RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 EFCC1Q9HA90 598 aa13.06□□□□□ -0.32
VRK3-223ENST00000601341 DISC1Q9NRI5 854 aa13.06□□□□□ -0.32
VRK3-223ENST00000601341 CGNQ9P2M7 1197 aaKnown RBP13.06□□□□□ -0.32
VRK3-223ENST00000601341 SERTAD1Q9UHV2 236 aa13.06□□□□□ -0.32
VRK3-223ENST00000601341 STK24Q9Y6E0 443 aa13.06□□□□□ -0.32
VRK3-223ENST00000601341 IPO5O00410 1097 aaKnown RBP13.05□□□□□ -0.32
VRK3-223ENST00000601341 SLC26A4O43511 780 aa13.05□□□□□ -0.32
VRK3-223ENST00000601341 STRNO43815 780 aa13.05□□□□□ -0.32
VRK3-223ENST00000601341 GAS7O60861 476 aa13.05□□□□□ -0.32
VRK3-223ENST00000601341 ATP1A3P13637 1013 aa13.05□□□□□ -0.32
VRK3-223ENST00000601341 STAT6P42226 847 aa13.05□□□□□ -0.32
VRK3-223ENST00000601341 TM4SF4P48230 202 aa13.05□□□□□ -0.32
VRK3-223ENST00000601341 ALDH5A1P51649 535 aaPredicted RBP13.05□□□□□ -0.32
VRK3-223ENST00000601341 NCBP1Q09161 790 aaKnown RBP13.05□□□□□ -0.32
VRK3-223ENST00000601341 TBX2Q13207 712 aaPredicted RBP13.05□□□□□ -0.32
VRK3-223ENST00000601341 STXBP2Q15833 593 aa13.05□□□□□ -0.32
VRK3-223ENST00000601341 LRCH2Q5VUJ6 765 aa13.05□□□□□ -0.32
VRK3-223ENST00000601341 NLRX1Q86UT6 975 aa13.05□□□□□ -0.32
VRK3-223ENST00000601341 GPRASP2Q96D09 838 aa13.05□□□□□ -0.32
VRK3-223ENST00000601341 ERO1AQ96HE7 468 aa13.05□□□□□ -0.32
VRK3-223ENST00000601341 PPP1R13BQ96KQ4 1090 aa13.05□□□□□ -0.32
VRK3-223ENST00000601341 WDR11Q9BZH6 1224 aa13.05□□□□□ -0.32
VRK3-223ENST00000601341 R3HDMLQ9H3Y0 253 aa13.05□□□□□ -0.32
VRK3-223ENST00000601341 CREBZFQ9NS37 354 aa13.05□□□□□ -0.32
VRK3-223ENST00000601341 FANCLQ9NW38 375 aa13.05□□□□□ -0.32
VRK3-223ENST00000601341 IVNS1ABPQ9Y6Y0 642 aa13.05□□□□□ -0.32
VRK3-223ENST00000601341 DNAJC25-GNG10A0A024R161 153 aa13.04□□□□□ -0.32
VRK3-223ENST00000601341 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.04□□□□□ -0.32
VRK3-223ENST00000601341 USP27XA6NNY8 438 aa13.04□□□□□ -0.32
VRK3-223ENST00000601341 ARHGAP6O43182 974 aa13.04□□□□□ -0.32
VRK3-223ENST00000601341 STX10O60499 249 aa13.04□□□□□ -0.32
VRK3-223ENST00000601341 PSMD10O75832 226 aa13.04□□□□□ -0.32
VRK3-223ENST00000601341 MAPK4P31152 587 aa13.04□□□□□ -0.32
VRK3-223ENST00000601341 APLP1P51693 650 aa13.04□□□□□ -0.32
VRK3-223ENST00000601341 SPIRE1Q08AE8 756 aa13.04□□□□□ -0.32
VRK3-223ENST00000601341 NOGQ13253 232 aa13.04□□□□□ -0.32
VRK3-223ENST00000601341 GRM1Q13255 1194 aa13.04□□□□□ -0.32
VRK3-223ENST00000601341 E2F4Q16254 413 aa13.04□□□□□ -0.32
VRK3-223ENST00000601341 GNPTABQ3T906 1256 aa13.04□□□□□ -0.32
VRK3-223ENST00000601341 OTOP1Q7RTM1 612 aa13.04□□□□□ -0.32
VRK3-223ENST00000601341 ABRAQ8N0Z2 381 aa13.04□□□□□ -0.32
VRK3-223ENST00000601341 ERMNQ8TAM6 284 aa13.04□□□□□ -0.32
VRK3-223ENST00000601341 SNX29Q8TEQ0 813 aa13.04□□□□□ -0.32
VRK3-223ENST00000601341 CDK5RAP3Q96JB5 506 aa13.04□□□□□ -0.32
VRK3-223ENST00000601341 CDHR1Q96JP9 859 aa13.04□□□□□ -0.32
VRK3-223ENST00000601341 INPP4AQ96PE3 977 aaPredicted RBP13.04□□□□□ -0.32
VRK3-223ENST00000601341 MMTAG2Q9BU76 263 aaKnown RBP13.04□□□□□ -0.32
VRK3-223ENST00000601341 CUEDC2Q9H467 287 aa13.04□□□□□ -0.32
VRK3-223ENST00000601341 ZFYVE28Q9HCC9 887 aa13.04□□□□□ -0.32
VRK3-223ENST00000601341 VAV3Q9UKW4 847 aa13.04□□□□□ -0.32
VRK3-223ENST00000601341 PHLPP2Q6ZVD8 1323 aa13.04□□□□□ -0.32
VRK3-223ENST00000601341 LOC102724159A0A0B4J2E5 919 aa13.04□□□□□ -0.32
VRK3-223ENST00000601341 SOWAHBA6NEL2 793 aa13.04□□□□□ -0.32
VRK3-223ENST00000601341 RASSF10A6NK89 507 aa13.04□□□□□ -0.32
VRK3-223ENST00000601341 ZSCAN12O43309 604 aa13.04□□□□□ -0.32
VRK3-223ENST00000601341 TLR2O60603 784 aa13.04□□□□□ -0.32
VRK3-223ENST00000601341 EIF3JO75822 258 aaKnown RBP13.04□□□□□ -0.32
VRK3-223ENST00000601341 PGK2P07205 417 aa13.04□□□□□ -0.32
VRK3-223ENST00000601341 PPP2R5CQ13362 524 aa13.04□□□□□ -0.32
VRK3-223ENST00000601341 PWP2Q15269 919 aaKnown RBP13.04□□□□□ -0.32
VRK3-223ENST00000601341 DEFB115Q30KQ5 88 aa13.04□□□□□ -0.32
VRK3-223ENST00000601341 HAUS3Q68CZ6 603 aa13.04□□□□□ -0.32
VRK3-223ENST00000601341 CYP4F22Q6NT55 531 aa13.04□□□□□ -0.32
VRK3-223ENST00000601341 CTAGE1Q96RT6 745 aa13.04□□□□□ -0.32
VRK3-223ENST00000601341 TEKT3Q9BXF9 490 aa13.04□□□□□ -0.32
VRK3-223ENST00000601341 AGO4Q9HCK5 861 aaKnown RBP13.04□□□□□ -0.32
VRK3-223ENST00000601341 TBC1D22BQ9NU19 505 aa13.04□□□□□ -0.32
VRK3-223ENST00000601341 CPA4Q9UI42 421 aa13.04□□□□□ -0.32
VRK3-223ENST00000601341 NFE2L3Q9Y4A8 694 aa13.04□□□□□ -0.32
VRK3-223ENST00000601341 PLCG1P19174 1290 aa13.03□□□□□ -0.32
VRK3-223ENST00000601341 EDNRBP24530 442 aa13.03□□□□□ -0.32
VRK3-223ENST00000601341 CCT6AP40227 531 aaKnown RBP13.03□□□□□ -0.32
VRK3-223ENST00000601341 ETF1P62495 437 aaKnown RBP13.03□□□□□ -0.32
VRK3-223ENST00000601341 PDE4DQ08499 809 aa13.03□□□□□ -0.32
VRK3-223ENST00000601341 SPECC1LQ69YQ0 1117 aa13.03□□□□□ -0.32
VRK3-223ENST00000601341 NCAPH2Q6IBW4 605 aa13.03□□□□□ -0.32
VRK3-223ENST00000601341 SRRTQ9BXP5 876 aaKnown RBP13.03□□□□□ -0.32
VRK3-223ENST00000601341 NT5C3AQ9H0P0 336 aa13.03□□□□□ -0.32
VRK3-223ENST00000601341 MAGEF1Q9HAY2 307 aa13.03□□□□□ -0.32
VRK3-223ENST00000601341 ASTN1O14525 1302 aa13.03□□□□□ -0.32
VRK3-223ENST00000601341 ADGRA2Q96PE1 1338 aa13.03□□□□□ -0.32
VRK3-223ENST00000601341 KDM3AQ9Y4C1 1321 aa13.03□□□□□ -0.32
VRK3-223ENST00000601341 SLU7O95391 586 aaKnown RBP13.02□□□□□ -0.32
VRK3-223ENST00000601341 ALDH1A1P00352 501 aa13.02□□□□□ -0.32
VRK3-223ENST00000601341 GRB10Q13322 594 aa13.02□□□□□ -0.32
VRK3-223ENST00000601341 NAALADL2Q58DX5 795 aa13.02□□□□□ -0.32
VRK3-223ENST00000601341 SPATA1Q5VX52 437 aa13.02□□□□□ -0.32
VRK3-223ENST00000601341 PDXDC2PQ6P474 469 aa13.02□□□□□ -0.32
VRK3-223ENST00000601341 GPR142Q7Z601 462 aa13.02□□□□□ -0.32
VRK3-223ENST00000601341 PLEKHH3Q7Z736 793 aa13.02□□□□□ -0.32
VRK3-223ENST00000601341 REM2Q8IYK8 340 aaPredicted RBP13.02□□□□□ -0.32
VRK3-223ENST00000601341 PAGE5Q96GU1 130 aa13.02□□□□□ -0.32
VRK3-223ENST00000601341 PLIN2Q99541 437 aa13.02□□□□□ -0.32
VRK3-223ENST00000601341 STK17AQ9UEE5 414 aa13.02□□□□□ -0.32
VRK3-223ENST00000601341 A0A1B0GTH6 734 aa13.02□□□□□ -0.33
VRK3-223ENST00000601341 DHX15O43143 795 aaKnown RBP13.02□□□□□ -0.33
VRK3-223ENST00000601341 RGS20O76081 388 aa13.02□□□□□ -0.33
VRK3-223ENST00000601341 MYL1P05976 194 aa13.02□□□□□ -0.33
VRK3-223ENST00000601341 RPA1P27694 616 aa13.02□□□□□ -0.33
VRK3-223ENST00000601341 ADORA2AP29274 412 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms