RNA–Protein interactions for RNA: ENST00000602308.1

TRIM11-205, Transcript of tripartite motif containing 11, humanhuman

TSL 3

Gene TRIM11, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-205ENST00000602308 ADRB1P08588 477 aa16.89■□□□□ 0.29
TRIM11-205ENST00000602308 GHRP10912 638 aa16.89■□□□□ 0.29
TRIM11-205ENST00000602308 STXBP2Q15833 593 aa16.89■□□□□ 0.29
TRIM11-205ENST00000602308 PAN2Q504Q3 1202 aaKnown RBP16.89■□□□□ 0.29
TRIM11-205ENST00000602308 MYSM1Q5VVJ2 828 aa16.89■□□□□ 0.29
TRIM11-205ENST00000602308 RIN2Q8WYP3 895 aaPredicted RBP16.89■□□□□ 0.29
TRIM11-205ENST00000602308 FRAT1Q92837 279 aaPredicted RBP16.89■□□□□ 0.29
TRIM11-205ENST00000602308 CHAMP1Q96JM3 812 aa16.89■□□□□ 0.29
TRIM11-205ENST00000602308 EHMT1Q9H9B1 1298 aa16.89■□□□□ 0.29
TRIM11-205ENST00000602308 COL20A1Q9P218 1284 aa16.89■□□□□ 0.29
TRIM11-205ENST00000602308 PLXNA4Q9HCM2 1894 aa16.88■□□□□ 0.29
TRIM11-205ENST00000602308 FSD2A1L4K1 749 aa16.88■□□□□ 0.29
TRIM11-205ENST00000602308 LLGL2Q6P1M3 1020 aa16.88■□□□□ 0.29
TRIM11-205ENST00000602308 DCAF4Q8WV16 495 aa16.88■□□□□ 0.29
TRIM11-205ENST00000602308 LINC01599Q8WXQ3 324 aa16.88■□□□□ 0.29
TRIM11-205ENST00000602308 MRVI1Q9Y6F6 885 aa16.88■□□□□ 0.29
TRIM11-205ENST00000602308 ANKRD11Q6UB99 2663 aaPredicted RBP16.87■□□□□ 0.29
TRIM11-205ENST00000602308 DCDC2BA2VCK2 349 aa16.87■□□□□ 0.29
TRIM11-205ENST00000602308 IFIT2P09913 472 aaKnown RBP16.87■□□□□ 0.29
TRIM11-205ENST00000602308 SRGAP2BP0DMP2 458 aa16.87■□□□□ 0.29
TRIM11-205ENST00000602308 HOXB8P17481 243 aaPredicted RBP16.87■□□□□ 0.29
TRIM11-205ENST00000602308 TDO2P48775 406 aa16.87■□□□□ 0.29
TRIM11-205ENST00000602308 LPIN1Q14693 890 aa16.87■□□□□ 0.29
TRIM11-205ENST00000602308 CEP85Q6P2H3 762 aa16.87■□□□□ 0.29
TRIM11-205ENST00000602308 CLASRPQ8N2M8 674 aaKnown RBP16.87■□□□□ 0.29
TRIM11-205ENST00000602308 SUMF1Q8NBK3 374 aa16.87■□□□□ 0.29
TRIM11-205ENST00000602308 RGS22Q8NE09 1264 aa16.87■□□□□ 0.29
TRIM11-205ENST00000602308 RASGRP4Q8TDF6 673 aa16.87■□□□□ 0.29
TRIM11-205ENST00000602308 SYTL5Q8TDW5 730 aaPredicted RBP16.87■□□□□ 0.29
TRIM11-205ENST00000602308 NSUN6Q8TEA1 469 aaKnown RBP16.87■□□□□ 0.29
TRIM11-205ENST00000602308 SPATA33Q96N06 139 aa16.87■□□□□ 0.29
TRIM11-205ENST00000602308 BCL11AQ9H165 835 aa16.87■□□□□ 0.29
TRIM11-205ENST00000602308 ERVK-5Q9HDB9 667 aa16.87■□□□□ 0.29
TRIM11-205ENST00000602308 GPCPD1Q9NPB8 672 aa16.87■□□□□ 0.29
TRIM11-205ENST00000602308 KIAA1217Q5T5P2 1943 aa16.87■□□□□ 0.29
TRIM11-205ENST00000602308 FRMPD2Q68DX3 1309 aaPredicted RBP16.87■□□□□ 0.29
TRIM11-205ENST00000602308 H3BRB1 525 aa16.86■□□□□ 0.29
TRIM11-205ENST00000602308 FSCN2O14926 492 aa16.86■□□□□ 0.29
TRIM11-205ENST00000602308 ATP5JP18859 108 aa16.86■□□□□ 0.29
TRIM11-205ENST00000602308 GATMP50440 423 aa16.86■□□□□ 0.29
TRIM11-205ENST00000602308 UBE3AQ05086 875 aa16.86■□□□□ 0.29
TRIM11-205ENST00000602308 ZSCAN25Q6NSZ9 544 aa16.86■□□□□ 0.29
TRIM11-205ENST00000602308 RTN4RL1Q86UN2 441 aaPredicted RBP16.86■□□□□ 0.29
TRIM11-205ENST00000602308 ZDHHC14Q8IZN3 488 aa16.86■□□□□ 0.29
TRIM11-205ENST00000602308 OSBP2Q969R2 916 aa16.86■□□□□ 0.29
TRIM11-205ENST00000602308 IWS1Q96ST2 819 aa16.86■□□□□ 0.29
TRIM11-205ENST00000602308 TUT1Q9H6E5 874 aaKnown RBP16.86■□□□□ 0.29
TRIM11-205ENST00000602308 SETD4Q9NVD3 440 aa16.86■□□□□ 0.29
TRIM11-205ENST00000602308 SUPT16HQ9Y5B9 1047 aaKnown RBP16.86■□□□□ 0.29
TRIM11-205ENST00000602308 MYH7BA7E2Y1 1941 aa16.86■□□□□ 0.29
TRIM11-205ENST00000602308 SDHBP21912 280 aa16.85■□□□□ 0.29
TRIM11-205ENST00000602308 CELF3Q5SZQ8 465 aaKnown RBP16.85■□□□□ 0.29
TRIM11-205ENST00000602308 NECTIN4Q96NY8 510 aa16.85■□□□□ 0.29
TRIM11-205ENST00000602308 WDR19Q8NEZ3 1342 aa16.85■□□□□ 0.29
TRIM11-205ENST00000602308 MYH7P12883 1935 aa16.84■□□□□ 0.29
TRIM11-205ENST00000602308 EIF3JO75822 258 aaKnown RBP16.84■□□□□ 0.29
TRIM11-205ENST00000602308 WEE2P0C1S8 567 aa16.84■□□□□ 0.29
TRIM11-205ENST00000602308 NOVP48745 357 aa16.84■□□□□ 0.29
TRIM11-205ENST00000602308 ADAM17P78536 824 aa16.84■□□□□ 0.29
TRIM11-205ENST00000602308 MGAT3Q09327 533 aa16.84■□□□□ 0.29
TRIM11-205ENST00000602308 USH1GQ495M9 461 aa16.84■□□□□ 0.29
TRIM11-205ENST00000602308 PPP4R3BQ5MIZ7 849 aa16.84■□□□□ 0.29
TRIM11-205ENST00000602308 IFNL3Q8IZI9 196 aa16.84■□□□□ 0.29
TRIM11-205ENST00000602308 SIX5Q8N196 739 aa16.84■□□□□ 0.29
TRIM11-205ENST00000602308 RMDN3Q96TC7 470 aa16.84■□□□□ 0.29
TRIM11-205ENST00000602308 ADAM7Q9H2U9 754 aa16.84■□□□□ 0.29
TRIM11-205ENST00000602308 PNMA2Q9UL42 364 aa16.84■□□□□ 0.29
TRIM11-205ENST00000602308 ASPMQ8IZT6 3477 aa16.83■□□□□ 0.29
TRIM11-205ENST00000602308 GPAA1O43292 621 aa16.83■□□□□ 0.28
TRIM11-205ENST00000602308 GGPS1O95749 300 aa16.83■□□□□ 0.28
TRIM11-205ENST00000602308 APPP05067 770 aa16.83■□□□□ 0.28
TRIM11-205ENST00000602308 LGALS2P05162 132 aa16.83■□□□□ 0.28
TRIM11-205ENST00000602308 SP9P0CG40 484 aa16.83■□□□□ 0.28
TRIM11-205ENST00000602308 SP2Q02086 613 aa16.83■□□□□ 0.28
TRIM11-205ENST00000602308 APOBRQ0VD83 1088 aa16.83■□□□□ 0.28
TRIM11-205ENST00000602308 PLPP4Q5VZY2 271 aa16.83■□□□□ 0.28
TRIM11-205ENST00000602308 ZC3H14Q6PJT7 736 aaKnown RBP16.83■□□□□ 0.28
TRIM11-205ENST00000602308 TDRD5Q8NAT2 981 aaKnown RBP16.83■□□□□ 0.28
TRIM11-205ENST00000602308 SH2B1Q9NRF2 756 aaPredicted RBP16.83■□□□□ 0.28
TRIM11-205ENST00000602308 HIDE1A8MVS5 230 aa16.82■□□□□ 0.28
TRIM11-205ENST00000602308 FGF18O76093 207 aa16.82■□□□□ 0.28
TRIM11-205ENST00000602308 NR3C2P08235 984 aa16.82■□□□□ 0.28
TRIM11-205ENST00000602308 EIF2AK2P19525 551 aaKnown RBP16.82■□□□□ 0.28
TRIM11-205ENST00000602308 COL9A3Q14050 684 aaPredicted RBP16.82■□□□□ 0.28
TRIM11-205ENST00000602308 PDE12Q6L8Q7 609 aaKnown RBP16.82■□□□□ 0.28
TRIM11-205ENST00000602308 CES5AQ6NT32 575 aa16.82■□□□□ 0.28
TRIM11-205ENST00000602308 NPAS4Q8IUM7 802 aa16.82■□□□□ 0.28
TRIM11-205ENST00000602308 TMEM260Q9NX78 707 aa16.82■□□□□ 0.28
TRIM11-205ENST00000602308 PCDHB12Q9Y5F1 795 aa16.82■□□□□ 0.28
TRIM11-205ENST00000602308 FANCMQ8IYD8 2048 aa16.82■□□□□ 0.28
TRIM11-205ENST00000602308 TSPY2A6NKD2 308 aa16.81■□□□□ 0.28
TRIM11-205ENST00000602308 GNAT1P11488 350 aa16.81■□□□□ 0.28
TRIM11-205ENST00000602308 ITIH3Q06033 890 aa16.81■□□□□ 0.28
TRIM11-205ENST00000602308 PPARAQ07869 468 aa16.81■□□□□ 0.28
TRIM11-205ENST00000602308 HSP90AB4PQ58FF6 505 aa16.81■□□□□ 0.28
TRIM11-205ENST00000602308 FBXO47Q5MNV8 452 aa16.81■□□□□ 0.28
TRIM11-205ENST00000602308 ARHGEF16Q5VV41 709 aa16.81■□□□□ 0.28
TRIM11-205ENST00000602308 RUFY4Q6ZNE9 571 aa16.81■□□□□ 0.28
TRIM11-205ENST00000602308 PLCD3Q8N3E9 789 aa16.81■□□□□ 0.28
TRIM11-205ENST00000602308 LMBR1Q8WVP7 490 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms