RNA–Protein interactions for RNA: ENST00000600791.5

SHKBP1-226, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 494 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-226ENST00000600791 GJB5O95377 273 aa17.22■□□□□ 0.35
SHKBP1-226ENST00000600791 CTSHP09668 335 aa17.22■□□□□ 0.35
SHKBP1-226ENST00000600791 GNAT1P11488 350 aa17.22■□□□□ 0.35
SHKBP1-226ENST00000600791 CPA1P15085 419 aa17.22■□□□□ 0.35
SHKBP1-226ENST00000600791 CDC27P30260 824 aa17.22■□□□□ 0.35
SHKBP1-226ENST00000600791 RCAN1P53805 252 aa17.22■□□□□ 0.35
SHKBP1-226ENST00000600791 ADAM17P78536 824 aa17.22■□□□□ 0.35
SHKBP1-226ENST00000600791 ARHGAP4P98171 946 aa17.22■□□□□ 0.35
SHKBP1-226ENST00000600791 MKRN4PQ13434 485 aaPredicted RBP17.22■□□□□ 0.35
SHKBP1-226ENST00000600791 TJAP1Q5JTD0 557 aa17.22■□□□□ 0.35
SHKBP1-226ENST00000600791 MICALL1Q8N3F8 863 aa17.22■□□□□ 0.35
SHKBP1-226ENST00000600791 DBF4BQ8NFT6 615 aa17.22■□□□□ 0.35
SHKBP1-226ENST00000600791 ARNTL2Q8WYA1 636 aa17.22■□□□□ 0.35
SHKBP1-226ENST00000600791 KCNB2Q92953 911 aa17.22■□□□□ 0.35
SHKBP1-226ENST00000600791 CCDC136Q96JN2 1154 aa17.22■□□□□ 0.35
SHKBP1-226ENST00000600791 PGBD1Q96JS3 809 aa17.22■□□□□ 0.35
SHKBP1-226ENST00000600791 ZBED2Q9BTP6 218 aa17.22■□□□□ 0.35
SHKBP1-226ENST00000600791 EHMT1Q9H9B1 1298 aa17.22■□□□□ 0.35
SHKBP1-226ENST00000600791 RIC8AQ9NPQ8 531 aa17.22■□□□□ 0.35
SHKBP1-226ENST00000600791 FAM217BQ9NTX9 383 aaPredicted RBP17.22■□□□□ 0.35
SHKBP1-226ENST00000600791 THEGQ9P2T0 379 aa17.22■□□□□ 0.35
SHKBP1-226ENST00000600791 V9GY48 417 aaPredicted RBP17.22■□□□□ 0.35
SHKBP1-226ENST00000600791 GSTTP1A0A1W2PQM5 241 aa17.21■□□□□ 0.35
SHKBP1-226ENST00000600791 hCG_1984214I3L0E3 225 aa17.21■□□□□ 0.35
SHKBP1-226ENST00000600791 STXBP3O00186 592 aa17.21■□□□□ 0.35
SHKBP1-226ENST00000600791 ADCY7P51828 1080 aa17.21■□□□□ 0.35
SHKBP1-226ENST00000600791 PLEKHG4Q58EX7 1191 aa17.21■□□□□ 0.35
SHKBP1-226ENST00000600791 ZNF713Q8N859 430 aaPredicted RBP17.21■□□□□ 0.35
SHKBP1-226ENST00000600791 SEPT1Q8WYJ6 367 aa17.21■□□□□ 0.35
SHKBP1-226ENST00000600791 BARHL2Q9NY43 387 aa17.21■□□□□ 0.35
SHKBP1-226ENST00000600791 KAT6AQ92794 2004 aa17.21■□□□□ 0.35
SHKBP1-226ENST00000600791 NRCAMQ92823 1304 aa17.21■□□□□ 0.34
SHKBP1-226ENST00000600791 MAFGO15525 162 aa17.2■□□□□ 0.34
SHKBP1-226ENST00000600791 POU3F3P20264 500 aaPredicted RBP17.2■□□□□ 0.34
SHKBP1-226ENST00000600791 HSPA4P34932 840 aa17.2■□□□□ 0.34
SHKBP1-226ENST00000600791 FGD1P98174 961 aa17.2■□□□□ 0.34
SHKBP1-226ENST00000600791 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.2■□□□□ 0.34
SHKBP1-226ENST00000600791 TEX2Q8IWB9 1127 aa17.2■□□□□ 0.34
SHKBP1-226ENST00000600791 CYP2W1Q8TAV3 490 aa17.2■□□□□ 0.34
SHKBP1-226ENST00000600791 ATXN2LQ8WWM7 1075 aaKnown RBP17.2■□□□□ 0.34
SHKBP1-226ENST00000600791 SYMPKQ92797 1274 aaKnown RBP17.2■□□□□ 0.34
SHKBP1-226ENST00000600791 JAKMIP1Q96N16 626 aaKnown RBP17.2■□□□□ 0.34
SHKBP1-226ENST00000600791 RAD9AQ99638 391 aa17.2■□□□□ 0.34
SHKBP1-226ENST00000600791 MXRA8Q9BRK3 442 aa17.2■□□□□ 0.34
SHKBP1-226ENST00000600791 OSBPL7Q9BZF2 842 aa17.2■□□□□ 0.34
SHKBP1-226ENST00000600791 KCNH7Q9NS40 1196 aa17.2■□□□□ 0.34
SHKBP1-226ENST00000600791 NAP1L2Q9ULW6 460 aaPredicted RBP17.2■□□□□ 0.34
SHKBP1-226ENST00000600791 SNX14Q9Y5W7 946 aa17.2■□□□□ 0.34
SHKBP1-226ENST00000600791 MTCH2Q9Y6C9 303 aa17.2■□□□□ 0.34
SHKBP1-226ENST00000600791 SIP14410 1827 aa17.19■□□□□ 0.34
SHKBP1-226ENST00000600791 SMCO2A6NFE2 343 aa17.19■□□□□ 0.34
SHKBP1-226ENST00000600791 GTPBP6O43824 516 aaPredicted RBP17.19■□□□□ 0.34
SHKBP1-226ENST00000600791 FOSP01100 380 aaPredicted RBP17.19■□□□□ 0.34
SHKBP1-226ENST00000600791 MARK3P27448 753 aa17.19■□□□□ 0.34
SHKBP1-226ENST00000600791 METAP2P50579 478 aaKnown RBP eCLIP17.19■□□□□ 0.34
SHKBP1-226ENST00000600791 APOBRQ0VD83 1088 aa17.19■□□□□ 0.34
SHKBP1-226ENST00000600791 KRT40Q6A162 431 aa17.19■□□□□ 0.34
SHKBP1-226ENST00000600791 FAM117BQ6P1L5 589 aa17.19■□□□□ 0.34
SHKBP1-226ENST00000600791 Q6ZUG5 572 aa17.19■□□□□ 0.34
SHKBP1-226ENST00000600791 BRF1Q92994 677 aa17.19■□□□□ 0.34
SHKBP1-226ENST00000600791 ANO3Q9BYT9 981 aa17.19■□□□□ 0.34
SHKBP1-226ENST00000600791 JPH1Q9HDC5 661 aaPredicted RBP17.19■□□□□ 0.34
SHKBP1-226ENST00000600791 TMEM260Q9NX78 707 aa17.19■□□□□ 0.34
SHKBP1-226ENST00000600791 ERAP1Q9NZ08 941 aa17.19■□□□□ 0.34
SHKBP1-226ENST00000600791 NID2Q14112 1375 aa17.18■□□□□ 0.34
SHKBP1-226ENST00000600791 NCOR1O75376 2440 aa17.18■□□□□ 0.34
SHKBP1-226ENST00000600791 AMHP03971 560 aa17.18■□□□□ 0.34
SHKBP1-226ENST00000600791 ADD1P35611 737 aaKnown RBP17.18■□□□□ 0.34
SHKBP1-226ENST00000600791 CLK2P49760 499 aaKnown RBP17.18■□□□□ 0.34
SHKBP1-226ENST00000600791 PPFIA1Q13136 1202 aa17.18■□□□□ 0.34
SHKBP1-226ENST00000600791 GRB10Q13322 594 aa17.18■□□□□ 0.34
SHKBP1-226ENST00000600791 AP3B2Q13367 1082 aa17.18■□□□□ 0.34
SHKBP1-226ENST00000600791 BLOC1S2Q6QNY1 142 aa17.18■□□□□ 0.34
SHKBP1-226ENST00000600791 RUFY4Q6ZNE9 571 aa17.18■□□□□ 0.34
SHKBP1-226ENST00000600791 MYOCDQ8IZQ8 938 aa17.18■□□□□ 0.34
SHKBP1-226ENST00000600791 SEPT8Q92599 483 aa17.18■□□□□ 0.34
SHKBP1-226ENST00000600791 GLG1Q92896 1179 aa17.18■□□□□ 0.34
SHKBP1-226ENST00000600791 SLC9A2Q9UBY0 812 aa17.18■□□□□ 0.34
SHKBP1-226ENST00000600791 LINC01553A4QN01 128 aa17.17■□□□□ 0.34
SHKBP1-226ENST00000600791 BDP1A6H8Y1 2624 aa17.17■□□□□ 0.34
SHKBP1-226ENST00000600791 LPXNO60711 386 aa17.17■□□□□ 0.34
SHKBP1-226ENST00000600791 SREBF1P36956 1147 aa17.17■□□□□ 0.34
SHKBP1-226ENST00000600791 GRIK4Q16099 956 aa17.17■□□□□ 0.34
SHKBP1-226ENST00000600791 PFKFB3Q16875 520 aaPredicted RBP17.17■□□□□ 0.34
SHKBP1-226ENST00000600791 CEP55Q53EZ4 464 aa17.17■□□□□ 0.34
SHKBP1-226ENST00000600791 FAM26DQ5JW98 314 aa17.17■□□□□ 0.34
SHKBP1-226ENST00000600791 TAF2Q6P1X5 1199 aa17.17■□□□□ 0.34
SHKBP1-226ENST00000600791 ASB2Q96Q27 587 aa17.17■□□□□ 0.34
SHKBP1-226ENST00000600791 PCYT2Q99447 389 aa17.17■□□□□ 0.34
SHKBP1-226ENST00000600791 GLT8D2Q9H1C3 349 aa17.17■□□□□ 0.34
SHKBP1-226ENST00000600791 SMARCAD1Q9H4L7 1026 aa17.17■□□□□ 0.34
SHKBP1-226ENST00000600791 TUBE1Q9UJT0 475 aa17.17■□□□□ 0.34
SHKBP1-226ENST00000600791 MTUS1Q9ULD2 1270 aa17.17■□□□□ 0.34
SHKBP1-226ENST00000600791 NFASCO94856 1347 aa17.17■□□□□ 0.34
SHKBP1-226ENST00000600791 CCDC196A0A1B0GTZ2 297 aa17.16■□□□□ 0.34
SHKBP1-226ENST00000600791 MBLAC1A4D2B0 266 aaPredicted RBP17.16■□□□□ 0.34
SHKBP1-226ENST00000600791 CHRNA1P02708 482 aa17.16■□□□□ 0.34
SHKBP1-226ENST00000600791 ARP10275 920 aa17.16■□□□□ 0.34
SHKBP1-226ENST00000600791 SCG2P13521 617 aa17.16■□□□□ 0.34
SHKBP1-226ENST00000600791 RPS6KB1P23443 525 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms