RNA–Protein interactions for RNA: ENST00000595993.5

USHBP1-205, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-205ENST00000595993 EIF5BO60841 1220 aaKnown RBP18.33■□□□□ 0.52
USHBP1-205ENST00000595993 GGPS1O95749 300 aa18.33■□□□□ 0.52
USHBP1-205ENST00000595993 UBA1P22314 1058 aaKnown RBP18.33■□□□□ 0.52
USHBP1-205ENST00000595993 RCAN1P53805 252 aa18.33■□□□□ 0.52
USHBP1-205ENST00000595993 EVCP57679 992 aa18.33■□□□□ 0.52
USHBP1-205ENST00000595993 HTRA4P83105 476 aaPredicted RBP18.33■□□□□ 0.52
USHBP1-205ENST00000595993 FUT2Q10981 343 aa18.33■□□□□ 0.52
USHBP1-205ENST00000595993 RRP36Q96EU6 259 aaKnown RBP18.33■□□□□ 0.52
USHBP1-205ENST00000595993 LARP6Q9BRS8 491 aaKnown RBP18.33■□□□□ 0.52
USHBP1-205ENST00000595993 EPHX3Q9H6B9 360 aa18.33■□□□□ 0.52
USHBP1-205ENST00000595993 PDRG1Q9NUG6 133 aa18.33■□□□□ 0.52
USHBP1-205ENST00000595993 RBM28Q9NW13 759 aaKnown RBP18.33■□□□□ 0.52
USHBP1-205ENST00000595993 PCDHA1Q9Y5I3 950 aa18.33■□□□□ 0.52
USHBP1-205ENST00000595993 METAP2P50579 478 aaKnown RBP eCLIP18.32■□□□□ 0.52
USHBP1-205ENST00000595993 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.32■□□□□ 0.52
USHBP1-205ENST00000595993 SPATA33Q96N06 139 aa18.32■□□□□ 0.52
USHBP1-205ENST00000595993 INSL6Q9Y581 213 aa18.32■□□□□ 0.52
USHBP1-205ENST00000595993 RBAK-RBAKDNI3L0D1 243 aa18.31■□□□□ 0.52
USHBP1-205ENST00000595993 MYCLP12524 364 aaPredicted RBP18.31■□□□□ 0.52
USHBP1-205ENST00000595993 PDIA3P30101 505 aaKnown RBP18.31■□□□□ 0.52
USHBP1-205ENST00000595993 HOXA13P31271 388 aaPredicted RBP18.31■□□□□ 0.52
USHBP1-205ENST00000595993 ADD1P35611 737 aaKnown RBP18.31■□□□□ 0.52
USHBP1-205ENST00000595993 TRAF1Q13077 416 aa18.31■□□□□ 0.52
USHBP1-205ENST00000595993 PLEKHG4Q58EX7 1191 aa18.31■□□□□ 0.52
USHBP1-205ENST00000595993 DBF4BQ8NFT6 615 aa18.31■□□□□ 0.52
USHBP1-205ENST00000595993 GPKOWQ92917 476 aaPredicted RBP eCLIP18.31■□□□□ 0.52
USHBP1-205ENST00000595993 KHSRPQ92945 711 aaKnown RBP eCLIP18.31■□□□□ 0.52
USHBP1-205ENST00000595993 LRFN3Q9BTN0 628 aa18.31■□□□□ 0.52
USHBP1-205ENST00000595993 RSPH10B2B2RC85 870 aa18.3■□□□□ 0.52
USHBP1-205ENST00000595993 H3BRB1 525 aa18.3■□□□□ 0.52
USHBP1-205ENST00000595993 CAND2O75155 1236 aa18.3■□□□□ 0.52
USHBP1-205ENST00000595993 RSPH10BP0C881 870 aa18.3■□□□□ 0.52
USHBP1-205ENST00000595993 CCND2P30279 289 aa18.3■□□□□ 0.52
USHBP1-205ENST00000595993 ICAM3P32942 547 aa18.3■□□□□ 0.52
USHBP1-205ENST00000595993 INPP4AQ96PE3 977 aaPredicted RBP18.3■□□□□ 0.52
USHBP1-205ENST00000595993 TUT1Q9H6E5 874 aaKnown RBP18.3■□□□□ 0.52
USHBP1-205ENST00000595993 UBE2ZQ9H832 354 aaPredicted RBP18.3■□□□□ 0.52
USHBP1-205ENST00000595993 C11orf16Q9NQ32 467 aa18.3■□□□□ 0.52
USHBP1-205ENST00000595993 SEC63Q9UGP8 760 aaKnown RBP18.3■□□□□ 0.52
USHBP1-205ENST00000595993 GCOM1H8Y6P7 765 aaPredicted RBP18.29■□□□□ 0.52
USHBP1-205ENST00000595993 POLR2MP0CAP2 368 aa18.29■□□□□ 0.52
USHBP1-205ENST00000595993 MRPS9P82933 396 aaKnown RBP18.29■□□□□ 0.52
USHBP1-205ENST00000595993 LEXMQ3ZCV2 418 aa18.29■□□□□ 0.52
USHBP1-205ENST00000595993 C17orf80Q9BSJ5 609 aa18.29■□□□□ 0.52
USHBP1-205ENST00000595993 BCAS3Q9H6U6 928 aa18.29■□□□□ 0.52
USHBP1-205ENST00000595993 NCOA5Q9HCD5 579 aaKnown RBP18.29■□□□□ 0.52
USHBP1-205ENST00000595993 CD320Q9NPF0 282 aa18.29■□□□□ 0.52
USHBP1-205ENST00000595993 MTUS1Q9ULD2 1270 aa18.29■□□□□ 0.52
USHBP1-205ENST00000595993 C17orf102A2RUQ5 167 aa18.28■□□□□ 0.52
USHBP1-205ENST00000595993 GPR37L1O60883 481 aa18.28■□□□□ 0.52
USHBP1-205ENST00000595993 STAM2O75886 525 aa18.28■□□□□ 0.52
USHBP1-205ENST00000595993 AMHP03971 560 aa18.28■□□□□ 0.52
USHBP1-205ENST00000595993 LGALS2P05162 132 aa18.28■□□□□ 0.52
USHBP1-205ENST00000595993 SMIM10L2AP0DMW4 78 aa18.28■□□□□ 0.52
USHBP1-205ENST00000595993 SMIM10L2BP0DMW5 78 aa18.28■□□□□ 0.52
USHBP1-205ENST00000595993 THPOP40225 353 aa18.28■□□□□ 0.52
USHBP1-205ENST00000595993 AK2P54819 239 aa18.28■□□□□ 0.52
USHBP1-205ENST00000595993 CCT2P78371 535 aaKnown RBP18.28■□□□□ 0.52
USHBP1-205ENST00000595993 ADAM17P78536 824 aa18.28■□□□□ 0.52
USHBP1-205ENST00000595993 SEMA3FQ13275 785 aa18.28■□□□□ 0.52
USHBP1-205ENST00000595993 ATP6V0A1Q93050 837 aa18.28■□□□□ 0.52
USHBP1-205ENST00000595993 FAM122AQ96E09 287 aa18.28■□□□□ 0.52
USHBP1-205ENST00000595993 KIF2CQ99661 725 aa18.28■□□□□ 0.52
USHBP1-205ENST00000595993 RNPEPQ9H4A4 650 aa18.28■□□□□ 0.52
USHBP1-205ENST00000595993 MLXIPQ9HAP2 919 aa18.28■□□□□ 0.52
USHBP1-205ENST00000595993 RALGAPA2Q2PPJ7 1873 aa18.28■□□□□ 0.52
USHBP1-205ENST00000595993 NLRC5Q86WI3 1866 aa18.27■□□□□ 0.52
USHBP1-205ENST00000595993 DOCK5Q9H7D0 1870 aa18.27■□□□□ 0.52
USHBP1-205ENST00000595993 SPATA31C2B4DYI2 1134 aa18.27■□□□□ 0.52
USHBP1-205ENST00000595993 PI4K2BG5E9Z4 385 aa18.27■□□□□ 0.52
USHBP1-205ENST00000595993 TREHO43280 583 aa18.27■□□□□ 0.52
USHBP1-205ENST00000595993 SORBS3O60504 671 aa18.27■□□□□ 0.52
USHBP1-205ENST00000595993 COL19A1Q14993 1142 aa18.27■□□□□ 0.52
USHBP1-205ENST00000595993 NTRK3Q16288 839 aa18.27■□□□□ 0.52
USHBP1-205ENST00000595993 WWC2Q6AWC2 1192 aa18.27■□□□□ 0.52
USHBP1-205ENST00000595993 FAM117BQ6P1L5 589 aa18.27■□□□□ 0.52
USHBP1-205ENST00000595993 METTL7BQ6UX53 244 aa18.27■□□□□ 0.52
USHBP1-205ENST00000595993 FBXO22Q8NEZ5 403 aa18.27■□□□□ 0.52
USHBP1-205ENST00000595993 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.27■□□□□ 0.52
USHBP1-205ENST00000595993 TOP1MTQ969P6 601 aa18.27■□□□□ 0.52
USHBP1-205ENST00000595993 SAMD11Q96NU1 681 aa18.27■□□□□ 0.52
USHBP1-205ENST00000595993 OSBPL7Q9BZF2 842 aa18.27■□□□□ 0.52
USHBP1-205ENST00000595993 TPCN1Q9ULQ1 816 aa18.27■□□□□ 0.52
USHBP1-205ENST00000595993 V9GY48 417 aaPredicted RBP18.27■□□□□ 0.52
USHBP1-205ENST00000595993 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.26■□□□□ 0.51
USHBP1-205ENST00000595993 HOXD11P31277 338 aaPredicted RBP18.26■□□□□ 0.51
USHBP1-205ENST00000595993 STK3Q13188 491 aa18.26■□□□□ 0.51
USHBP1-205ENST00000595993 GNPTABQ3T906 1256 aa18.26■□□□□ 0.51
USHBP1-205ENST00000595993 TMEM31Q5JXX7 168 aa18.26■□□□□ 0.51
USHBP1-205ENST00000595993 TYW1BQ6NUM6 668 aa18.26■□□□□ 0.51
USHBP1-205ENST00000595993 FAM178BQ8IXR5 827 aa18.26■□□□□ 0.51
USHBP1-205ENST00000595993 MYOCDQ8IZQ8 938 aa18.26■□□□□ 0.51
USHBP1-205ENST00000595993 MRPL38Q96DV4 380 aaKnown RBP18.26■□□□□ 0.51
USHBP1-205ENST00000595993 ZNF274Q96GC6 653 aaPredicted RBP18.26■□□□□ 0.51
USHBP1-205ENST00000595993 ZFP91Q96JP5 570 aaPredicted RBP18.26■□□□□ 0.51
USHBP1-205ENST00000595993 GPR20Q99678 358 aa18.26■□□□□ 0.51
USHBP1-205ENST00000595993 C22orf23Q9BZE7 217 aa18.26■□□□□ 0.51
USHBP1-205ENST00000595993 CCDC196A0A1B0GTZ2 297 aa18.25■□□□□ 0.51
USHBP1-205ENST00000595993 PPFIA3O75145 1194 aa18.25■□□□□ 0.51
USHBP1-205ENST00000595993 RBM25P49756 843 aaKnown RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms