQ06 376 aaPredicted RBP15.63■□□□□ 0.09
CTSA-218ENST00000607814 HAS3O00219 553 aa15.63■□□□□ 0.09
CTSA-218ENST00000607814 PSMA5P28066 241 aa15.63■□□□□ 0.09
CTSA-218ENST00000607814 PSEN2P49810 448 aa15.63■□□□□ 0.09
CTSA-218ENST00000607814 MRPS9P82933 396 aaKnown RBP15.63■□□□□ 0.09
CTSA-218ENST00000607814 SP2Q02086 613 aa15.63■□□□□ 0.09
CTSA-218ENST00000607814 TRAF1Q13077 416 aa15.63■□□□□ 0.09
CTSA-218ENST00000607814 LAMC2Q13753 1193 aa15.63■□□□□ 0.09
CTSA-218ENST00000607814 TOB2Q14106 344 aaPredicted RBP15.63■□□□□ 0.09
CTSA-218ENST00000607814 MBTPS1Q14703 1052 aa15.63■□□□□ 0.09
CTSA-218ENST00000607814 ZNF618Q5T7W0 954 aa15.63■□□□□ 0.09
CTSA-218ENST00000607814 FAM117BQ6P1L5 589 aa15.63■□□□□ 0.09
CTSA-218ENST00000607814 RUFY3Q7L099 469 aa15.63■□□□□ 0.09
CTSA-218ENST00000607814 ADHFE1Q8IWW8 467 aa15.63■□□□□ 0.09
CTSA-218ENST00000607814 PPTC7Q8NI37 304 aa15.63■□□□□ 0.09
CTSA-218ENST00000607814 PGBD1Q96JS3 809 aa15.63■□□□□ 0.09
CTSA-218ENST00000607814 SNX27Q96L92 541 aa15.63■□□□□ 0.09
CTSA-218ENST00000607814 MFSD14AQ96MC6 490 aa15.63■□□□□ 0.09
CTSA-218ENST00000607814 PSTPIP2Q9H939 334 aa15.63■□□□□ 0.09
CTSA-218ENST00000607814 NCOA5Q9HCD5 579 aaKnown RBP15.63■□□□□ 0.09
CTSA-218ENST00000607814 KIAA1217Q5T5P2 1943 aa15.62■□□□□ 0.09
CTSA-218ENST00000607814 ADAMTS3O15072 1205 aa15.62■□□□□ 0.09
CTSA-218ENST00000607814 CCND2P30279 289 aa15.62■□□□□ 0.09
CTSA-218ENST00000607814 MFSD10Q14728 455 aa15.62■□□□□ 0.09
CTSA-218ENST00000607814 KIAA0753Q2KHM9 967 aa15.62■□□□□ 0.09
CTSA-218ENST00000607814 MYOCDQ8IZQ8 938 aa15.62■□□□□ 0.09
CTSA-218ENST00000607814 CUL5Q93034 780 aa15.62■□□□□ 0.09
CTSA-218ENST00000607814 PHKBQ93100 1093 aa15.62■□□□□ 0.09
CTSA-218ENST00000607814 POP1Q99575 1024 aaKnown RBP15.62■□□□□ 0.09
CTSA-218ENST00000607814 NSUN3Q9H649 340 aaKnown RBP15.62■□□□□ 0.09
CTSA-218ENST00000607814 ZSWIM6Q9HCJ5 1215 aa15.62■□□□□ 0.09
CTSA-218ENST00000607814 MAP3K20Q9NYL2 800 aaKnown RBP15.62■□□□□ 0.09
CTSA-218ENST00000607814 TELO2Q9Y4R8 837 aa15.62■□□□□ 0.09
CTSA-218ENST00000607814 PPFIA4O75335 1185 aa15.61■□□□□ 0.09
CTSA-218ENST00000607814 HOXD8P13378 290 aaPredicted RBP15.61■□□□□ 0.09
CTSA-218ENST00000607814 PDIA3P30101 505 aaKnown RBP15.61■□□□□ 0.09
CTSA-218ENST00000607814 NAPAP54920 295 aa15.61■□□□□ 0.09
CTSA-218ENST00000607814 STK3Q13188 491 aa15.61■□□□□ 0.09
CTSA-218ENST00000607814 GPM6BQ13491 265 aa15.61■□□□□ 0.09
CTSA-218ENST00000607814 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.61■□□□□ 0.09
CTSA-218ENST00000607814 DBF4BQ8NFT6 615 aa15.61■□□□□ 0.09
CTSA-218ENST00000607814 ALG1Q9BT22 464 aa15.61■□□□□ 0.09
CTSA-218ENST00000607814 TMEM260Q9NX78 707 aa15.61■□□□□ 0.09
CTSA-218ENST00000607814 CYP46A1Q9Y6A2 500 aa15.61■□□□□ 0.09
CTSA-218ENST00000607814 RSPH10B2B2RC85 870 aa15.6■□□□□ 0.09
CTSA-218ENST00000607814 STXBP3O00186 592 aa15.6■□□□□ 0.09
CTSA-218ENST00000607814 GGPS1O95749 300 aa15.6■□□□□ 0.09
CTSA-218ENST00000607814 RSPH10BP0C881 870 aa15.6■□□□□ 0.09
CTSA-218ENST00000607814 SEMA3FQ13275 785 aa15.6■□□□□ 0.09
CTSA-218ENST00000607814 PLEKHG4Q58EX7 1191 aa15.6■□□□□ 0.09
CTSA-218ENST00000607814 TCEAL5Q5H9L2 206 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms