RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 KCTD15Q96SI1 283 aaPredicted RBP5.57□□□□□ -1.52
SPTBN1-206ENST00000602898 SLC26A6Q9BXS9 759 aa5.57□□□□□ -1.52
SPTBN1-206ENST00000602898 MRPL9Q9BYD2 267 aaKnown RBP5.57□□□□□ -1.52
SPTBN1-206ENST00000602898 PDLIM7Q9NR12 457 aa5.57□□□□□ -1.52
SPTBN1-206ENST00000602898 PLA2G2EQ9NZK7 142 aa5.57□□□□□ -1.52
SPTBN1-206ENST00000602898 PRKAG3Q9UGI9 489 aa5.57□□□□□ -1.52
SPTBN1-206ENST00000602898 PLAAQ9Y263 795 aa5.57□□□□□ -1.52
SPTBN1-206ENST00000602898 MYBBP1AQ9BQG0 1328 aaKnown RBP5.57□□□□□ -1.52
SPTBN1-206ENST00000602898 FMN1Q68DA7 1419 aa5.57□□□□□ -1.52
SPTBN1-206ENST00000602898 ADGRB3O60242 1522 aa5.57□□□□□ -1.52
SPTBN1-206ENST00000602898 ARPC4-TTLL3A0A0A6YYG9 625 aa5.57□□□□□ -1.52
SPTBN1-206ENST00000602898 IQCA1LA6NCM1 817 aa5.57□□□□□ -1.52
SPTBN1-206ENST00000602898 A6NNZ2 444 aa5.57□□□□□ -1.52
SPTBN1-206ENST00000602898 SART1O43290 800 aaKnown RBP5.57□□□□□ -1.52
SPTBN1-206ENST00000602898 ALDH1A1P00352 501 aa5.57□□□□□ -1.52
SPTBN1-206ENST00000602898 MT-ND3P03897 115 aa5.57□□□□□ -1.52
SPTBN1-206ENST00000602898 SESN3P58005 492 aa5.57□□□□□ -1.52
SPTBN1-206ENST00000602898 CYP4A11Q02928 519 aa5.57□□□□□ -1.52
SPTBN1-206ENST00000602898 DEUP1Q05D60 604 aa5.57□□□□□ -1.52
SPTBN1-206ENST00000602898 AIMP1Q12904 312 aaKnown RBP5.57□□□□□ -1.52
SPTBN1-206ENST00000602898 PABPC4Q13310 644 aaKnown RBP eCLIP5.57□□□□□ -1.52
SPTBN1-206ENST00000602898 ACAP1Q15027 740 aa5.57□□□□□ -1.52
SPTBN1-206ENST00000602898 WSCD2Q2TBF2 565 aa5.57□□□□□ -1.52
SPTBN1-206ENST00000602898 TNNI3KQ59H18 835 aa5.57□□□□□ -1.52
SPTBN1-206ENST00000602898 WDR44Q5JSH3 913 aa5.57□□□□□ -1.52
SPTBN1-206ENST00000602898 SPATA21Q7Z572 469 aa5.57□□□□□ -1.52
SPTBN1-206ENST00000602898 COLGALT2Q8IYK4 626 aa5.57□□□□□ -1.52
SPTBN1-206ENST00000602898 MIGA1Q8NAN2 632 aa5.57□□□□□ -1.52
SPTBN1-206ENST00000602898 RABGGTAQ92696 567 aa5.57□□□□□ -1.52
SPTBN1-206ENST00000602898 NINJ1Q92982 152 aa5.57□□□□□ -1.52
SPTBN1-206ENST00000602898 NACC2Q96BF6 587 aa5.57□□□□□ -1.52
SPTBN1-206ENST00000602898 SEC16BQ96JE7 1060 aa5.57□□□□□ -1.52
SPTBN1-206ENST00000602898 FAM107BQ9H098 131 aa5.57□□□□□ -1.52
SPTBN1-206ENST00000602898 HPS4Q9NQG7 708 aa5.57□□□□□ -1.52
SPTBN1-206ENST00000602898 PRDM11Q9NQV5 511 aa5.57□□□□□ -1.52
SPTBN1-206ENST00000602898 SCAF11Q99590 1463 aaKnown RBP5.57□□□□□ -1.52
SPTBN1-206ENST00000602898 ARHGEF5Q12774 1597 aa5.56□□□□□ -1.52
SPTBN1-206ENST00000602898 A0A087WUV0 522 aaPredicted RBP5.56□□□□□ -1.52
SPTBN1-206ENST00000602898 A6NHS1 94 aa5.56□□□□□ -1.52
SPTBN1-206ENST00000602898 NCAM2O15394 837 aa5.56□□□□□ -1.52
SPTBN1-206ENST00000602898 FOXD2O60548 495 aaPredicted RBP5.56□□□□□ -1.52
SPTBN1-206ENST00000602898 HSPA4LO95757 839 aa5.56□□□□□ -1.52
SPTBN1-206ENST00000602898 PAHP00439 452 aa5.56□□□□□ -1.52
SPTBN1-206ENST00000602898 ASGR2P07307 311 aa5.56□□□□□ -1.52
SPTBN1-206ENST00000602898 TPP2P29144 1249 aaPredicted RBP5.56□□□□□ -1.52
SPTBN1-206ENST00000602898 ACTN2P35609 894 aa5.56□□□□□ -1.52
SPTBN1-206ENST00000602898 IARSP41252 1262 aaKnown RBP5.56□□□□□ -1.52
SPTBN1-206ENST00000602898 GRM5P41594 1212 aa5.56□□□□□ -1.52
SPTBN1-206ENST00000602898 NPTX2P47972 431 aa5.56□□□□□ -1.52
SPTBN1-206ENST00000602898 AKAP17AQ02040 695 aaKnown RBP5.56□□□□□ -1.52
SPTBN1-206ENST00000602898 SSRP1Q08945 709 aaKnown RBP5.56□□□□□ -1.52
SPTBN1-206ENST00000602898 FAPQ12884 760 aa5.56□□□□□ -1.52
SPTBN1-206ENST00000602898 PRPF4BQ13523 1007 aaKnown RBP5.56□□□□□ -1.52
SPTBN1-206ENST00000602898 SLC14A2Q15849 920 aa5.56□□□□□ -1.52
SPTBN1-206ENST00000602898 METTL24Q5JXM2 366 aa5.56□□□□□ -1.52
SPTBN1-206ENST00000602898 TADA2BQ86TJ2 420 aa5.56□□□□□ -1.52
SPTBN1-206ENST00000602898 PHTF2Q8N3S3 785 aa5.56□□□□□ -1.52
SPTBN1-206ENST00000602898 TEX9Q8N6V9 391 aa5.56□□□□□ -1.52
SPTBN1-206ENST00000602898 UTP15Q8TED0 518 aaKnown RBP5.56□□□□□ -1.52
SPTBN1-206ENST00000602898 TBC1D5Q92609 795 aa5.56□□□□□ -1.52
SPTBN1-206ENST00000602898 EXOC4Q96A65 974 aa5.56□□□□□ -1.52
SPTBN1-206ENST00000602898 MOGAT1Q96PD6 335 aa5.56□□□□□ -1.52
SPTBN1-206ENST00000602898 PICK1Q9NRD5 415 aa5.56□□□□□ -1.52
SPTBN1-206ENST00000602898 HOMER3Q9NSC5 361 aa5.56□□□□□ -1.52
SPTBN1-206ENST00000602898 TTLL3Q9Y4R7 772 aa5.56□□□□□ -1.52
SPTBN1-206ENST00000602898 FAM83GA6ND36 823 aa5.56□□□□□ -1.52
SPTBN1-206ENST00000602898 LRRC72A6NJI9 287 aa5.56□□□□□ -1.52
SPTBN1-206ENST00000602898 BTBD11A6QL63 1104 aa5.56□□□□□ -1.52
SPTBN1-206ENST00000602898 F8VZ95 297 aa5.56□□□□□ -1.52
SPTBN1-206ENST00000602898 LRP6O75581 1613 aa5.56□□□□□ -1.52
SPTBN1-206ENST00000602898 TBX18O95935 607 aa5.56□□□□□ -1.52
SPTBN1-206ENST00000602898 DESP17661 470 aa5.56□□□□□ -1.52
SPTBN1-206ENST00000602898 PBLDP30039 288 aaPredicted RBP5.56□□□□□ -1.52
SPTBN1-206ENST00000602898 SKIV2L2P42285 1042 aaKnown RBP5.56□□□□□ -1.52
SPTBN1-206ENST00000602898 MXI1P50539 228 aa5.56□□□□□ -1.52
SPTBN1-206ENST00000602898 YARSP54577 528 aaKnown RBP5.56□□□□□ -1.52
SPTBN1-206ENST00000602898 CHD4Q14839 1912 aa5.56□□□□□ -1.52
SPTBN1-206ENST00000602898 LLGL1Q15334 1064 aa5.56□□□□□ -1.52
SPTBN1-206ENST00000602898 SF3B3Q15393 1217 aaKnown RBP5.56□□□□□ -1.52
SPTBN1-206ENST00000602898 DBN1Q16643 649 aa5.56□□□□□ -1.52
SPTBN1-206ENST00000602898 KIAA0319Q5VV43 1072 aa5.56□□□□□ -1.52
SPTBN1-206ENST00000602898 TRAF7Q6Q0C0 670 aa5.56□□□□□ -1.52
SPTBN1-206ENST00000602898 LRSAM1Q6UWE0 723 aa5.56□□□□□ -1.52
SPTBN1-206ENST00000602898 ZER1Q7Z7L7 766 aa5.56□□□□□ -1.52
SPTBN1-206ENST00000602898 C2orf69Q8N8R5 385 aa5.56□□□□□ -1.52
SPTBN1-206ENST00000602898 ZNF784Q8NCA9 323 aaPredicted RBP5.56□□□□□ -1.52
SPTBN1-206ENST00000602898 MSANTD4Q8NCY6 345 aa5.56□□□□□ -1.52
SPTBN1-206ENST00000602898 CTCFLQ8NI51 663 aaPredicted RBP5.56□□□□□ -1.52
SPTBN1-206ENST00000602898 KIAA1524Q8TCG1 905 aa5.56□□□□□ -1.52
SPTBN1-206ENST00000602898 TNRQ92752 1358 aa5.56□□□□□ -1.52
SPTBN1-206ENST00000602898 ARHGEF2Q92974 986 aaKnown RBP5.56□□□□□ -1.52
SPTBN1-206ENST00000602898 CEP95Q96GE4 821 aa5.56□□□□□ -1.52
SPTBN1-206ENST00000602898 DHRS1Q96LJ7 313 aa5.56□□□□□ -1.52
SPTBN1-206ENST00000602898 FAM129BQ96TA1 746 aa5.56□□□□□ -1.52
SPTBN1-206ENST00000602898 KIF15Q9NS87 1388 aa5.56□□□□□ -1.52
SPTBN1-206ENST00000602898 DOLKQ9UPQ8 538 aa5.56□□□□□ -1.52
SPTBN1-206ENST00000602898 ARHGAP5Q13017 1502 aa5.55□□□□□ -1.52
SPTBN1-206ENST00000602898 RGS12O14924 1447 aa5.55□□□□□ -1.52
SPTBN1-206ENST00000602898 ROCK1Q13464 1354 aa5.55□□□□□ -1.52
SPTBN1-206ENST00000602898 PLEKHH1Q9ULM0 1364 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms