RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 UIMC1Q96RL1 719 aa15.74■□□□□ 0.11
SCAF1-203ENST00000598359 ANO3Q9BYT9 981 aa15.74■□□□□ 0.11
SCAF1-203ENST00000598359 JADE2Q9NQC1 790 aa15.74■□□□□ 0.11
SCAF1-203ENST00000598359 GSTTP1A0A1W2PQM5 241 aa15.73■□□□□ 0.11
SCAF1-203ENST00000598359 ARP10275 920 aa15.73■□□□□ 0.11
SCAF1-203ENST00000598359 SCG2P13521 617 aa15.73■□□□□ 0.11
SCAF1-203ENST00000598359 MARK3P27448 753 aa15.73■□□□□ 0.11
SCAF1-203ENST00000598359 PSMA5P28066 241 aa15.73■□□□□ 0.11
SCAF1-203ENST00000598359 HOXC8P31273 242 aa15.73■□□□□ 0.11
SCAF1-203ENST00000598359 TOB2Q14106 344 aaPredicted RBP15.73■□□□□ 0.11
SCAF1-203ENST00000598359 PKN1Q16512 942 aa15.73■□□□□ 0.11
SCAF1-203ENST00000598359 CDHR1Q96JP9 859 aa15.73■□□□□ 0.11
SCAF1-203ENST00000598359 MXRA8Q9BRK3 442 aa15.73■□□□□ 0.11
SCAF1-203ENST00000598359 AGXT2Q9BYV1 514 aa15.73■□□□□ 0.11
SCAF1-203ENST00000598359 OSBPL7Q9BZF2 842 aa15.73■□□□□ 0.11
SCAF1-203ENST00000598359 UPF3BQ9BZI7 483 aaKnown RBP15.73■□□□□ 0.11
SCAF1-203ENST00000598359 EHMT1Q9H9B1 1298 aa15.73■□□□□ 0.11
SCAF1-203ENST00000598359 SLC28A3Q9HAS3 691 aa15.73■□□□□ 0.11
SCAF1-203ENST00000598359 NID2Q14112 1375 aa15.73■□□□□ 0.11
SCAF1-203ENST00000598359 BDP1A6H8Y1 2624 aa15.72■□□□□ 0.11
SCAF1-203ENST00000598359 CCDC196A0A1B0GTZ2 297 aa15.72■□□□□ 0.11
SCAF1-203ENST00000598359 ARHGEF15O94989 841 aa15.72■□□□□ 0.11
SCAF1-203ENST00000598359 CXCL10P02778 98 aa15.72■□□□□ 0.11
SCAF1-203ENST00000598359 CTSHP09668 335 aa15.72■□□□□ 0.11
SCAF1-203ENST00000598359 PDIA3P30101 505 aaKnown RBP15.72■□□□□ 0.11
SCAF1-203ENST00000598359 CLK2P49760 499 aaKnown RBP15.72■□□□□ 0.11
SCAF1-203ENST00000598359 WDR5P61964 334 aaKnown RBP15.72■□□□□ 0.11
SCAF1-203ENST00000598359 DEFB103AP81534 67 aa15.72■□□□□ 0.11
SCAF1-203ENST00000598359 ARHGAP4P98171 946 aa15.72■□□□□ 0.11
SCAF1-203ENST00000598359 ADGRE1Q14246 886 aa15.72■□□□□ 0.11
SCAF1-203ENST00000598359 PPP2R2DQ66LE6 453 aa15.72■□□□□ 0.11
SCAF1-203ENST00000598359 RUFY3Q7L099 469 aa15.72■□□□□ 0.11
SCAF1-203ENST00000598359 USP38Q8NB14 1042 aa15.72■□□□□ 0.11
SCAF1-203ENST00000598359 GIMAP8Q8ND71 665 aaPredicted RBP15.72■□□□□ 0.11
SCAF1-203ENST00000598359 CERS4Q9HA82 394 aa15.72■□□□□ 0.11
SCAF1-203ENST00000598359 ZSWIM6Q9HCJ5 1215 aa15.72■□□□□ 0.11
SCAF1-203ENST00000598359 KCNH7Q9NS40 1196 aa15.72■□□□□ 0.11
SCAF1-203ENST00000598359 ZNF215Q9UL58 517 aaPredicted RBP15.72■□□□□ 0.11
SCAF1-203ENST00000598359 PCDHA11Q9Y5I1 949 aa15.72■□□□□ 0.11
SCAF1-203ENST00000598359 TCF20Q9UGU0 1960 aaKnown RBP15.72■□□□□ 0.11
SCAF1-203ENST00000598359 CHD7Q9P2D1 2997 aa15.71■□□□□ 0.11
SCAF1-203ENST00000598359 RSPH10B2B2RC85 870 aa15.71■□□□□ 0.11
SCAF1-203ENST00000598359 hCG_1984214I3L0E3 225 aa15.71■□□□□ 0.11
SCAF1-203ENST00000598359 FOSP01100 380 aaPredicted RBP15.71■□□□□ 0.11
SCAF1-203ENST00000598359 CA3P07451 260 aa15.71■□□□□ 0.11
SCAF1-203ENST00000598359 RSPH10BP0C881 870 aa15.71■□□□□ 0.11
SCAF1-203ENST00000598359 ITGB3BPQ13352 177 aaPredicted RBP15.71■□□□□ 0.11
SCAF1-203ENST00000598359 NTRK3Q16288 839 aa15.71■□□□□ 0.11
SCAF1-203ENST00000598359 CNKSR3Q6P9H4 555 aa15.71■□□□□ 0.11
SCAF1-203ENST00000598359 SPRED2Q7Z698 418 aa15.71■□□□□ 0.11
SCAF1-203ENST00000598359 HERC6Q8IVU3 1022 aa15.71■□□□□ 0.11
SCAF1-203ENST00000598359 FBXL16Q8N461 479 aa15.71■□□□□ 0.11
SCAF1-203ENST00000598359 ZNF713Q8N859 430 aaPredicted RBP15.71■□□□□ 0.11
SCAF1-203ENST00000598359 RASGRP4Q8TDF6 673 aa15.71■□□□□ 0.11
SCAF1-203ENST00000598359 LMBR1Q8WVP7 490 aa15.71■□□□□ 0.11
SCAF1-203ENST00000598359 PPM1EQ8WY54 764 aa15.71■□□□□ 0.11
SCAF1-203ENST00000598359 SEPT1Q8WYJ6 367 aa15.71■□□□□ 0.11
SCAF1-203ENST00000598359 ZBTB10Q96DT7 871 aa15.71■□□□□ 0.11
SCAF1-203ENST00000598359 SLC9A7Q96T83 725 aa15.71■□□□□ 0.11
SCAF1-203ENST00000598359 SLC26A6Q9BXS9 759 aa15.71■□□□□ 0.11
SCAF1-203ENST00000598359 BACH2Q9BYV9 841 aa15.71■□□□□ 0.11
SCAF1-203ENST00000598359 RFXAPO00287 272 aa15.7■□□□□ 0.1
SCAF1-203ENST00000598359 PRPF3O43395 683 aaKnown RBP15.7■□□□□ 0.1
SCAF1-203ENST00000598359 BAIAP3O94812 1187 aa15.7■□□□□ 0.1
SCAF1-203ENST00000598359 IGFBP4P22692 258 aa15.7■□□□□ 0.1
SCAF1-203ENST00000598359 SREBF1P36956 1147 aa15.7■□□□□ 0.1
SCAF1-203ENST00000598359 KCNJ6P48051 423 aa15.7■□□□□ 0.1
SCAF1-203ENST00000598359 CEP55Q53EZ4 464 aa15.7■□□□□ 0.1
SCAF1-203ENST00000598359 RUFY4Q6ZNE9 571 aa15.7■□□□□ 0.1
SCAF1-203ENST00000598359 GLG1Q92896 1179 aa15.7■□□□□ 0.1
SCAF1-203ENST00000598359 PCYT2Q99447 389 aa15.7■□□□□ 0.1
SCAF1-203ENST00000598359 GAS2L1Q99501 681 aaPredicted RBP15.7■□□□□ 0.1
SCAF1-203ENST00000598359 AGO4Q9HCK5 861 aaKnown RBP15.7■□□□□ 0.1
SCAF1-203ENST00000598359 JPH1Q9HDC5 661 aaPredicted RBP15.7■□□□□ 0.1
SCAF1-203ENST00000598359 CYP46A1Q9Y6A2 500 aa15.7■□□□□ 0.1
SCAF1-203ENST00000598359 PTPRSQ13332 1948 aa15.7■□□□□ 0.1
SCAF1-203ENST00000598359 FAM86B1E9PN63 330 aa15.69■□□□□ 0.1
SCAF1-203ENST00000598359 DDX39AO00148 427 aaKnown RBP15.69■□□□□ 0.1
SCAF1-203ENST00000598359 DTNBO60941 627 aa15.69■□□□□ 0.1
SCAF1-203ENST00000598359 FAM86B2P0C5J1 330 aa15.69■□□□□ 0.1
SCAF1-203ENST00000598359 ZNF76P36508 570 aa15.69■□□□□ 0.1
SCAF1-203ENST00000598359 ADAM17P78536 824 aa15.69■□□□□ 0.1
SCAF1-203ENST00000598359 STK3Q13188 491 aa15.69■□□□□ 0.1
SCAF1-203ENST00000598359 AP3B2Q13367 1082 aa15.69■□□□□ 0.1
SCAF1-203ENST00000598359 FAM117BQ6P1L5 589 aa15.69■□□□□ 0.1
SCAF1-203ENST00000598359 DBF4BQ8NFT6 615 aa15.69■□□□□ 0.1
SCAF1-203ENST00000598359 PHOSPHO2Q8TCD6 241 aa15.69■□□□□ 0.1
SCAF1-203ENST00000598359 VPS54Q9P1Q0 977 aa15.69■□□□□ 0.1
SCAF1-203ENST00000598359 SLC9A2Q9UBY0 812 aa15.69■□□□□ 0.1
SCAF1-203ENST00000598359 LCHNA4D1U4 455 aa15.68■□□□□ 0.1
SCAF1-203ENST00000598359 EPOPA6NHQ4 379 aa15.68■□□□□ 0.1
SCAF1-203ENST00000598359 MEIS1O00470 390 aa15.68■□□□□ 0.1
SCAF1-203ENST00000598359 MAFGO15525 162 aa15.68■□□□□ 0.1
SCAF1-203ENST00000598359 TLL1O43897 1013 aa15.68■□□□□ 0.1
SCAF1-203ENST00000598359 LGR5O75473 907 aa15.68■□□□□ 0.1
SCAF1-203ENST00000598359 PARNO95453 639 aaKnown RBP15.68■□□□□ 0.1
SCAF1-203ENST00000598359 GNAT1P11488 350 aa15.68■□□□□ 0.1
SCAF1-203ENST00000598359 IFNAR1P17181 557 aa15.68■□□□□ 0.1
SCAF1-203ENST00000598359 HOXD11P31277 338 aaPredicted RBP15.68■□□□□ 0.1
SCAF1-203ENST00000598359 EVCP57679 992 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms