RNA–Protein interactions for RNA: ENST00000600387.5

ARHGEF1-221, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 2,272 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-221ENST00000600387 OSBPL7Q9BZF2 842 aa20.44■□□□□ 0.86
ARHGEF1-221ENST00000600387 CEP83Q9Y592 693 aa20.44■□□□□ 0.86
ARHGEF1-221ENST00000600387 CCDC188H7C350 402 aa20.43■□□□□ 0.86
ARHGEF1-221ENST00000600387 MARSP56192 900 aaKnown RBP20.43■□□□□ 0.86
ARHGEF1-221ENST00000600387 LRRC41Q15345 812 aa20.43■□□□□ 0.86
ARHGEF1-221ENST00000600387 LACTB2Q53H82 288 aaPredicted RBP20.43■□□□□ 0.86
ARHGEF1-221ENST00000600387 CYB5D1Q6P9G0 228 aa20.43■□□□□ 0.86
ARHGEF1-221ENST00000600387 FUKQ8N0W3 1084 aa20.43■□□□□ 0.86
ARHGEF1-221ENST00000600387 ZNF444Q8N0Y2 327 aaPredicted RBP20.43■□□□□ 0.86
ARHGEF1-221ENST00000600387 SGSM3Q96HU1 749 aa20.43■□□□□ 0.86
ARHGEF1-221ENST00000600387 PACSIN1Q9BY11 444 aa20.43■□□□□ 0.86
ARHGEF1-221ENST00000600387 PRDX5P30044 214 aa20.43■□□□□ 0.86
ARHGEF1-221ENST00000600387 NF2P35240 595 aa20.43■□□□□ 0.86
ARHGEF1-221ENST00000600387 IFFO1Q0D2I5 559 aa20.43■□□□□ 0.86
ARHGEF1-221ENST00000600387 SF3B3Q15393 1217 aaKnown RBP20.43■□□□□ 0.86
ARHGEF1-221ENST00000600387 REXO1Q8N1G1 1221 aaKnown RBP20.43■□□□□ 0.86
ARHGEF1-221ENST00000600387 OR2W6PQ8NHA6 318 aa20.43■□□□□ 0.86
ARHGEF1-221ENST00000600387 SEC63Q9UGP8 760 aaKnown RBP20.43■□□□□ 0.86
ARHGEF1-221ENST00000600387 MTMR7Q9Y216 660 aa20.43■□□□□ 0.86
ARHGEF1-221ENST00000600387 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.43■□□□□ 0.86
ARHGEF1-221ENST00000600387 PGRMC1O00264 195 aaKnown RBP20.42■□□□□ 0.86
ARHGEF1-221ENST00000600387 SLC4A8Q2Y0W8 1093 aa20.42■□□□□ 0.86
ARHGEF1-221ENST00000600387 KRT79Q5XKE5 535 aa20.42■□□□□ 0.86
ARHGEF1-221ENST00000600387 FAM133AQ8N9E0 248 aa20.42■□□□□ 0.86
ARHGEF1-221ENST00000600387 UBLCP1Q8WVY7 318 aaPredicted RBP20.42■□□□□ 0.86
ARHGEF1-221ENST00000600387 DYNLL2Q96FJ2 89 aa20.42■□□□□ 0.86
ARHGEF1-221ENST00000600387 STX8Q9UNK0 236 aa20.42■□□□□ 0.86
ARHGEF1-221ENST00000600387 LEMD3Q9Y2U8 911 aa20.42■□□□□ 0.86
ARHGEF1-221ENST00000600387 ESYT2A0FGR8 921 aa20.42■□□□□ 0.86
ARHGEF1-221ENST00000600387 SART1O43290 800 aaKnown RBP20.42■□□□□ 0.86
ARHGEF1-221ENST00000600387 CEP104O60308 925 aa20.42■□□□□ 0.86
ARHGEF1-221ENST00000600387 GOLGA8HP0CJ92 632 aa20.42■□□□□ 0.86
ARHGEF1-221ENST00000600387 ELF1P32519 619 aa20.42■□□□□ 0.86
ARHGEF1-221ENST00000600387 CRKLP46109 303 aaKnown RBP20.42■□□□□ 0.86
ARHGEF1-221ENST00000600387 QPCTQ16769 361 aa20.42■□□□□ 0.86
ARHGEF1-221ENST00000600387 TRIM59Q8IWR1 403 aa20.42■□□□□ 0.86
ARHGEF1-221ENST00000600387 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.42■□□□□ 0.865e-12■■■□□ 17
ARHGEF1-221ENST00000600387 BCCIPQ9P287 314 aaKnown RBP eCLIP20.42■□□□□ 0.86
ARHGEF1-221ENST00000600387 SWAP70Q9UH65 585 aa20.42■□□□□ 0.86
ARHGEF1-221ENST00000600387 FBXL5Q9UKA1 691 aa20.42■□□□□ 0.86
ARHGEF1-221ENST00000600387 NAV1Q8NEY1 1877 aa20.41■□□□□ 0.86
ARHGEF1-221ENST00000600387 DNM1LO00429 736 aa20.41■□□□□ 0.86
ARHGEF1-221ENST00000600387 TMOD1P28289 359 aa20.41■□□□□ 0.86
ARHGEF1-221ENST00000600387 SMARCA1P28370 1054 aa20.41■□□□□ 0.86
ARHGEF1-221ENST00000600387 HIBADHP31937 336 aaKnown RBP20.41■□□□□ 0.86
ARHGEF1-221ENST00000600387 ARID5AQ03989 594 aa20.41■□□□□ 0.86
ARHGEF1-221ENST00000600387 COASYQ13057 564 aa20.41■□□□□ 0.86
ARHGEF1-221ENST00000600387 TMEM119Q4V9L6 283 aa20.41■□□□□ 0.86
ARHGEF1-221ENST00000600387 GKAP1Q5VSY0 366 aaPredicted RBP20.41■□□□□ 0.86
ARHGEF1-221ENST00000600387 GLIS3Q8NEA6 775 aa20.41■□□□□ 0.86
ARHGEF1-221ENST00000600387 SNX29Q8TEQ0 813 aa20.41■□□□□ 0.86
ARHGEF1-221ENST00000600387 RAPGEF5Q92565 580 aa20.41■□□□□ 0.86
ARHGEF1-221ENST00000600387 TATDN2Q93075 761 aa20.41■□□□□ 0.86
ARHGEF1-221ENST00000600387 SUFUQ9UMX1 484 aa20.41■□□□□ 0.86
ARHGEF1-221ENST00000600387 SLITRK6Q9H5Y7 841 aa20.41■□□□□ 0.86
ARHGEF1-221ENST00000600387 CNOT10Q9H9A5 744 aaKnown RBP20.41■□□□□ 0.86
ARHGEF1-221ENST00000600387 BIN2Q9UBW5 565 aaPredicted RBP20.41■□□□□ 0.86
ARHGEF1-221ENST00000600387 ODF2LQ9ULJ1 636 aa20.41■□□□□ 0.86
ARHGEF1-221ENST00000600387 BZW2Q9Y6E2 419 aaKnown RBP20.41■□□□□ 0.86
ARHGEF1-221ENST00000600387 GHRP10912 638 aa20.4■□□□□ 0.86
ARHGEF1-221ENST00000600387 PSEN1P49768 467 aa20.4■□□□□ 0.86
ARHGEF1-221ENST00000600387 XRCC4Q13426 336 aa20.4■□□□□ 0.86
ARHGEF1-221ENST00000600387 SPTY2D1Q68D10 685 aaPredicted RBP20.4■□□□□ 0.86
ARHGEF1-221ENST00000600387 DDX42Q86XP3 938 aaKnown RBP eCLIP20.4■□□□□ 0.86
ARHGEF1-221ENST00000600387 LRRC57Q8N9N7 239 aa20.4■□□□□ 0.86
ARHGEF1-221ENST00000600387 CCDC26Q8TAB7 109 aa20.4■□□□□ 0.86
ARHGEF1-221ENST00000600387 NEUROG2Q9H2A3 272 aa20.4■□□□□ 0.86
ARHGEF1-221ENST00000600387 GANQ9H2C0 597 aa20.4■□□□□ 0.86
ARHGEF1-221ENST00000600387 KDM4CQ9H3R0 1056 aa20.4■□□□□ 0.86
ARHGEF1-221ENST00000600387 NOVA2Q9UNW9 492 aaKnown RBP20.4■□□□□ 0.86
ARHGEF1-221ENST00000600387 ATP8B3O60423 1300 aa20.4■□□□□ 0.86
ARHGEF1-221ENST00000600387 EPS15P42566 896 aa20.39■□□□□ 0.86
ARHGEF1-221ENST00000600387 SCTRP47872 440 aa20.39■□□□□ 0.86
ARHGEF1-221ENST00000600387 FAM26FQ5R3K3 315 aa20.39■□□□□ 0.86
ARHGEF1-221ENST00000600387 DZIP1Q86YF9 867 aaKnown RBP20.39■□□□□ 0.86
ARHGEF1-221ENST00000600387 DNAJC19Q96DA6 116 aa20.39■□□□□ 0.86
ARHGEF1-221ENST00000600387 CNOT8Q9UFF9 292 aaKnown RBP20.39■□□□□ 0.86
ARHGEF1-221ENST00000600387 NOC2LQ9Y3T9 749 aaKnown RBP20.39■□□□□ 0.86
ARHGEF1-221ENST00000600387 A0A0G2JS52 829 aa20.39■□□□□ 0.85
ARHGEF1-221ENST00000600387 hCG_1984214I3L0E3 225 aa20.39■□□□□ 0.85
ARHGEF1-221ENST00000600387 SLC8A1P32418 973 aa20.39■□□□□ 0.85
ARHGEF1-221ENST00000600387 SPDYCQ5MJ68 293 aa20.39■□□□□ 0.85
ARHGEF1-221ENST00000600387 ZNF713Q8N859 430 aaPredicted RBP20.39■□□□□ 0.85
ARHGEF1-221ENST00000600387 LMBR1Q8WVP7 490 aa20.39■□□□□ 0.85
ARHGEF1-221ENST00000600387 PANK4Q9NVE7 773 aa20.39■□□□□ 0.85
ARHGEF1-221ENST00000600387 ZNF652Q9Y2D9 606 aa20.39■□□□□ 0.85
ARHGEF1-221ENST00000600387 DOT1LQ8TEK3 1739 aa20.38■□□□□ 0.85
ARHGEF1-221ENST00000600387 POTEMA6NI47 508 aa20.38■□□□□ 0.85
ARHGEF1-221ENST00000600387 KRIT1O00522 736 aa20.38■□□□□ 0.85
ARHGEF1-221ENST00000600387 DNAJC8O75937 253 aaPredicted RBP20.38■□□□□ 0.85
ARHGEF1-221ENST00000600387 EZRP15311 586 aaKnown RBP20.38■□□□□ 0.85
ARHGEF1-221ENST00000600387 BYSLQ13895 437 aaKnown RBP20.38■□□□□ 0.85
ARHGEF1-221ENST00000600387 TMC3Q7Z5M5 1100 aa20.38■□□□□ 0.85
ARHGEF1-221ENST00000600387 CPLX4Q7Z7G2 160 aa20.38■□□□□ 0.85
ARHGEF1-221ENST00000600387 SEC14L1Q92503 715 aa20.38■□□□□ 0.85
ARHGEF1-221ENST00000600387 CENPTQ96BT3 561 aa20.38■□□□□ 0.85
ARHGEF1-221ENST00000600387 AP1M1Q9BXS5 423 aa20.38■□□□□ 0.85
ARHGEF1-221ENST00000600387 VEZTQ9HBM0 779 aa20.38■□□□□ 0.85
ARHGEF1-221ENST00000600387 FAM114A2Q9NRY5 505 aa20.38■□□□□ 0.85
ARHGEF1-221ENST00000600387 HAUS2Q9NVX0 235 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms