RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 PRRC2BQ5JSZ5 2229 aaKnown RBP15.29■□□□□ 0.04
CTSA-213ENST00000606782 TRANK1O15050 2925 aa15.29■□□□□ 0.04
CTSA-213ENST00000606782 PTPRSQ13332 1948 aa15.29■□□□□ 0.04
CTSA-213ENST00000606782 DOCK5Q9H7D0 1870 aa15.29■□□□□ 0.04
CTSA-213ENST00000606782 RSPH10B2B2RC85 870 aa15.28■□□□□ 0.04
CTSA-213ENST00000606782 TREHO43280 583 aa15.28■□□□□ 0.04
CTSA-213ENST00000606782 LGR5O75473 907 aa15.28■□□□□ 0.04
CTSA-213ENST00000606782 FOSP01100 380 aaPredicted RBP15.28■□□□□ 0.04
CTSA-213ENST00000606782 RSPH10BP0C881 870 aa15.28■□□□□ 0.04
CTSA-213ENST00000606782 TAP1Q03518 808 aa15.28■□□□□ 0.04
CTSA-213ENST00000606782 IKBKEQ14164 716 aa15.28■□□□□ 0.04
CTSA-213ENST00000606782 HEATR3Q7Z4Q2 680 aa15.28■□□□□ 0.04
CTSA-213ENST00000606782 RPAINQ86UA6 219 aa15.28■□□□□ 0.04
CTSA-213ENST00000606782 UPF3BQ9BZI7 483 aaKnown RBP15.28■□□□□ 0.04
CTSA-213ENST00000606782 V9GY48 417 aaPredicted RBP15.28■□□□□ 0.04
CTSA-213ENST00000606782 NRCAMQ92823 1304 aa15.27■□□□□ 0.04
CTSA-213ENST00000606782 GSTTP1A0A1W2PQM5 241 aa15.27■□□□□ 0.04
CTSA-213ENST00000606782 ARHGEF15O94989 841 aa15.27■□□□□ 0.04
CTSA-213ENST00000606782 GJB5O95377 273 aa15.27■□□□□ 0.04
CTSA-213ENST00000606782 THPOP40225 353 aa15.27■□□□□ 0.04
CTSA-213ENST00000606782 EVCP57679 992 aa15.27■□□□□ 0.04
CTSA-213ENST00000606782 DEFB103AP81534 67 aa15.27■□□□□ 0.04
CTSA-213ENST00000606782 MTMR1Q13613 665 aa15.27■□□□□ 0.04
CTSA-213ENST00000606782 PLEKHG4Q58EX7 1191 aa15.27■□□□□ 0.04
CTSA-213ENST00000606782 FAM26DQ5JW98 314 aa15.27■□□□□ 0.04
CTSA-213ENST00000606782 Q6ZUG5 572 aa15.27■□□□□ 0.04
CTSA-213ENST00000606782 TRIM50Q86XT4 487 aa15.27■□□□□ 0.04
CTSA-213ENST00000606782 IL27Q8NEV9 243 aa15.27■□□□□ 0.04
CTSA-213ENST00000606782 SEPT1Q8WYJ6 367 aa15.27■□□□□ 0.04
CTSA-213ENST00000606782 GLT8D2Q9H1C3 349 aa15.27■□□□□ 0.04
CTSA-213ENST00000606782 EHMT1Q9H9B1 1298 aa15.27■□□□□ 0.04
CTSA-213ENST00000606782 PDRG1Q9NUG6 133 aa15.27■□□□□ 0.04
CTSA-213ENST00000606782 SETD4Q9NVD3 440 aa15.27■□□□□ 0.04
CTSA-213ENST00000606782 BARHL2Q9NY43 387 aa15.27■□□□□ 0.04
CTSA-213ENST00000606782 NID2Q14112 1375 aa15.26■□□□□ 0.03
CTSA-213ENST00000606782 KLF18A0A0U1RQI7 1052 aa15.26■□□□□ 0.03
CTSA-213ENST00000606782 STXBP3O00186 592 aa15.26■□□□□ 0.03
CTSA-213ENST00000606782 TLL1O43897 1013 aa15.26■□□□□ 0.03
CTSA-213ENST00000606782 IGFBP4P22692 258 aa15.26■□□□□ 0.03
CTSA-213ENST00000606782 CDC27P30260 824 aa15.26■□□□□ 0.03
CTSA-213ENST00000606782 TCF7P36402 384 aaPredicted RBP15.26■□□□□ 0.03
CTSA-213ENST00000606782 CLK2P49760 499 aaKnown RBP15.26■□□□□ 0.03
CTSA-213ENST00000606782 NEK4P51957 841 aa15.26■□□□□ 0.03
CTSA-213ENST00000606782 TOB2Q14106 344 aaPredicted RBP15.26■□□□□ 0.03
CTSA-213ENST00000606782 UTP14CQ5TAP6 766 aaKnown RBP15.26■□□□□ 0.03
CTSA-213ENST00000606782 DBF4BQ8NFT6 615 aa15.26■□□□□ 0.03
CTSA-213ENST00000606782 LMBR1Q8WVP7 490 aa15.26■□□□□ 0.03
CTSA-213ENST00000606782 ATXN2LQ8WWM7 1075 aaKnown RBP15.26■□□□□ 0.03
CTSA-213ENST00000606782 SYMPKQ92797 1274 aaKnown RBP15.26■□□□□ 0.03
CTSA-213ENST00000606782 RAD9AQ99638 391 aa15.26■□□□□ 0.03
CTSA-213ENST00000606782 MXRA8Q9BRK3 442 aa15.26■□□□□ 0.03
CTSA-213ENST00000606782 KAT6AQ92794 2004 aa15.26■□□□□ 0.03
CTSA-213ENST00000606782 NFASCO94856 1347 aa15.25■□□□□ 0.03
CTSA-213ENST00000606782 VCANP13611 3396 aa15.25■□□□□ 0.03
CTSA-213ENST00000606782 CCDC196A0A1B0GTZ2 297 aa15.25■□□□□ 0.03
CTSA-213ENST00000606782 EPOPA6NHQ4 379 aa15.25■□□□□ 0.03
CTSA-213ENST00000606782 GOLGA8AA7E2F4 631 aa15.25■□□□□ 0.03
CTSA-213ENST00000606782 GOLGA8BA8MQT2 603 aa15.25■□□□□ 0.03
CTSA-213ENST00000606782 ADCY7P51828 1080 aa15.25■□□□□ 0.03
CTSA-213ENST00000606782 NAPAP54920 295 aa15.25■□□□□ 0.03
CTSA-213ENST00000606782 AP3B2Q13367 1082 aa15.25■□□□□ 0.03
CTSA-213ENST00000606782 RABEP1Q15276 862 aa15.25■□□□□ 0.03
CTSA-213ENST00000606782 TJAP1Q5JTD0 557 aa15.25■□□□□ 0.03
CTSA-213ENST00000606782 SMARCAD1Q9H4L7 1026 aa15.25■□□□□ 0.03
CTSA-213ENST00000606782 PRDM6Q9NQX0 595 aa15.25■□□□□ 0.03
CTSA-213ENST00000606782 KCNH7Q9NS40 1196 aa15.25■□□□□ 0.03
CTSA-213ENST00000606782 ERAP1Q9NZ08 941 aa15.25■□□□□ 0.03
CTSA-213ENST00000606782 MTCH2Q9Y6C9 303 aa15.25■□□□□ 0.03
CTSA-213ENST00000606782 MBLAC1A4D2B0 266 aaPredicted RBP15.24■□□□□ 0.03
CTSA-213ENST00000606782 SMCO2A6NFE2 343 aa15.24■□□□□ 0.03
CTSA-213ENST00000606782 MEIS1O00470 390 aa15.24■□□□□ 0.03
CTSA-213ENST00000606782 ADD1P35611 737 aaKnown RBP15.24■□□□□ 0.03
CTSA-213ENST00000606782 SREBF1P36956 1147 aa15.24■□□□□ 0.03
CTSA-213ENST00000606782 SP4Q02446 784 aa15.24■□□□□ 0.03
CTSA-213ENST00000606782 PFKFB3Q16875 520 aaPredicted RBP15.24■□□□□ 0.03
CTSA-213ENST00000606782 CEP55Q53EZ4 464 aa15.24■□□□□ 0.03
CTSA-213ENST00000606782 CYP2W1Q8TAV3 490 aa15.24■□□□□ 0.03
CTSA-213ENST00000606782 CRYGNQ8WXF5 182 aa15.24■□□□□ 0.03
CTSA-213ENST00000606782 BRF1Q92994 677 aa15.24■□□□□ 0.03
CTSA-213ENST00000606782 PCYT2Q99447 389 aa15.24■□□□□ 0.03
CTSA-213ENST00000606782 THEGQ9P2T0 379 aa15.24■□□□□ 0.03
CTSA-213ENST00000606782 SPTBN5Q9NRC6 3674 aaKnown RBP15.23■□□□□ 0.03
CTSA-213ENST00000606782 MICAL3Q7RTP6 2002 aa15.23■□□□□ 0.03
CTSA-213ENST00000606782 ESYT2A0FGR8 921 aa15.23■□□□□ 0.03
CTSA-213ENST00000606782 LCHNA4D1U4 455 aa15.23■□□□□ 0.03
CTSA-213ENST00000606782 RFXAPO00287 272 aa15.23■□□□□ 0.03
CTSA-213ENST00000606782 LPXNO60711 386 aa15.23■□□□□ 0.03
CTSA-213ENST00000606782 METAP2P50579 478 aaKnown RBP eCLIP15.23■□□□□ 0.03
CTSA-213ENST00000606782 ERVK-21P61565 698 aa15.23■□□□□ 0.03
CTSA-213ENST00000606782 HTRA4P83105 476 aaPredicted RBP15.23■□□□□ 0.03
CTSA-213ENST00000606782 ARHGAP4P98171 946 aa15.23■□□□□ 0.03
CTSA-213ENST00000606782 FGD1P98174 961 aa15.23■□□□□ 0.03
CTSA-213ENST00000606782 ANKRD1Q15327 319 aa15.23■□□□□ 0.03
CTSA-213ENST00000606782 MARCH8Q5T0T0 291 aa15.23■□□□□ 0.03
CTSA-213ENST00000606782 TAF2Q6P1X5 1199 aa15.23■□□□□ 0.03
CTSA-213ENST00000606782 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.23■□□□□ 0.03
CTSA-213ENST00000606782 NIPA1Q7RTP0 329 aa15.23■□□□□ 0.03
CTSA-213ENST00000606782 TMCO2Q7Z6W1 182 aaPredicted RBP15.23■□□□□ 0.03
CTSA-213ENST00000606782 PPM1EQ8WY54 764 aa15.23■□□□□ 0.03
CTSA-213ENST00000606782 SEPT8Q92599 483 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms