RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 MTMR9Q96QG7 549 aa16.21■□□□□ 0.19
VRK3-213ENST00000597215 SENP6Q9GZR1 1112 aaPredicted RBP16.21■□□□□ 0.19
VRK3-213ENST00000597215 TMEM60Q9H2L4 133 aa16.21■□□□□ 0.19
VRK3-213ENST00000597215 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.21■□□□□ 0.19
VRK3-213ENST00000597215 TELO2Q9Y4R8 837 aa16.21■□□□□ 0.19
VRK3-213ENST00000597215 SCN10AQ9Y5Y9 1956 aa16.2■□□□□ 0.18
VRK3-213ENST00000597215 GSTTP1A0A1W2PQM5 241 aa16.2■□□□□ 0.18
VRK3-213ENST00000597215 WDR64B1ANS9 1081 aa16.2■□□□□ 0.18
VRK3-213ENST00000597215 LAD1O00515 517 aa16.2■□□□□ 0.18
VRK3-213ENST00000597215 BRD1O95696 1058 aa16.2■□□□□ 0.18
VRK3-213ENST00000597215 CCNE2O96020 404 aa16.2■□□□□ 0.18
VRK3-213ENST00000597215 LGALS2P05162 132 aa16.2■□□□□ 0.18
VRK3-213ENST00000597215 ZNF286BP0CG31 522 aa16.2■□□□□ 0.18
VRK3-213ENST00000597215 SFNP31947 248 aa16.2■□□□□ 0.18
VRK3-213ENST00000597215 TCF7P36402 384 aaPredicted RBP16.2■□□□□ 0.18
VRK3-213ENST00000597215 JAK3P52333 1124 aa16.2■□□□□ 0.18
VRK3-213ENST00000597215 UTP14CQ5TAP6 766 aaKnown RBP16.2■□□□□ 0.18
VRK3-213ENST00000597215 FOXD4L5Q5VV16 416 aaPredicted RBP16.2■□□□□ 0.18
VRK3-213ENST00000597215 MIS18BP1Q6P0N0 1132 aa16.2■□□□□ 0.18
VRK3-213ENST00000597215 RDM1Q8NG50 284 aa16.2■□□□□ 0.18
VRK3-213ENST00000597215 FOXD4L4Q8WXT5 416 aaPredicted RBP16.2■□□□□ 0.18
VRK3-213ENST00000597215 VTI1AQ96AJ9 217 aa16.2■□□□□ 0.18
VRK3-213ENST00000597215 KATNAL1Q9BW62 490 aa16.2■□□□□ 0.18
VRK3-213ENST00000597215 UNC45AQ9H3U1 944 aa16.2■□□□□ 0.18
VRK3-213ENST00000597215 STARD7Q9NQZ5 370 aa16.2■□□□□ 0.18
VRK3-213ENST00000597215 MKI67P46013 3256 aaKnown RBP16.2■□□□□ 0.18
VRK3-213ENST00000597215 CHMP2AO43633 222 aa16.19■□□□□ 0.18
VRK3-213ENST00000597215 ATG7O95352 703 aa16.19■□□□□ 0.18
VRK3-213ENST00000597215 BMP15O95972 392 aa16.19■□□□□ 0.18
VRK3-213ENST00000597215 F2P00734 622 aa16.19■□□□□ 0.18
VRK3-213ENST00000597215 SUPT20HL2P0C7V6 817 aa16.19■□□□□ 0.18
VRK3-213ENST00000597215 TXKP42681 527 aa16.19■□□□□ 0.18
VRK3-213ENST00000597215 PTGDRQ13258 359 aa16.19■□□□□ 0.18
VRK3-213ENST00000597215 PPP2R5CQ13362 524 aa16.19■□□□□ 0.18
VRK3-213ENST00000597215 B3GNT9Q6UX72 402 aa16.19■□□□□ 0.18
VRK3-213ENST00000597215 ABHD15Q6UXT9 468 aa16.19■□□□□ 0.18
VRK3-213ENST00000597215 AZI2Q9H6S1 392 aa16.19■□□□□ 0.18
VRK3-213ENST00000597215 DISC1Q9NRI5 854 aa16.19■□□□□ 0.18
VRK3-213ENST00000597215 VAV3Q9UKW4 847 aa16.19■□□□□ 0.18
VRK3-213ENST00000597215 ZNF215Q9UL58 517 aaPredicted RBP16.19■□□□□ 0.18
VRK3-213ENST00000597215 PCDHA12Q9UN75 941 aa16.19■□□□□ 0.18
VRK3-213ENST00000597215 CEP131Q9UPN4 1083 aa16.19■□□□□ 0.18
VRK3-213ENST00000597215 SAMM50Q9Y512 469 aa16.19■□□□□ 0.18
VRK3-213ENST00000597215 PCDHA10Q9Y5I2 948 aa16.19■□□□□ 0.18
VRK3-213ENST00000597215 EMSYQ7Z589 1322 aa16.19■□□□□ 0.18
VRK3-213ENST00000597215 A0A0U1RQG5 324 aaPredicted RBP16.18■□□□□ 0.18
VRK3-213ENST00000597215 LGR5O75473 907 aa16.18■□□□□ 0.18
VRK3-213ENST00000597215 PSAPP07602 524 aa16.18■□□□□ 0.18
VRK3-213ENST00000597215 FAM160B1Q5W0V3 765 aa16.18■□□□□ 0.18
VRK3-213ENST00000597215 FAM173BQ6P4H8 233 aa16.18■□□□□ 0.18
VRK3-213ENST00000597215 MIER3Q7Z3K6 550 aa16.18■□□□□ 0.18
VRK3-213ENST00000597215 C4orf32Q8N8J7 132 aa16.18■□□□□ 0.18
VRK3-213ENST00000597215 KAT2BQ92831 832 aa16.18■□□□□ 0.18
VRK3-213ENST00000597215 GLG1Q92896 1179 aa16.18■□□□□ 0.18
VRK3-213ENST00000597215 C16orf70Q9BSU1 422 aa16.18■□□□□ 0.18
VRK3-213ENST00000597215 SMARCAD1Q9H4L7 1026 aa16.18■□□□□ 0.18
VRK3-213ENST00000597215 TTC12Q9H892 705 aaPredicted RBP16.18■□□□□ 0.18
VRK3-213ENST00000597215 MYH9P35579 1960 aaKnown RBP16.17■□□□□ 0.18
VRK3-213ENST00000597215 IGKV6D-21A0A0A0MT36 114 aa16.17■□□□□ 0.18
VRK3-213ENST00000597215 H3BRB1 525 aa16.17■□□□□ 0.18
VRK3-213ENST00000597215 BACH1O14867 736 aa16.17■□□□□ 0.18
VRK3-213ENST00000597215 DDIT3P35638 169 aa16.17■□□□□ 0.18
VRK3-213ENST00000597215 PRPHP41219 470 aa16.17■□□□□ 0.18
VRK3-213ENST00000597215 PSEN2P49810 448 aa16.17■□□□□ 0.18
VRK3-213ENST00000597215 PSMC6P62333 389 aa16.17■□□□□ 0.18
VRK3-213ENST00000597215 NUCB2P80303 420 aa16.17■□□□□ 0.18
VRK3-213ENST00000597215 ATP2C1P98194 919 aaPredicted RBP16.17■□□□□ 0.18
VRK3-213ENST00000597215 SPIRE1Q08AE8 756 aa16.17■□□□□ 0.18
VRK3-213ENST00000597215 ITGA7Q13683 1181 aa16.17■□□□□ 0.18
VRK3-213ENST00000597215 MFSD10Q14728 455 aa16.17■□□□□ 0.18
VRK3-213ENST00000597215 TMEM266Q2M3C6 531 aa16.17■□□□□ 0.18
VRK3-213ENST00000597215 NCAPH2Q6IBW4 605 aa16.17■□□□□ 0.18
VRK3-213ENST00000597215 SLC39A5Q6ZMH5 540 aa16.17■□□□□ 0.18
VRK3-213ENST00000597215 TRIM50Q86XT4 487 aa16.17■□□□□ 0.18
VRK3-213ENST00000597215 ZNF396Q96N95 335 aaPredicted RBP16.17■□□□□ 0.18
VRK3-213ENST00000597215 SEZ6LQ9BYH1 1024 aa16.17■□□□□ 0.18
VRK3-213ENST00000597215 TUT1Q9H6E5 874 aaKnown RBP16.17■□□□□ 0.18
VRK3-213ENST00000597215 WDR81Q562E7 1941 aa16.17■□□□□ 0.18
VRK3-213ENST00000597215 ARVCFO00192 962 aa16.16■□□□□ 0.18
VRK3-213ENST00000597215 HAS3O00219 553 aa16.16■□□□□ 0.18
VRK3-213ENST00000597215 SLC26A2P50443 739 aa16.16■□□□□ 0.18
VRK3-213ENST00000597215 STAT5BP51692 787 aa16.16■□□□□ 0.18
VRK3-213ENST00000597215 ATN1P54259 1190 aaPredicted RBP16.16■□□□□ 0.18
VRK3-213ENST00000597215 CHMP4BP1P59074 171 aa16.16■□□□□ 0.18
VRK3-213ENST00000597215 SF3A1Q15459 793 aaKnown RBP16.16■□□□□ 0.18
VRK3-213ENST00000597215 KIAA0753Q2KHM9 967 aa16.16■□□□□ 0.18
VRK3-213ENST00000597215 NBPF20Q3BBV1 942 aa16.16■□□□□ 0.18
VRK3-213ENST00000597215 ARL6IP4Q66PJ3 421 aaKnown RBP16.16■□□□□ 0.18
VRK3-213ENST00000597215 NFRKBQ6P4R8 1299 aa16.16■□□□□ 0.18
VRK3-213ENST00000597215 PLPPR4Q7Z2D5 763 aa16.16■□□□□ 0.18
VRK3-213ENST00000597215 CCDC60Q8IWA6 550 aaPredicted RBP16.16■□□□□ 0.18
VRK3-213ENST00000597215 AFAP1L1Q8TED9 768 aa16.16■□□□□ 0.18
VRK3-213ENST00000597215 PCYT2Q99447 389 aa16.16■□□□□ 0.18
VRK3-213ENST00000597215 HTATIP2Q9BUP3 242 aa16.16■□□□□ 0.18
VRK3-213ENST00000597215 RAB34Q9BZG1 259 aa16.16■□□□□ 0.18
VRK3-213ENST00000597215 ZNF302Q9NR11 478 aa16.16■□□□□ 0.18
VRK3-213ENST00000597215 ERAP1Q9NZ08 941 aa16.16■□□□□ 0.18
VRK3-213ENST00000597215 DNAH12Q6ZR08 3092 aa16.16■□□□□ 0.18
VRK3-213ENST00000597215 EML1O00423 815 aa16.15■□□□□ 0.18
VRK3-213ENST00000597215 TECP42680 631 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms