RNA–Protein interactions for RNA: ENST00000603722.1

TUBE1-206, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-206ENST00000603722 RSPH10BP0C881 870 aa18.71■□□□□ 0.59
TUBE1-206ENST00000603722 GNAT1P11488 350 aa18.71■□□□□ 0.59
TUBE1-206ENST00000603722 MARK3P27448 753 aa18.71■□□□□ 0.59
TUBE1-206ENST00000603722 CLK2P49760 499 aaKnown RBP18.71■□□□□ 0.59
TUBE1-206ENST00000603722 ADGRE1Q14246 886 aa18.71■□□□□ 0.59
TUBE1-206ENST00000603722 TMCO2Q7Z6W1 182 aaPredicted RBP18.71■□□□□ 0.59
TUBE1-206ENST00000603722 USP38Q8NB14 1042 aa18.71■□□□□ 0.59
TUBE1-206ENST00000603722 LMBR1Q8WVP7 490 aa18.71■□□□□ 0.59
TUBE1-206ENST00000603722 SEPT1Q8WYJ6 367 aa18.71■□□□□ 0.59
TUBE1-206ENST00000603722 JPH1Q9HDC5 661 aaPredicted RBP18.71■□□□□ 0.59
TUBE1-206ENST00000603722 KCNH7Q9NS40 1196 aa18.71■□□□□ 0.59
TUBE1-206ENST00000603722 CHD9Q3L8U1 2897 aa18.7■□□□□ 0.58
TUBE1-206ENST00000603722 GSTTP1A0A1W2PQM5 241 aa18.7■□□□□ 0.58
TUBE1-206ENST00000603722 DLL1O00548 723 aa18.7■□□□□ 0.58
TUBE1-206ENST00000603722 EPB41L2O43491 1005 aaKnown RBP18.7■□□□□ 0.58
TUBE1-206ENST00000603722 SREBF1P36956 1147 aa18.7■□□□□ 0.58
TUBE1-206ENST00000603722 DEFB103AP81534 67 aa18.7■□□□□ 0.58
TUBE1-206ENST00000603722 CEP55Q53EZ4 464 aa18.7■□□□□ 0.58
TUBE1-206ENST00000603722 JAKMIP3Q5VZ66 844 aa18.7■□□□□ 0.58
TUBE1-206ENST00000603722 RUFY3Q7L099 469 aa18.7■□□□□ 0.58
TUBE1-206ENST00000603722 GLG1Q92896 1179 aa18.7■□□□□ 0.58
TUBE1-206ENST00000603722 EMSYQ7Z589 1322 aa18.7■□□□□ 0.58
TUBE1-206ENST00000603722 PRPF3O43395 683 aaKnown RBP18.69■□□□□ 0.58
TUBE1-206ENST00000603722 TLL1O43897 1013 aa18.69■□□□□ 0.58
TUBE1-206ENST00000603722 LGR5O75473 907 aa18.69■□□□□ 0.58
TUBE1-206ENST00000603722 ARP10275 920 aa18.69■□□□□ 0.58
TUBE1-206ENST00000603722 IGFBP4P22692 258 aa18.69■□□□□ 0.58
TUBE1-206ENST00000603722 CCT2P78371 535 aaKnown RBP18.69■□□□□ 0.58
TUBE1-206ENST00000603722 AKAP17AQ02040 695 aaKnown RBP18.69■□□□□ 0.58
TUBE1-206ENST00000603722 PPFIA1Q13136 1202 aa18.69■□□□□ 0.58
TUBE1-206ENST00000603722 PKN1Q16512 942 aa18.69■□□□□ 0.58
TUBE1-206ENST00000603722 CCDC12Q8WUD4 166 aaPredicted RBP18.69■□□□□ 0.58
TUBE1-206ENST00000603722 SDF4Q9BRK5 362 aa18.69■□□□□ 0.58
TUBE1-206ENST00000603722 SLC26A6Q9BXS9 759 aa18.69■□□□□ 0.58
TUBE1-206ENST00000603722 NCOA5Q9HCD5 579 aaKnown RBP18.69■□□□□ 0.58
TUBE1-206ENST00000603722 ZSWIM6Q9HCJ5 1215 aa18.69■□□□□ 0.58
TUBE1-206ENST00000603722 AGO4Q9HCK5 861 aaKnown RBP18.69■□□□□ 0.58
TUBE1-206ENST00000603722 PPP4R2Q9NY27 417 aa18.69■□□□□ 0.58
TUBE1-206ENST00000603722 ERAP1Q9NZ08 941 aa18.69■□□□□ 0.58
TUBE1-206ENST00000603722 SLC9A2Q9UBY0 812 aa18.69■□□□□ 0.58
TUBE1-206ENST00000603722 NRCAMQ92823 1304 aa18.69■□□□□ 0.58
TUBE1-206ENST00000603722 ABHD14A-ACY1A0A1B0GW23 586 aa18.68■□□□□ 0.58
TUBE1-206ENST00000603722 ESYT2A0FGR8 921 aa18.68■□□□□ 0.58
TUBE1-206ENST00000603722 KIF28PB7ZC32 967 aa18.68■□□□□ 0.58
TUBE1-206ENST00000603722 ADAMTS3O15072 1205 aa18.68■□□□□ 0.58
TUBE1-206ENST00000603722 CAND2O75155 1236 aa18.68■□□□□ 0.58
TUBE1-206ENST00000603722 ARHGEF15O94989 841 aa18.68■□□□□ 0.58
TUBE1-206ENST00000603722 PDIA3P30101 505 aaKnown RBP18.68■□□□□ 0.58
TUBE1-206ENST00000603722 ZNF76P36508 570 aa18.68■□□□□ 0.58
TUBE1-206ENST00000603722 ADAM17P78536 824 aa18.68■□□□□ 0.58
TUBE1-206ENST00000603722 ITGB3BPQ13352 177 aaPredicted RBP18.68■□□□□ 0.58
TUBE1-206ENST00000603722 TOB2Q14106 344 aaPredicted RBP18.68■□□□□ 0.58
TUBE1-206ENST00000603722 IKBKEQ14164 716 aa18.68■□□□□ 0.58
TUBE1-206ENST00000603722 NTRK3Q16288 839 aa18.68■□□□□ 0.58
TUBE1-206ENST00000603722 PPM1EQ8WY54 764 aa18.68■□□□□ 0.58
TUBE1-206ENST00000603722 UPF3BQ9BZI7 483 aaKnown RBP18.68■□□□□ 0.58
TUBE1-206ENST00000603722 ZMYND12Q9H0C1 365 aa18.68■□□□□ 0.58
TUBE1-206ENST00000603722 SMARCAD1Q9H4L7 1026 aa18.68■□□□□ 0.58
TUBE1-206ENST00000603722 CERS4Q9HA82 394 aa18.68■□□□□ 0.58
TUBE1-206ENST00000603722 C6orf50Q9HD87 102 aa18.68■□□□□ 0.58
TUBE1-206ENST00000603722 CYP46A1Q9Y6A2 500 aa18.68■□□□□ 0.58
TUBE1-206ENST00000603722 NFASCO94856 1347 aa18.68■□□□□ 0.58
TUBE1-206ENST00000603722 A0A0C4DFX4 3053 aa18.68■□□□□ 0.58
TUBE1-206ENST00000603722 SCN5AQ14524 2016 aa18.67■□□□□ 0.58
TUBE1-206ENST00000603722 EFCAB14O75071 495 aa18.67■□□□□ 0.58
TUBE1-206ENST00000603722 EVCP57679 992 aa18.67■□□□□ 0.58
TUBE1-206ENST00000603722 GRIK4Q16099 956 aa18.67■□□□□ 0.58
TUBE1-206ENST00000603722 RUFY4Q6ZNE9 571 aa18.67■□□□□ 0.58
TUBE1-206ENST00000603722 REXO1Q8N1G1 1221 aaKnown RBP18.67■□□□□ 0.58
TUBE1-206ENST00000603722 DBF4BQ8NFT6 615 aa18.67■□□□□ 0.58
TUBE1-206ENST00000603722 ZBED2Q9BTP6 218 aa18.67■□□□□ 0.58
TUBE1-206ENST00000603722 RNF26Q9BY78 433 aaPredicted RBP18.67■□□□□ 0.58
TUBE1-206ENST00000603722 VCANP13611 3396 aa18.67■□□□□ 0.58
TUBE1-206ENST00000603722 FAM86B1E9PN63 330 aa18.66■□□□□ 0.58
TUBE1-206ENST00000603722 DDX39AO00148 427 aaKnown RBP18.66■□□□□ 0.58
TUBE1-206ENST00000603722 MEIS1O00470 390 aa18.66■□□□□ 0.58
TUBE1-206ENST00000603722 FAM86B2P0C5J1 330 aa18.66■□□□□ 0.58
TUBE1-206ENST00000603722 IFNAR1P17181 557 aa18.66■□□□□ 0.58
TUBE1-206ENST00000603722 ACTR2P61160 394 aa18.66■□□□□ 0.58
TUBE1-206ENST00000603722 TAP1Q03518 808 aa18.66■□□□□ 0.58
TUBE1-206ENST00000603722 PLEKHG4Q58EX7 1191 aa18.66■□□□□ 0.58
TUBE1-206ENST00000603722 PCYT2Q99447 389 aa18.66■□□□□ 0.58
TUBE1-206ENST00000603722 LARP6Q9BRS8 491 aaKnown RBP18.66■□□□□ 0.58
TUBE1-206ENST00000603722 OSBPL7Q9BZF2 842 aa18.66■□□□□ 0.58
TUBE1-206ENST00000603722 AZI2Q9H6S1 392 aa18.66■□□□□ 0.58
TUBE1-206ENST00000603722 VPS54Q9P1Q0 977 aa18.66■□□□□ 0.58
TUBE1-206ENST00000603722 TUBE1Q9UJT0 475 aa18.66■□□□□ 0.58
TUBE1-206ENST00000603722 LCHNA4D1U4 455 aa18.65■□□□□ 0.58
TUBE1-206ENST00000603722 GNA11P29992 359 aa18.65■□□□□ 0.58
TUBE1-206ENST00000603722 IGBP1P78318 339 aa18.65■□□□□ 0.58
TUBE1-206ENST00000603722 FAM117BQ6P1L5 589 aa18.65■□□□□ 0.58
TUBE1-206ENST00000603722 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.65■□□□□ 0.58
TUBE1-206ENST00000603722 NIPA1Q7RTP0 329 aa18.65■□□□□ 0.58
TUBE1-206ENST00000603722 SPRED2Q7Z698 418 aa18.65■□□□□ 0.58
TUBE1-206ENST00000603722 PLA2G4DQ86XP0 818 aa18.65■□□□□ 0.58
TUBE1-206ENST00000603722 CCDC148Q8NFR7 591 aa18.65■□□□□ 0.58
TUBE1-206ENST00000603722 RASGRP4Q8TDF6 673 aa18.65■□□□□ 0.58
TUBE1-206ENST00000603722 ARNTL2Q8WYA1 636 aa18.65■□□□□ 0.58
TUBE1-206ENST00000603722 TM6SF1Q9BZW5 370 aa18.65■□□□□ 0.58
TUBE1-206ENST00000603722 TRPC6Q9Y210 931 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms