RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 SELPP16109 830 aa16.09■□□□□ 0.17
LIG1-218ENST00000599322 KCNA2P16389 499 aa16.09■□□□□ 0.17
LIG1-218ENST00000599322 CLK2P49760 499 aaKnown RBP16.09■□□□□ 0.17
LIG1-218ENST00000599322 NEK4P51957 841 aa16.09■□□□□ 0.17
LIG1-218ENST00000599322 SETQ01105 290 aaPredicted RBP16.09■□□□□ 0.17
LIG1-218ENST00000599322 PLA2G4DQ86XP0 818 aa16.09■□□□□ 0.17
LIG1-218ENST00000599322 HERVK_113Q902F9 699 aa16.09■□□□□ 0.17
LIG1-218ENST00000599322 WNT8AQ9H1J5 351 aa16.09■□□□□ 0.17
LIG1-218ENST00000599322 UPF2Q9HAU5 1272 aaKnown RBP16.09■□□□□ 0.17
LIG1-218ENST00000599322 ERAP1Q9NZ08 941 aa16.09■□□□□ 0.17
LIG1-218ENST00000599322 VPS54Q9P1Q0 977 aa16.09■□□□□ 0.17
LIG1-218ENST00000599322 MSRAQ9UJ68 235 aa16.09■□□□□ 0.17
LIG1-218ENST00000599322 SLC4A7Q9Y6M7 1214 aa16.09■□□□□ 0.17
LIG1-218ENST00000599322 VCANP13611 3396 aa16.09■□□□□ 0.17
LIG1-218ENST00000599322 NFASCO94856 1347 aa16.09■□□□□ 0.17
LIG1-218ENST00000599322 UMODL1Q5DID0 1318 aa16.09■□□□□ 0.17
LIG1-218ENST00000599322 MYO9BQ13459 2157 aa16.09■□□□□ 0.17
LIG1-218ENST00000599322 MEIS1O00470 390 aa16.08■□□□□ 0.16
LIG1-218ENST00000599322 ATP9AO75110 1047 aa16.08■□□□□ 0.16
LIG1-218ENST00000599322 CYP3A4P08684 503 aa16.08■□□□□ 0.16
LIG1-218ENST00000599322 SMIM10L2AP0DMW4 78 aa16.08■□□□□ 0.16
LIG1-218ENST00000599322 SMIM10L2BP0DMW5 78 aa16.08■□□□□ 0.16
LIG1-218ENST00000599322 LRRC8DQ7L1W4 858 aa16.08■□□□□ 0.16
LIG1-218ENST00000599322 OTOP2Q7RTS6 562 aa16.08■□□□□ 0.16
LIG1-218ENST00000599322 MAFAQ8NHW3 353 aaPredicted RBP16.08■□□□□ 0.16
LIG1-218ENST00000599322 TMEM265A0A087WTH1 108 aa16.07■□□□□ 0.16
LIG1-218ENST00000599322 PFKFB2O60825 505 aa16.07■□□□□ 0.16
LIG1-218ENST00000599322 AK2P54819 239 aa16.07■□□□□ 0.16
LIG1-218ENST00000599322 RAB30Q15771 203 aa16.07■□□□□ 0.16
LIG1-218ENST00000599322 FAM160B1Q5W0V3 765 aa16.07■□□□□ 0.16
LIG1-218ENST00000599322 C16orf59Q7L2K0 433 aa16.07■□□□□ 0.16
LIG1-218ENST00000599322 RSPH3Q86UC2 560 aa16.07■□□□□ 0.16
LIG1-218ENST00000599322 ZNF577Q9BSK1 485 aa16.07■□□□□ 0.16
LIG1-218ENST00000599322 BCAS3Q9H6U6 928 aa16.07■□□□□ 0.16
LIG1-218ENST00000599322 AGO4Q9HCK5 861 aaKnown RBP16.07■□□□□ 0.16
LIG1-218ENST00000599322 TBC1D22BQ9NU19 505 aa16.07■□□□□ 0.16
LIG1-218ENST00000599322 PCDHA4Q9UN74 947 aa16.07■□□□□ 0.16
LIG1-218ENST00000599322 NRCAMQ92823 1304 aa16.07■□□□□ 0.16
LIG1-218ENST00000599322 EMSYQ7Z589 1322 aa16.06■□□□□ 0.16
LIG1-218ENST00000599322 BACH1O14867 736 aa16.06■□□□□ 0.16
LIG1-218ENST00000599322 RPLP2P05387 115 aaKnown RBP16.06■□□□□ 0.16
LIG1-218ENST00000599322 ARP10275 920 aa16.06■□□□□ 0.16
LIG1-218ENST00000599322 CKBP12277 381 aa16.06■□□□□ 0.16
LIG1-218ENST00000599322 THPOP40225 353 aa16.06■□□□□ 0.16
LIG1-218ENST00000599322 KCNJ6P48051 423 aa16.06■□□□□ 0.16
LIG1-218ENST00000599322 USP11P51784 963 aa16.06■□□□□ 0.16
LIG1-218ENST00000599322 MIS18BP1Q6P0N0 1132 aa16.06■□□□□ 0.16
LIG1-218ENST00000599322 BLIDQ8IZY5 108 aa16.06■□□□□ 0.16
LIG1-218ENST00000599322 RNPEPQ9H4A4 650 aa16.06■□□□□ 0.16
LIG1-218ENST00000599322 BRMS1Q9HCU9 246 aa16.06■□□□□ 0.16
LIG1-218ENST00000599322 STK36Q9NRP7 1315 aa16.05■□□□□ 0.16
LIG1-218ENST00000599322 GSTTP1A0A1W2PQM5 241 aa16.05■□□□□ 0.16
LIG1-218ENST00000599322 RRN3P2A6NIE6 340 aa16.05■□□□□ 0.16
LIG1-218ENST00000599322 KIF28PB7ZC32 967 aa16.05■□□□□ 0.16
LIG1-218ENST00000599322 IPO5O00410 1097 aaKnown RBP16.05■□□□□ 0.16
LIG1-218ENST00000599322 EFCAB14O75071 495 aa16.05■□□□□ 0.16
LIG1-218ENST00000599322 CAND2O75155 1236 aa16.05■□□□□ 0.16
LIG1-218ENST00000599322 SLC26A2P50443 739 aa16.05■□□□□ 0.16
LIG1-218ENST00000599322 ACTR2P61160 394 aa16.05■□□□□ 0.16
LIG1-218ENST00000599322 RBL2Q08999 1139 aa16.05■□□□□ 0.16
LIG1-218ENST00000599322 SCRN1Q12765 414 aa16.05■□□□□ 0.16
LIG1-218ENST00000599322 PPFIA1Q13136 1202 aa16.05■□□□□ 0.16
LIG1-218ENST00000599322 TRIM29Q14134 588 aa16.05■□□□□ 0.16
LIG1-218ENST00000599322 TRIM50Q86XT4 487 aa16.05■□□□□ 0.16
LIG1-218ENST00000599322 CYP2W1Q8TAV3 490 aa16.05■□□□□ 0.16
LIG1-218ENST00000599322 SETD4Q9NVD3 440 aa16.05■□□□□ 0.16
LIG1-218ENST00000599322 TPCN1Q9ULQ1 816 aa16.05■□□□□ 0.16
LIG1-218ENST00000599322 TRPC6Q9Y210 931 aa16.05■□□□□ 0.16
LIG1-218ENST00000599322 SCN5AQ14524 2016 aa16.04■□□□□ 0.16
LIG1-218ENST00000599322 CCDC194A0A1B0GVG4 234 aa16.04■□□□□ 0.16
LIG1-218ENST00000599322 RSPH10B2B2RC85 870 aa16.04■□□□□ 0.16
LIG1-218ENST00000599322 DDX39AO00148 427 aaKnown RBP16.04■□□□□ 0.16
LIG1-218ENST00000599322 BAIAP3O94812 1187 aa16.04■□□□□ 0.16
LIG1-218ENST00000599322 RSPH10BP0C881 870 aa16.04■□□□□ 0.16
LIG1-218ENST00000599322 MARK3P27448 753 aa16.04■□□□□ 0.16
LIG1-218ENST00000599322 STAT5BP51692 787 aa16.04■□□□□ 0.16
LIG1-218ENST00000599322 ZNF200P98182 395 aaPredicted RBP16.04■□□□□ 0.16
LIG1-218ENST00000599322 PRR16Q569H4 304 aa16.04■□□□□ 0.16
LIG1-218ENST00000599322 TAF2Q6P1X5 1199 aa16.04■□□□□ 0.16
LIG1-218ENST00000599322 PLPPR4Q7Z2D5 763 aa16.04■□□□□ 0.16
LIG1-218ENST00000599322 KRT25Q7Z3Z0 450 aa16.04■□□□□ 0.16
LIG1-218ENST00000599322 SERINC5Q86VE9 423 aa16.04■□□□□ 0.16
LIG1-218ENST00000599322 RASGRP4Q8TDF6 673 aa16.04■□□□□ 0.16
LIG1-218ENST00000599322 TIFAQ96CG3 184 aa16.04■□□□□ 0.16
LIG1-218ENST00000599322 ORC3Q9UBD5 711 aaPredicted RBP16.04■□□□□ 0.16
LIG1-218ENST00000599322 SPTBN5Q9NRC6 3674 aaKnown RBP16.03■□□□□ 0.16
LIG1-218ENST00000599322 FAM86B1E9PN63 330 aa16.03■□□□□ 0.16
LIG1-218ENST00000599322 TREHO43280 583 aa16.03■□□□□ 0.16
LIG1-218ENST00000599322 FAM86B2P0C5J1 330 aa16.03■□□□□ 0.16
LIG1-218ENST00000599322 FOSL2P15408 326 aa16.03■□□□□ 0.16
LIG1-218ENST00000599322 ATP2A2P16615 1042 aaKnown RBP16.03■□□□□ 0.16
LIG1-218ENST00000599322 DNAJB2P25686 324 aa16.03■□□□□ 0.16
LIG1-218ENST00000599322 CIITAP33076 1130 aa16.03■□□□□ 0.16
LIG1-218ENST00000599322 KRT76Q01546 638 aa16.03■□□□□ 0.16
LIG1-218ENST00000599322 IKBKEQ14164 716 aa16.03■□□□□ 0.16
LIG1-218ENST00000599322 GRIN2CQ14957 1233 aa16.03■□□□□ 0.16
LIG1-218ENST00000599322 NONOQ15233 471 aaKnown RBP eCLIP16.03■□□□□ 0.16
LIG1-218ENST00000599322 RASIP1Q5U651 963 aa16.03■□□□□ 0.16
LIG1-218ENST00000599322 CNKSR3Q6P9H4 555 aa16.03■□□□□ 0.16
LIG1-218ENST00000599322 CKAP2LQ8IYA6 745 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms