RNA–Protein interactions for RNA: ENST00000598938.1

LIG1-216, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 377 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-216ENST00000598938 ZEB2O60315 1214 aa20.59■□□□□ 0.89
LIG1-216ENST00000598938 ASGR1P07306 291 aa20.59■□□□□ 0.89
LIG1-216ENST00000598938 HOXD8P13378 290 aaPredicted RBP20.59■□□□□ 0.89
LIG1-216ENST00000598938 TRAPPC10P48553 1259 aa20.59■□□□□ 0.89
LIG1-216ENST00000598938 ACLYP53396 1101 aa20.59■□□□□ 0.89
LIG1-216ENST00000598938 BRDTQ58F21 947 aaPredicted RBP20.59■□□□□ 0.89
LIG1-216ENST00000598938 ETNPPLQ8TBG4 499 aa20.59■□□□□ 0.89
LIG1-216ENST00000598938 BADQ92934 168 aa20.59■□□□□ 0.89
LIG1-216ENST00000598938 SDF4Q9BRK5 362 aa20.59■□□□□ 0.89
LIG1-216ENST00000598938 SPTBN5Q9NRC6 3674 aaKnown RBP20.59■□□□□ 0.89
LIG1-216ENST00000598938 PRUNE2Q8WUY3 3088 aa20.58■□□□□ 0.89
LIG1-216ENST00000598938 STX6O43752 255 aa20.58■□□□□ 0.89
LIG1-216ENST00000598938 SYMPKQ92797 1274 aaKnown RBP20.58■□□□□ 0.89
LIG1-216ENST00000598938 SLC5A5Q92911 643 aa20.58■□□□□ 0.89
LIG1-216ENST00000598938 GPR20Q99678 358 aa20.58■□□□□ 0.89
LIG1-216ENST00000598938 JPH1Q9HDC5 661 aaPredicted RBP20.58■□□□□ 0.89
LIG1-216ENST00000598938 KCNMB3Q9NPA1 279 aa20.58■□□□□ 0.89
LIG1-216ENST00000598938 TBC1D22BQ9NU19 505 aa20.58■□□□□ 0.89
LIG1-216ENST00000598938 POLR3EQ9NVU0 708 aa20.58■□□□□ 0.89
LIG1-216ENST00000598938 NOL7Q9UMY1 257 aaKnown RBP20.58■□□□□ 0.89
LIG1-216ENST00000598938 MTMR6Q9Y217 621 aa20.58■□□□□ 0.89
LIG1-216ENST00000598938 DOCK5Q9H7D0 1870 aa20.58■□□□□ 0.88
LIG1-216ENST00000598938 A0A1W2PQ45 241 aaPredicted RBP20.57■□□□□ 0.88
LIG1-216ENST00000598938 A0A1W2PQY0 241 aa20.57■□□□□ 0.88
LIG1-216ENST00000598938 KPNA6O60684 536 aa20.57■□□□□ 0.88
LIG1-216ENST00000598938 ORC2Q13416 577 aaPredicted RBP20.57■□□□□ 0.88
LIG1-216ENST00000598938 TTC28Q96AY4 2481 aa20.57■□□□□ 0.88
LIG1-216ENST00000598938 UIMC1Q96RL1 719 aa20.57■□□□□ 0.88
LIG1-216ENST00000598938 RIT2Q99578 217 aa20.57■□□□□ 0.88
LIG1-216ENST00000598938 TTYH1Q9H313 450 aaPredicted RBP20.57■□□□□ 0.88
LIG1-216ENST00000598938 SLC9A2Q9UBY0 812 aa20.57■□□□□ 0.88
LIG1-216ENST00000598938 TELO2Q9Y4R8 837 aa20.57■□□□□ 0.88
LIG1-216ENST00000598938 TBX3O15119 743 aa20.56■□□□□ 0.88
LIG1-216ENST00000598938 PPFIA4O75335 1185 aa20.56■□□□□ 0.88
LIG1-216ENST00000598938 MYL3P08590 195 aa20.56■□□□□ 0.88
LIG1-216ENST00000598938 PDIA4P13667 645 aaKnown RBP20.56■□□□□ 0.88
LIG1-216ENST00000598938 TOB1P50616 345 aaPredicted RBP20.56■□□□□ 0.88
LIG1-216ENST00000598938 PURAQ00577 322 aaKnown RBP20.56■□□□□ 0.88
LIG1-216ENST00000598938 DGKDQ16760 1214 aa20.56■□□□□ 0.88
LIG1-216ENST00000598938 TTC38Q5R3I4 469 aa20.56■□□□□ 0.88
LIG1-216ENST00000598938 CXCL17Q6UXB2 119 aa20.56■□□□□ 0.88
LIG1-216ENST00000598938 BRAPQ7Z569 592 aa20.56■□□□□ 0.88
LIG1-216ENST00000598938 POTEDQ86YR6 584 aa20.56■□□□□ 0.88
LIG1-216ENST00000598938 TRIM43BA6NCK2 446 aa20.55■□□□□ 0.88
LIG1-216ENST00000598938 NOP56O00567 594 aaKnown RBP20.55■□□□□ 0.88
LIG1-216ENST00000598938 PSMD10O75832 226 aa20.55■□□□□ 0.88
LIG1-216ENST00000598938 CABYRO75952 493 aa20.55■□□□□ 0.88
LIG1-216ENST00000598938 FOSL2P15408 326 aa20.55■□□□□ 0.88
LIG1-216ENST00000598938 ATP2B1P20020 1258 aa20.55■□□□□ 0.88
LIG1-216ENST00000598938 RESTQ13127 1097 aa20.55■□□□□ 0.88
LIG1-216ENST00000598938 MYLIPQ8WY64 445 aa20.55■□□□□ 0.88
LIG1-216ENST00000598938 HAS1Q92839 578 aa20.55■□□□□ 0.88
LIG1-216ENST00000598938 FERMT2Q96AC1 680 aa20.55■□□□□ 0.88
LIG1-216ENST00000598938 TRIM43Q96BQ3 446 aaPredicted RBP20.55■□□□□ 0.88
LIG1-216ENST00000598938 FAM20AQ96MK3 541 aa20.55■□□□□ 0.88
LIG1-216ENST00000598938 GSTTP1A0A1W2PQM5 241 aa20.54■□□□□ 0.88
LIG1-216ENST00000598938 NEMFO60524 1076 aa20.54■□□□□ 0.88
LIG1-216ENST00000598938 CCNE2O96020 404 aa20.54■□□□□ 0.88
LIG1-216ENST00000598938 CLTBP09497 229 aa20.54■□□□□ 0.88
LIG1-216ENST00000598938 ACTR2P61160 394 aa20.54■□□□□ 0.88
LIG1-216ENST00000598938 SP4Q02446 784 aa20.54■□□□□ 0.88
LIG1-216ENST00000598938 RILPL1Q5EBL4 403 aa20.54■□□□□ 0.88
LIG1-216ENST00000598938 LRCH2Q5VUJ6 765 aa20.54■□□□□ 0.88
LIG1-216ENST00000598938 SH3RF1Q7Z6J0 888 aa20.54■□□□□ 0.88
LIG1-216ENST00000598938 FERMT3Q86UX7 667 aa20.54■□□□□ 0.88
LIG1-216ENST00000598938 SEPT1Q8WYJ6 367 aa20.54■□□□□ 0.88
LIG1-216ENST00000598938 GJA10Q969M2 543 aa20.54■□□□□ 0.88
LIG1-216ENST00000598938 GLT1D1Q96MS3 346 aa20.54■□□□□ 0.88
LIG1-216ENST00000598938 MTG1Q9BT17 334 aaPredicted RBP20.54■□□□□ 0.88
LIG1-216ENST00000598938 PRDM6Q9NQX0 595 aa20.54■□□□□ 0.88
LIG1-216ENST00000598938 ELP1O95163 1332 aa20.53■□□□□ 0.88
LIG1-216ENST00000598938 DDX39AO00148 427 aaKnown RBP20.53■□□□□ 0.88
LIG1-216ENST00000598938 KIAA0355O15063 1070 aa20.53■□□□□ 0.88
LIG1-216ENST00000598938 GAS7O60861 476 aa20.53■□□□□ 0.88
LIG1-216ENST00000598938 ATG7O95352 703 aa20.53■□□□□ 0.88
LIG1-216ENST00000598938 MCM7P33993 719 aa20.53■□□□□ 0.88
LIG1-216ENST00000598938 KRT76Q01546 638 aa20.53■□□□□ 0.88
LIG1-216ENST00000598938 TLE2Q04725 743 aa20.53■□□□□ 0.88
LIG1-216ENST00000598938 NBR1Q14596 966 aa20.53■□□□□ 0.88
LIG1-216ENST00000598938 ZNF746Q6NUN9 644 aaPredicted RBP20.53■□□□□ 0.88
LIG1-216ENST00000598938 B3GNT9Q6UX72 402 aa20.53■□□□□ 0.88
LIG1-216ENST00000598938 KAT2BQ92831 832 aa20.53■□□□□ 0.88
LIG1-216ENST00000598938 RNPC3Q96LT9 517 aaKnown RBP20.53■□□□□ 0.88
LIG1-216ENST00000598938 MTMR9Q96QG7 549 aa20.53■□□□□ 0.88
LIG1-216ENST00000598938 TEKT3Q9BXF9 490 aa20.53■□□□□ 0.88
LIG1-216ENST00000598938 PCDHB6Q9Y5E3 794 aa20.53■□□□□ 0.88
LIG1-216ENST00000598938 F2P00734 622 aa20.52■□□□□ 0.88
LIG1-216ENST00000598938 LGALS2P05162 132 aa20.52■□□□□ 0.88
LIG1-216ENST00000598938 ZNF286BP0CG31 522 aa20.52■□□□□ 0.88
LIG1-216ENST00000598938 TCF7P36402 384 aaPredicted RBP20.52■□□□□ 0.88
LIG1-216ENST00000598938 ZNF174Q15697 407 aa20.52■□□□□ 0.88
LIG1-216ENST00000598938 CALCRLQ16602 461 aa20.52■□□□□ 0.88
LIG1-216ENST00000598938 SLFN12Q8IYM2 578 aa20.52■□□□□ 0.88
LIG1-216ENST00000598938 C16orf70Q9BSU1 422 aa20.52■□□□□ 0.88
LIG1-216ENST00000598938 TMEM60Q9H2L4 133 aa20.52■□□□□ 0.88
LIG1-216ENST00000598938 ZSCAN16Q9H4T2 348 aaPredicted RBP20.52■□□□□ 0.88
LIG1-216ENST00000598938 STARD7Q9NQZ5 370 aa20.52■□□□□ 0.88
LIG1-216ENST00000598938 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.52■□□□□ 0.88
LIG1-216ENST00000598938 LGR5O75473 907 aa20.51■□□□□ 0.87
LIG1-216ENST00000598938 BAG4O95429 457 aaKnown RBP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms