RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 MYADML2A6NDP7 307 aa13.69□□□□□ -0.22
SHKBP1-213ENST00000597325 M0R2N6 131 aa13.69□□□□□ -0.22
SHKBP1-213ENST00000597325 MEIS2O14770 477 aa13.69□□□□□ -0.22
SHKBP1-213ENST00000597325 IL9P15248 144 aa13.69□□□□□ -0.22
SHKBP1-213ENST00000597325 CST5P28325 142 aaPredicted RBP13.69□□□□□ -0.22
SHKBP1-213ENST00000597325 CLK2P49760 499 aaKnown RBP13.69□□□□□ -0.22
SHKBP1-213ENST00000597325 KRT85P78386 507 aa13.69□□□□□ -0.22
SHKBP1-213ENST00000597325 GRB10Q13322 594 aa13.69□□□□□ -0.22
SHKBP1-213ENST00000597325 LEXMQ3ZCV2 418 aa13.69□□□□□ -0.22
SHKBP1-213ENST00000597325 RILPL1Q5EBL4 403 aa13.69□□□□□ -0.22
SHKBP1-213ENST00000597325 MYSM1Q5VVJ2 828 aa13.69□□□□□ -0.22
SHKBP1-213ENST00000597325 FCHSD1Q86WN1 690 aa13.69□□□□□ -0.22
SHKBP1-213ENST00000597325 GLT1D1Q96MS3 346 aa13.69□□□□□ -0.22
SHKBP1-213ENST00000597325 GBP4Q96PP9 640 aa13.69□□□□□ -0.22
SHKBP1-213ENST00000597325 TINF2Q9BSI4 451 aa13.69□□□□□ -0.22
SHKBP1-213ENST00000597325 ANO3Q9BYT9 981 aa13.69□□□□□ -0.22
SHKBP1-213ENST00000597325 UBE2ZQ9H832 354 aaPredicted RBP13.69□□□□□ -0.22
SHKBP1-213ENST00000597325 TRAPPC10P48553 1259 aa13.68□□□□□ -0.22
SHKBP1-213ENST00000597325 RPS6P62753 249 aaKnown RBP13.68□□□□□ -0.22
SHKBP1-213ENST00000597325 IRX5P78411 483 aaPredicted RBP13.68□□□□□ -0.22
SHKBP1-213ENST00000597325 GHRHRQ02643 423 aa13.68□□□□□ -0.22
SHKBP1-213ENST00000597325 TAP1Q03518 808 aa13.68□□□□□ -0.22
SHKBP1-213ENST00000597325 KCTD2Q14681 263 aa13.68□□□□□ -0.22
SHKBP1-213ENST00000597325 ATL3Q6DD88 541 aa13.68□□□□□ -0.22
SHKBP1-213ENST00000597325 SLC30A10Q6XR72 485 aa13.68□□□□□ -0.22
SHKBP1-213ENST00000597325 ARNTL2Q8WYA1 636 aa13.68□□□□□ -0.22
SHKBP1-213ENST00000597325 PGBD1Q96JS3 809 aa13.68□□□□□ -0.22
SHKBP1-213ENST00000597325 MFSD14AQ96MC6 490 aa13.68□□□□□ -0.22
SHKBP1-213ENST00000597325 MMP19Q99542 508 aa13.68□□□□□ -0.22
SHKBP1-213ENST00000597325 CACNA1HO95180 2353 aa13.68□□□□□ -0.22
SHKBP1-213ENST00000597325 PTPRZ1P23471 2315 aaPredicted RBP13.68□□□□□ -0.22
SHKBP1-213ENST00000597325 EPG5Q9HCE0 2579 aa13.68□□□□□ -0.22
SHKBP1-213ENST00000597325 A0A0U1RQG5 324 aaPredicted RBP13.67□□□□□ -0.22
SHKBP1-213ENST00000597325 FAM205CA6NFA0 338 aa13.67□□□□□ -0.22
SHKBP1-213ENST00000597325 ADAMTS3O15072 1205 aa13.67□□□□□ -0.22
SHKBP1-213ENST00000597325 GFRA3O60609 400 aa13.67□□□□□ -0.22
SHKBP1-213ENST00000597325 FCER1AP12319 257 aa13.67□□□□□ -0.22
SHKBP1-213ENST00000597325 ATP2B1P20020 1258 aa13.67□□□□□ -0.22
SHKBP1-213ENST00000597325 PTPN5P54829 565 aa13.67□□□□□ -0.22
SHKBP1-213ENST00000597325 DNM1Q05193 864 aaKnown RBP13.67□□□□□ -0.22
SHKBP1-213ENST00000597325 BAATQ14032 418 aaPredicted RBP13.67□□□□□ -0.22
SHKBP1-213ENST00000597325 INF2Q27J81 1249 aa13.67□□□□□ -0.22
SHKBP1-213ENST00000597325 TTC38Q5R3I4 469 aa13.67□□□□□ -0.22
SHKBP1-213ENST00000597325 FAM173BQ6P4H8 233 aa13.67□□□□□ -0.22
SHKBP1-213ENST00000597325 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.67□□□□□ -0.22
SHKBP1-213ENST00000597325 ERMP1Q7Z2K6 904 aa13.67□□□□□ -0.22
SHKBP1-213ENST00000597325 NEK8Q86SG6 692 aa13.67□□□□□ -0.22
SHKBP1-213ENST00000597325 SYTL5Q8TDW5 730 aaPredicted RBP13.67□□□□□ -0.22
SHKBP1-213ENST00000597325 TBCKQ8TEA7 893 aa13.67□□□□□ -0.22
SHKBP1-213ENST00000597325 NAP1L4Q99733 375 aaKnown RBP13.67□□□□□ -0.22
SHKBP1-213ENST00000597325 WNT8AQ9H1J5 351 aa13.67□□□□□ -0.22
SHKBP1-213ENST00000597325 A1CFQ9NQ94 594 aaKnown RBP13.67□□□□□ -0.22
SHKBP1-213ENST00000597325 CYP39A1Q9NYL5 469 aa13.67□□□□□ -0.22
SHKBP1-213ENST00000597325 CFAP45Q9UL16 551 aa13.67□□□□□ -0.22
SHKBP1-213ENST00000597325 TECTAO75443 2155 aa13.66□□□□□ -0.22
SHKBP1-213ENST00000597325 FRYLO94915 3013 aa13.66□□□□□ -0.22
SHKBP1-213ENST00000597325 GRXCR2A6NFK2 248 aa13.66□□□□□ -0.22
SHKBP1-213ENST00000597325 TLR3O15455 904 aaKnown RBP13.66□□□□□ -0.22
SHKBP1-213ENST00000597325 ASGR1P07306 291 aa13.66□□□□□ -0.22
SHKBP1-213ENST00000597325 SREBF1P36956 1147 aa13.66□□□□□ -0.22
SHKBP1-213ENST00000597325 TCF15Q12870 199 aa13.66□□□□□ -0.22
SHKBP1-213ENST00000597325 EARS2Q5JPH6 523 aaKnown RBP13.66□□□□□ -0.22
SHKBP1-213ENST00000597325 IER5LQ5T953 404 aa13.66□□□□□ -0.22
SHKBP1-213ENST00000597325 SPRED2Q7Z698 418 aa13.66□□□□□ -0.22
SHKBP1-213ENST00000597325 TBC1D5Q92609 795 aa13.66□□□□□ -0.22
SHKBP1-213ENST00000597325 MPHOSPH6Q99547 160 aaKnown RBP13.66□□□□□ -0.22
SHKBP1-213ENST00000597325 HIPK3Q9H422 1215 aa13.66□□□□□ -0.22
SHKBP1-213ENST00000597325 LMCD1Q9NZU5 365 aa13.66□□□□□ -0.22
SHKBP1-213ENST00000597325 CEP131Q9UPN4 1083 aa13.66□□□□□ -0.22
SHKBP1-213ENST00000597325 GOLGA6L22H0YM25 854 aa13.65□□□□□ -0.22
SHKBP1-213ENST00000597325 BMP15O95972 392 aa13.65□□□□□ -0.22
SHKBP1-213ENST00000597325 CCL23P55773 120 aa13.65□□□□□ -0.22
SHKBP1-213ENST00000597325 ARHGAP4P98171 946 aa13.65□□□□□ -0.22
SHKBP1-213ENST00000597325 LETM2Q2VYF4 491 aa13.65□□□□□ -0.22
SHKBP1-213ENST00000597325 ZNF792Q3KQV3 632 aa13.65□□□□□ -0.22
SHKBP1-213ENST00000597325 ARHGEF16Q5VV41 709 aa13.65□□□□□ -0.22
SHKBP1-213ENST00000597325 SLC43A3Q8NBI5 491 aa13.65□□□□□ -0.22
SHKBP1-213ENST00000597325 NSUN6Q8TEA1 469 aaKnown RBP13.65□□□□□ -0.22
SHKBP1-213ENST00000597325 RMDN3Q96TC7 470 aa13.65□□□□□ -0.22
SHKBP1-213ENST00000597325 SCAND2PQ9GZW5 306 aaPredicted RBP13.65□□□□□ -0.22
SHKBP1-213ENST00000597325 ALG13Q9NP73 1137 aaKnown RBP13.65□□□□□ -0.22
SHKBP1-213ENST00000597325 COL20A1Q9P218 1284 aa13.65□□□□□ -0.22
SHKBP1-213ENST00000597325 DIS3Q9Y2L1 958 aaKnown RBP13.65□□□□□ -0.22
SHKBP1-213ENST00000597325 ZBBXA8MT70 800 aa13.64□□□□□ -0.23
SHKBP1-213ENST00000597325 B4DLN1 442 aa13.64□□□□□ -0.23
SHKBP1-213ENST00000597325 ADCY6O43306 1168 aa13.64□□□□□ -0.23
SHKBP1-213ENST00000597325 FIBPO43427 364 aa13.64□□□□□ -0.23
SHKBP1-213ENST00000597325 CCNT1O60563 726 aaKnown RBP13.64□□□□□ -0.23
SHKBP1-213ENST00000597325 DUSP11O75319 330 aaKnown RBP13.64□□□□□ -0.23
SHKBP1-213ENST00000597325 BAG4O95429 457 aaKnown RBP13.64□□□□□ -0.23
SHKBP1-213ENST00000597325 GCFC2P16383 781 aaKnown RBP13.64□□□□□ -0.23
SHKBP1-213ENST00000597325 EIF2AK2P19525 551 aaKnown RBP13.64□□□□□ -0.23
SHKBP1-213ENST00000597325 ZNF76P36508 570 aa13.64□□□□□ -0.23
SHKBP1-213ENST00000597325 CEBPZQ03701 1054 aaKnown RBP13.64□□□□□ -0.23
SHKBP1-213ENST00000597325 ORC2Q13416 577 aaPredicted RBP13.64□□□□□ -0.23
SHKBP1-213ENST00000597325 TTLL4Q14679 1199 aa13.64□□□□□ -0.23
SHKBP1-213ENST00000597325 STK38Q15208 465 aa13.64□□□□□ -0.23
SHKBP1-213ENST00000597325 PTCRAQ6ISU1 281 aaPredicted RBP13.64□□□□□ -0.23
SHKBP1-213ENST00000597325 DNERQ8NFT8 737 aa13.64□□□□□ -0.23
SHKBP1-213ENST00000597325 USP28Q96RU2 1077 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms