RNA–Protein interactions for RNA: ENST00000603451.1

SQSTM1P1-201, Transcript of sequestosome 1 pseudogene 1, humanhuman

BASIC

Gene SQSTM1P1, Length 859 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1P1-201ENST00000603451 LGR5O75473 907 aa10.7□□□□□ -0.7
SQSTM1P1-201ENST00000603451 LGALS2P05162 132 aa10.7□□□□□ -0.7
SQSTM1P1-201ENST00000603451 RPLP2P05387 115 aaKnown RBP10.7□□□□□ -0.7
SQSTM1P1-201ENST00000603451 TCF7P36402 384 aaPredicted RBP10.7□□□□□ -0.7
SQSTM1P1-201ENST00000603451 ACTR2P61160 394 aa10.7□□□□□ -0.7
SQSTM1P1-201ENST00000603451 BEX3Q00994 111 aa10.7□□□□□ -0.7
SQSTM1P1-201ENST00000603451 TMEM266Q2M3C6 531 aa10.7□□□□□ -0.7
SQSTM1P1-201ENST00000603451 FAM160B1Q5W0V3 765 aa10.7□□□□□ -0.7
SQSTM1P1-201ENST00000603451 ARL6IP4Q66PJ3 421 aaKnown RBP10.7□□□□□ -0.7
SQSTM1P1-201ENST00000603451 MIS18BP1Q6P0N0 1132 aa10.7□□□□□ -0.7
SQSTM1P1-201ENST00000603451 PLPPR4Q7Z2D5 763 aa10.7□□□□□ -0.7
SQSTM1P1-201ENST00000603451 POTEDQ86YR6 584 aa10.7□□□□□ -0.7
SQSTM1P1-201ENST00000603451 SLC43A3Q8NBI5 491 aa10.7□□□□□ -0.7
SQSTM1P1-201ENST00000603451 NEK9Q8TD19 979 aa10.7□□□□□ -0.7
SQSTM1P1-201ENST00000603451 PAWRQ96IZ0 340 aaKnown RBP10.7□□□□□ -0.7
SQSTM1P1-201ENST00000603451 ZFP91Q96JP5 570 aaPredicted RBP10.7□□□□□ -0.7
SQSTM1P1-201ENST00000603451 TOX2Q96NM4 488 aa10.7□□□□□ -0.7
SQSTM1P1-201ENST00000603451 MTMR9Q96QG7 549 aa10.7□□□□□ -0.7
SQSTM1P1-201ENST00000603451 RAB34Q9BZG1 259 aa10.7□□□□□ -0.7
SQSTM1P1-201ENST00000603451 SMARCAD1Q9H4L7 1026 aa10.7□□□□□ -0.7
SQSTM1P1-201ENST00000603451 AZI2Q9H6S1 392 aa10.7□□□□□ -0.7
SQSTM1P1-201ENST00000603451 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.7□□□□□ -0.7
SQSTM1P1-201ENST00000603451 ERAP1Q9NZ08 941 aa10.7□□□□□ -0.7
SQSTM1P1-201ENST00000603451 PCDHA10Q9Y5I2 948 aa10.7□□□□□ -0.7
SQSTM1P1-201ENST00000603451 ATP6V1DQ9Y5K8 247 aa10.7□□□□□ -0.7
SQSTM1P1-201ENST00000603451 MARCH6O60337 910 aa10.69□□□□□ -0.7
SQSTM1P1-201ENST00000603451 PSAPP07602 524 aa10.69□□□□□ -0.7
SQSTM1P1-201ENST00000603451 OR52Z1P0C646 297 aa10.69□□□□□ -0.7
SQSTM1P1-201ENST00000603451 SUPT20HL2P0C7V6 817 aa10.69□□□□□ -0.7
SQSTM1P1-201ENST00000603451 ZSCAN22P10073 491 aaPredicted RBP10.69□□□□□ -0.7
SQSTM1P1-201ENST00000603451 RESTQ13127 1097 aa10.69□□□□□ -0.7
SQSTM1P1-201ENST00000603451 TMEM63BQ5T3F8 832 aa10.69□□□□□ -0.7
SQSTM1P1-201ENST00000603451 CXCL17Q6UXB2 119 aa10.69□□□□□ -0.7
SQSTM1P1-201ENST00000603451 ABHD15Q6UXT9 468 aa10.69□□□□□ -0.7
SQSTM1P1-201ENST00000603451 ANKRD33Q7Z3H0 272 aa10.69□□□□□ -0.7
SQSTM1P1-201ENST00000603451 KCTD17Q8N5Z5 321 aa10.69□□□□□ -0.7
SQSTM1P1-201ENST00000603451 DIS3LQ8TF46 1054 aaKnown RBP10.69□□□□□ -0.7
SQSTM1P1-201ENST00000603451 HAS1Q92839 578 aa10.69□□□□□ -0.7
SQSTM1P1-201ENST00000603451 ATP6V0A1Q93050 837 aa10.69□□□□□ -0.7
SQSTM1P1-201ENST00000603451 FAM167AQ96KS9 214 aa10.69□□□□□ -0.7
SQSTM1P1-201ENST00000603451 C16orf70Q9BSU1 422 aa10.69□□□□□ -0.7
SQSTM1P1-201ENST00000603451 DAXXQ9UER7 740 aaPredicted RBP10.69□□□□□ -0.7
SQSTM1P1-201ENST00000603451 VAV3Q9UKW4 847 aa10.69□□□□□ -0.7
SQSTM1P1-201ENST00000603451 PCDHA12Q9UN75 941 aa10.69□□□□□ -0.7
SQSTM1P1-201ENST00000603451 COL1A2P08123 1366 aa10.68□□□□□ -0.7
SQSTM1P1-201ENST00000603451 GSTTP1A0A1W2PQM5 241 aa10.68□□□□□ -0.7
SQSTM1P1-201ENST00000603451 H3BRB1 525 aa10.68□□□□□ -0.7
SQSTM1P1-201ENST00000603451 ARVCFO00192 962 aa10.68□□□□□ -0.7
SQSTM1P1-201ENST00000603451 TLR3O15455 904 aaKnown RBP10.68□□□□□ -0.7
SQSTM1P1-201ENST00000603451 SLC26A4O43511 780 aa10.68□□□□□ -0.7
SQSTM1P1-201ENST00000603451 CCNE2O96020 404 aa10.68□□□□□ -0.7
SQSTM1P1-201ENST00000603451 MYCNP04198 464 aaPredicted RBP10.68□□□□□ -0.7
SQSTM1P1-201ENST00000603451 MYL3P08590 195 aa10.68□□□□□ -0.7
SQSTM1P1-201ENST00000603451 MUTP22033 750 aa10.68□□□□□ -0.7
SQSTM1P1-201ENST00000603451 HOXC8P31273 242 aa10.68□□□□□ -0.7
SQSTM1P1-201ENST00000603451 MCM7P33993 719 aa10.68□□□□□ -0.7
SQSTM1P1-201ENST00000603451 CDK7P50613 346 aa10.68□□□□□ -0.7
SQSTM1P1-201ENST00000603451 TOB1P50616 345 aaPredicted RBP10.68□□□□□ -0.7
SQSTM1P1-201ENST00000603451 FXR2P51116 673 aaKnown RBP eCLIP10.68□□□□□ -0.7
SQSTM1P1-201ENST00000603451 ATP2C1P98194 919 aaPredicted RBP10.68□□□□□ -0.7
SQSTM1P1-201ENST00000603451 SPIRE1Q08AE8 756 aa10.68□□□□□ -0.7
SQSTM1P1-201ENST00000603451 ITGA7Q13683 1181 aa10.68□□□□□ -0.7
SQSTM1P1-201ENST00000603451 PDIA5Q14554 519 aa10.68□□□□□ -0.7
SQSTM1P1-201ENST00000603451 HAUS3Q68CZ6 603 aa10.68□□□□□ -0.7
SQSTM1P1-201ENST00000603451 SLC39A5Q6ZMH5 540 aa10.68□□□□□ -0.7
SQSTM1P1-201ENST00000603451 KAT2BQ92831 832 aa10.68□□□□□ -0.7
SQSTM1P1-201ENST00000603451 SENP6Q9GZR1 1112 aaPredicted RBP10.68□□□□□ -0.7
SQSTM1P1-201ENST00000603451 TUT1Q9H6E5 874 aaKnown RBP10.68□□□□□ -0.7
SQSTM1P1-201ENST00000603451 TTC12Q9H892 705 aaPredicted RBP10.68□□□□□ -0.7
SQSTM1P1-201ENST00000603451 DISC1Q9NRI5 854 aa10.68□□□□□ -0.7
SQSTM1P1-201ENST00000603451 PKD2L1Q9P0L9 805 aa10.68□□□□□ -0.7
SQSTM1P1-201ENST00000603451 CIZ1Q9ULV3 898 aaPredicted RBP10.68□□□□□ -0.7
SQSTM1P1-201ENST00000603451 PPME1Q9Y570 386 aa10.68□□□□□ -0.7
SQSTM1P1-201ENST00000603451 TANC1Q9C0D5 1861 aa10.68□□□□□ -0.7
SQSTM1P1-201ENST00000603451 KAT6AQ92794 2004 aa10.67□□□□□ -0.7
SQSTM1P1-201ENST00000603451 NRCAMQ92823 1304 aa10.67□□□□□ -0.7
SQSTM1P1-201ENST00000603451 DCDC2CA8MYV0 355 aa10.67□□□□□ -0.7
SQSTM1P1-201ENST00000603451 BRD1O95696 1058 aa10.67□□□□□ -0.7
SQSTM1P1-201ENST00000603451 F13A1P00488 732 aa10.67□□□□□ -0.7
SQSTM1P1-201ENST00000603451 ZNF286BP0CG31 522 aa10.67□□□□□ -0.7
SQSTM1P1-201ENST00000603451 GNAT1P11488 350 aa10.67□□□□□ -0.7
SQSTM1P1-201ENST00000603451 PSEN2P49810 448 aa10.67□□□□□ -0.7
SQSTM1P1-201ENST00000603451 STAT5BP51692 787 aa10.67□□□□□ -0.7
SQSTM1P1-201ENST00000603451 NUCB2P80303 420 aa10.67□□□□□ -0.7
SQSTM1P1-201ENST00000603451 MFSD10Q14728 455 aa10.67□□□□□ -0.7
SQSTM1P1-201ENST00000603451 KIAA0753Q2KHM9 967 aa10.67□□□□□ -0.7
SQSTM1P1-201ENST00000603451 MIER3Q7Z3K6 550 aa10.67□□□□□ -0.7
SQSTM1P1-201ENST00000603451 ERMNQ8TAM6 284 aa10.67□□□□□ -0.7
SQSTM1P1-201ENST00000603451 GLG1Q92896 1179 aa10.67□□□□□ -0.7
SQSTM1P1-201ENST00000603451 AK8Q96MA6 479 aa10.67□□□□□ -0.7
SQSTM1P1-201ENST00000603451 ZNF396Q96N95 335 aaPredicted RBP10.67□□□□□ -0.7
SQSTM1P1-201ENST00000603451 UNC45AQ9H3U1 944 aa10.67□□□□□ -0.7
SQSTM1P1-201ENST00000603451 ZNF302Q9NR11 478 aa10.67□□□□□ -0.7
SQSTM1P1-201ENST00000603451 FOXD4L1Q9NU39 408 aa10.67□□□□□ -0.7
SQSTM1P1-201ENST00000603451 GTF2IRD1Q9UHL9 959 aa10.67□□□□□ -0.7
SQSTM1P1-201ENST00000603451 SAMM50Q9Y512 469 aa10.67□□□□□ -0.7
SQSTM1P1-201ENST00000603451 PCDHB6Q9Y5E3 794 aa10.67□□□□□ -0.7
SQSTM1P1-201ENST00000603451 MAFBQ9Y5Q3 323 aaPredicted RBP10.67□□□□□ -0.7
SQSTM1P1-201ENST00000603451 ARID2Q68CP9 1835 aa10.67□□□□□ -0.7
SQSTM1P1-201ENST00000603451 LTBP2Q14767 1821 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms