RNA–Protein interactions for RNA: ENST00000605358.5

CCDC12-212, Transcript of coiled-coil domain containing 12, humanhuman

TSL 5

Gene CCDC12, Length 402 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-212ENST00000605358 RTEL1Q9NZ71 1219 aa20.48■□□□□ 0.87
CCDC12-212ENST00000605358 FAM50BQ9Y247 325 aa20.48■□□□□ 0.87
CCDC12-212ENST00000605358 RWDD3Q9Y3V2 267 aa20.48■□□□□ 0.87
CCDC12-212ENST00000605358 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.47■□□□□ 0.87
CCDC12-212ENST00000605358 MEIS2O14770 477 aa20.47■□□□□ 0.87
CCDC12-212ENST00000605358 KCNA5P22460 613 aa20.47■□□□□ 0.87
CCDC12-212ENST00000605358 COL19A1Q14993 1142 aa20.47■□□□□ 0.87
CCDC12-212ENST00000605358 FAM43BQ6ZT52 329 aaPredicted RBP20.47■□□□□ 0.87
CCDC12-212ENST00000605358 RSPH3Q86UC2 560 aa20.47■□□□□ 0.87
CCDC12-212ENST00000605358 TEX2Q8IWB9 1127 aa20.47■□□□□ 0.87
CCDC12-212ENST00000605358 MB21D2Q8IYB1 491 aaPredicted RBP20.47■□□□□ 0.87
CCDC12-212ENST00000605358 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.47■□□□□ 0.87
CCDC12-212ENST00000605358 NEK9Q8TD19 979 aa20.47■□□□□ 0.87
CCDC12-212ENST00000605358 RALGAPA2Q2PPJ7 1873 aa20.47■□□□□ 0.87
CCDC12-212ENST00000605358 CALM1P0DP23 149 aa20.46■□□□□ 0.87
CCDC12-212ENST00000605358 CALM2P0DP24 149 aa20.46■□□□□ 0.87
CCDC12-212ENST00000605358 CALM3P0DP25 149 aa20.46■□□□□ 0.87
CCDC12-212ENST00000605358 ANTXR2P58335 489 aa20.46■□□□□ 0.87
CCDC12-212ENST00000605358 ARHGAP4P98171 946 aa20.46■□□□□ 0.87
CCDC12-212ENST00000605358 GPM6BQ13491 265 aa20.46■□□□□ 0.87
CCDC12-212ENST00000605358 CASC1Q6TDU7 716 aa20.46■□□□□ 0.87
CCDC12-212ENST00000605358 ZNF654Q8IZM8 581 aa20.46■□□□□ 0.87
CCDC12-212ENST00000605358 GJD3Q8N144 294 aa20.46■□□□□ 0.87
CCDC12-212ENST00000605358 BANK1Q8NDB2 785 aa20.46■□□□□ 0.87
CCDC12-212ENST00000605358 LMBR1Q8WVP7 490 aa20.46■□□□□ 0.87
CCDC12-212ENST00000605358 SEPT1Q8WYJ6 367 aa20.46■□□□□ 0.87
CCDC12-212ENST00000605358 IL17RAQ96F46 866 aa20.46■□□□□ 0.87
CCDC12-212ENST00000605358 LY9Q9HBG7 655 aa20.46■□□□□ 0.87
CCDC12-212ENST00000605358 GRXCR2A6NFK2 248 aa20.45■□□□□ 0.86
CCDC12-212ENST00000605358 C5orf67F2Z3F1 127 aa20.45■□□□□ 0.86
CCDC12-212ENST00000605358 CTSHP09668 335 aa20.45■□□□□ 0.86
CCDC12-212ENST00000605358 PTCRAQ6ISU1 281 aaPredicted RBP20.45■□□□□ 0.86
CCDC12-212ENST00000605358 USP17L6PQ6QN14 398 aa20.45■□□□□ 0.86
CCDC12-212ENST00000605358 TNPO1Q92973 898 aaKnown RBP20.45■□□□□ 0.86
CCDC12-212ENST00000605358 PABPC5Q96DU9 382 aaKnown RBP20.45■□□□□ 0.86
CCDC12-212ENST00000605358 TMEM87BQ96K49 555 aa20.45■□□□□ 0.86
CCDC12-212ENST00000605358 LMAN2LQ9H0V9 348 aa20.45■□□□□ 0.86
CCDC12-212ENST00000605358 NSUN3Q9H649 340 aaKnown RBP20.45■□□□□ 0.86
CCDC12-212ENST00000605358 EHMT1Q9H9B1 1298 aa20.45■□□□□ 0.86
CCDC12-212ENST00000605358 ERAP1Q9NZ08 941 aa20.45■□□□□ 0.86
CCDC12-212ENST00000605358 NLRC5Q86WI3 1866 aa20.45■□□□□ 0.86
CCDC12-212ENST00000605358 DOCK5Q9H7D0 1870 aa20.44■□□□□ 0.86
CCDC12-212ENST00000605358 UPP2O95045 317 aa20.44■□□□□ 0.86
CCDC12-212ENST00000605358 ALADP13716 330 aa20.44■□□□□ 0.86
CCDC12-212ENST00000605358 TCF7P36402 384 aaPredicted RBP20.44■□□□□ 0.86
CCDC12-212ENST00000605358 LIFRP42702 1097 aa20.44■□□□□ 0.86
CCDC12-212ENST00000605358 UTP14CQ5TAP6 766 aaKnown RBP20.44■□□□□ 0.86
CCDC12-212ENST00000605358 FIBCD1Q8N539 461 aa20.44■□□□□ 0.86
CCDC12-212ENST00000605358 PSTPIP2Q9H939 334 aa20.44■□□□□ 0.86
CCDC12-212ENST00000605358 PRKAG3Q9UGI9 489 aa20.44■□□□□ 0.86
CCDC12-212ENST00000605358 SQORQ9Y6N5 450 aa20.44■□□□□ 0.86
CCDC12-212ENST00000605358 MBLAC1A4D2B0 266 aaPredicted RBP20.43■□□□□ 0.86
CCDC12-212ENST00000605358 CHRNA1P02708 482 aa20.43■□□□□ 0.86
CCDC12-212ENST00000605358 KCNA2P16389 499 aa20.43■□□□□ 0.86
CCDC12-212ENST00000605358 MCM5P33992 734 aa20.43■□□□□ 0.86
CCDC12-212ENST00000605358 TRIM50Q86XT4 487 aa20.43■□□□□ 0.86
CCDC12-212ENST00000605358 C11orf84Q9BUA3 381 aaPredicted RBP20.43■□□□□ 0.86
CCDC12-212ENST00000605358 SMARCAD1Q9H4L7 1026 aa20.43■□□□□ 0.86
CCDC12-212ENST00000605358 CD320Q9NPF0 282 aa20.43■□□□□ 0.86
CCDC12-212ENST00000605358 TAF6LQ9Y6J9 622 aa20.43■□□□□ 0.86
CCDC12-212ENST00000605358 CCDC69A6NI79 296 aa20.42■□□□□ 0.86
CCDC12-212ENST00000605358 RRN3P2A6NIE6 340 aa20.42■□□□□ 0.86
CCDC12-212ENST00000605358 BMPR1AP36894 532 aa20.42■□□□□ 0.86
CCDC12-212ENST00000605358 PPFIA1Q13136 1202 aa20.42■□□□□ 0.86
CCDC12-212ENST00000605358 PIBF1Q8WXW3 757 aa20.42■□□□□ 0.86
CCDC12-212ENST00000605358 CLP1Q92989 425 aaKnown RBP20.42■□□□□ 0.86
CCDC12-212ENST00000605358 C11orf16Q9NQ32 467 aa20.42■□□□□ 0.86
CCDC12-212ENST00000605358 RBM8AQ9Y5S9 174 aaKnown RBP20.42■□□□□ 0.86
CCDC12-212ENST00000605358 PRR33A8MZF0 331 aa20.41■□□□□ 0.86
CCDC12-212ENST00000605358 HOXD11P31277 338 aaPredicted RBP20.41■□□□□ 0.86
CCDC12-212ENST00000605358 MGAT3Q09327 533 aa20.41■□□□□ 0.86
CCDC12-212ENST00000605358 SRBD1Q8N5C6 995 aaKnown RBP20.41■□□□□ 0.86
CCDC12-212ENST00000605358 KHSRPQ92945 711 aaKnown RBP eCLIP20.41■□□□□ 0.86
CCDC12-212ENST00000605358 PLVAPQ9BX97 442 aa20.41■□□□□ 0.86
CCDC12-212ENST00000605358 OSBPL7Q9BZF2 842 aa20.41■□□□□ 0.86
CCDC12-212ENST00000605358 TUBE1Q9UJT0 475 aa20.41■□□□□ 0.86
CCDC12-212ENST00000605358 UBIAD1Q9Y5Z9 338 aa20.41■□□□□ 0.86
CCDC12-212ENST00000605358 TTC3P53804 2025 aa20.41■□□□□ 0.86
CCDC12-212ENST00000605358 GSTTP1A0A1W2PQM5 241 aa20.4■□□□□ 0.86
CCDC12-212ENST00000605358 SPDYE3A6NKU9 549 aa20.4■□□□□ 0.86
CCDC12-212ENST00000605358 ENPP3O14638 875 aa20.4■□□□□ 0.86
CCDC12-212ENST00000605358 PRC1O43663 620 aa20.4■□□□□ 0.86
CCDC12-212ENST00000605358 ATP9AO75110 1047 aa20.4■□□□□ 0.86
CCDC12-212ENST00000605358 ITGB5P18084 799 aa20.4■□□□□ 0.86
CCDC12-212ENST00000605358 SP4Q02446 784 aa20.4■□□□□ 0.86
CCDC12-212ENST00000605358 MTMR1Q13613 665 aa20.4■□□□□ 0.86
CCDC12-212ENST00000605358 GRIK4Q16099 956 aa20.4■□□□□ 0.86
CCDC12-212ENST00000605358 TCEAL5Q5H9L2 206 aa20.4■□□□□ 0.86
CCDC12-212ENST00000605358 NFXL1Q6ZNB6 911 aa20.4■□□□□ 0.86
CCDC12-212ENST00000605358 TSHZ1Q6ZSZ6 1077 aa20.4■□□□□ 0.86
CCDC12-212ENST00000605358 GLG1Q92896 1179 aa20.4■□□□□ 0.86
CCDC12-212ENST00000605358 FTHL17Q9BXU8 183 aa20.4■□□□□ 0.86
CCDC12-212ENST00000605358 RC3H2Q9HBD1 1191 aaKnown RBP20.4■□□□□ 0.86
CCDC12-212ENST00000605358 JADE2Q9NQC1 790 aa20.4■□□□□ 0.86
CCDC12-212ENST00000605358 ADGRA3Q8IWK6 1321 aa20.39■□□□□ 0.85
CCDC12-212ENST00000605358 SH2B2O14492 632 aaPredicted RBP20.39■□□□□ 0.85
CCDC12-212ENST00000605358 GHRP10912 638 aa20.39■□□□□ 0.85
CCDC12-212ENST00000605358 IL9P15248 144 aa20.39■□□□□ 0.85
CCDC12-212ENST00000605358 SSTR3P32745 418 aaPredicted RBP20.39■□□□□ 0.85
CCDC12-212ENST00000605358 LPIN1Q14693 890 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms