RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 ETNPPLQ8TBG4 499 aa16.24■□□□□ 0.19
LIG1-208ENST00000595758 GJA10Q969M2 543 aa16.24■□□□□ 0.19
LIG1-208ENST00000595758 FAM20AQ96MK3 541 aa16.24■□□□□ 0.19
LIG1-208ENST00000595758 TOX2Q96NM4 488 aa16.24■□□□□ 0.19
LIG1-208ENST00000595758 TEKT3Q9BXF9 490 aa16.24■□□□□ 0.19
LIG1-208ENST00000595758 TUT1Q9H6E5 874 aaKnown RBP16.24■□□□□ 0.19
LIG1-208ENST00000595758 NOL7Q9UMY1 257 aaKnown RBP16.24■□□□□ 0.19
LIG1-208ENST00000595758 DOCK5Q9H7D0 1870 aa16.24■□□□□ 0.19
LIG1-208ENST00000595758 MROH7Q68CQ1 1323 aa16.23■□□□□ 0.19
LIG1-208ENST00000595758 VPS37CA5D8V6 355 aaPredicted RBP16.23■□□□□ 0.19
LIG1-208ENST00000595758 DCDC2CA8MYV0 355 aa16.23■□□□□ 0.19
LIG1-208ENST00000595758 HAS3O00219 553 aa16.23■□□□□ 0.19
LIG1-208ENST00000595758 WNT7AO00755 349 aa16.23■□□□□ 0.19
LIG1-208ENST00000595758 SYT1P21579 422 aa16.23■□□□□ 0.19
LIG1-208ENST00000595758 TRAPPC10P48553 1259 aa16.23■□□□□ 0.19
LIG1-208ENST00000595758 KIAA0753Q2KHM9 967 aa16.23■□□□□ 0.19
LIG1-208ENST00000595758 FAM47CQ5HY64 1035 aa16.23■□□□□ 0.19
LIG1-208ENST00000595758 NFRKBQ6P4R8 1299 aa16.23■□□□□ 0.19
LIG1-208ENST00000595758 TRIM50Q86XT4 487 aa16.23■□□□□ 0.19
LIG1-208ENST00000595758 POTEDQ86YR6 584 aa16.23■□□□□ 0.19
LIG1-208ENST00000595758 GLG1Q92896 1179 aa16.23■□□□□ 0.19
LIG1-208ENST00000595758 KCNMB3Q9NPA1 279 aa16.23■□□□□ 0.19
LIG1-208ENST00000595758 ZNF215Q9UL58 517 aaPredicted RBP16.23■□□□□ 0.19
LIG1-208ENST00000595758 MKI67P46013 3256 aaKnown RBP16.22■□□□□ 0.19
LIG1-208ENST00000595758 TBX3O15119 743 aa16.22■□□□□ 0.19
LIG1-208ENST00000595758 LGR5O75473 907 aa16.22■□□□□ 0.19
LIG1-208ENST00000595758 PSMD10O75832 226 aa16.22■□□□□ 0.19
LIG1-208ENST00000595758 ATG7O95352 703 aa16.22■□□□□ 0.19
LIG1-208ENST00000595758 BAG4O95429 457 aaKnown RBP16.22■□□□□ 0.19
LIG1-208ENST00000595758 MCM7P33993 719 aa16.22■□□□□ 0.19
LIG1-208ENST00000595758 PTPN11Q06124 597 aaPredicted RBP16.22■□□□□ 0.19
LIG1-208ENST00000595758 ZNF174Q15697 407 aa16.22■□□□□ 0.19
LIG1-208ENST00000595758 CALCRLQ16602 461 aa16.22■□□□□ 0.19
LIG1-208ENST00000595758 TTC38Q5R3I4 469 aa16.22■□□□□ 0.19
LIG1-208ENST00000595758 MIS18BP1Q6P0N0 1132 aa16.22■□□□□ 0.19
LIG1-208ENST00000595758 ABHD15Q6UXT9 468 aa16.22■□□□□ 0.19
LIG1-208ENST00000595758 SMAP1Q8IYB5 467 aaPredicted RBP16.22■□□□□ 0.19
LIG1-208ENST00000595758 C7orf31Q8N865 590 aa16.22■□□□□ 0.19
LIG1-208ENST00000595758 PPP1R13LQ8WUF5 828 aa16.22■□□□□ 0.19
LIG1-208ENST00000595758 HAS1Q92839 578 aa16.22■□□□□ 0.19
LIG1-208ENST00000595758 SMARCAD1Q9H4L7 1026 aa16.22■□□□□ 0.19
LIG1-208ENST00000595758 AZI2Q9H6S1 392 aa16.22■□□□□ 0.19
LIG1-208ENST00000595758 SCN10AQ9Y5Y9 1956 aa16.22■□□□□ 0.19
LIG1-208ENST00000595758 WDR64B1ANS9 1081 aa16.21■□□□□ 0.19
LIG1-208ENST00000595758 BACH1O14867 736 aa16.21■□□□□ 0.19
LIG1-208ENST00000595758 TLR3O15455 904 aaKnown RBP16.21■□□□□ 0.19
LIG1-208ENST00000595758 CHMP2AO43633 222 aa16.21■□□□□ 0.19
LIG1-208ENST00000595758 NEMFO60524 1076 aa16.21■□□□□ 0.19
LIG1-208ENST00000595758 PSAPP07602 524 aa16.21■□□□□ 0.19
LIG1-208ENST00000595758 SUPT20HL2P0C7V6 817 aa16.21■□□□□ 0.19
LIG1-208ENST00000595758 ORC2Q13416 577 aaPredicted RBP16.21■□□□□ 0.19
LIG1-208ENST00000595758 BECN1Q14457 450 aa16.21■□□□□ 0.19
LIG1-208ENST00000595758 FAM126BQ8IXS8 530 aa16.21■□□□□ 0.19
LIG1-208ENST00000595758 SLFN12Q8IYM2 578 aa16.21■□□□□ 0.19
LIG1-208ENST00000595758 SPRYD3Q8NCJ5 442 aa16.21■□□□□ 0.19
LIG1-208ENST00000595758 PCYT2Q99447 389 aa16.21■□□□□ 0.19
LIG1-208ENST00000595758 TRPV6Q9H1D0 765 aa16.21■□□□□ 0.19
LIG1-208ENST00000595758 UNC45AQ9H3U1 944 aa16.21■□□□□ 0.19
LIG1-208ENST00000595758 ERAP1Q9NZ08 941 aa16.21■□□□□ 0.19
LIG1-208ENST00000595758 SAMM50Q9Y512 469 aa16.21■□□□□ 0.19
LIG1-208ENST00000595758 PCDHA10Q9Y5I2 948 aa16.21■□□□□ 0.19
LIG1-208ENST00000595758 EMSYQ7Z589 1322 aa16.2■□□□□ 0.18
LIG1-208ENST00000595758 ALPK3Q96L96 1907 aa16.2■□□□□ 0.18
LIG1-208ENST00000595758 CLTBP09497 229 aa16.2■□□□□ 0.18
LIG1-208ENST00000595758 SFNP31947 248 aa16.2■□□□□ 0.18
LIG1-208ENST00000595758 TOB1P50616 345 aaPredicted RBP16.2■□□□□ 0.18
LIG1-208ENST00000595758 STAT5BP51692 787 aa16.2■□□□□ 0.18
LIG1-208ENST00000595758 JAK3P52333 1124 aa16.2■□□□□ 0.18
LIG1-208ENST00000595758 FAAP100Q0VG06 881 aa16.2■□□□□ 0.18
LIG1-208ENST00000595758 FAM160B1Q5W0V3 765 aa16.2■□□□□ 0.18
LIG1-208ENST00000595758 SWSAP1Q6NVH7 229 aa16.2■□□□□ 0.18
LIG1-208ENST00000595758 PLPPR4Q7Z2D5 763 aa16.2■□□□□ 0.18
LIG1-208ENST00000595758 SESTD1Q86VW0 696 aa16.2■□□□□ 0.18
LIG1-208ENST00000595758 PRDM5Q9NQX1 630 aaPredicted RBP16.2■□□□□ 0.18
LIG1-208ENST00000595758 DISC1Q9NRI5 854 aa16.2■□□□□ 0.18
LIG1-208ENST00000595758 TRMT13Q9NUP7 481 aaKnown RBP16.2■□□□□ 0.18
LIG1-208ENST00000595758 HDAC6Q9UBN7 1215 aa16.2■□□□□ 0.18
LIG1-208ENST00000595758 PRKAG2Q9UGJ0 569 aa16.2■□□□□ 0.18
LIG1-208ENST00000595758 ZMYND8Q9ULU4 1186 aaPredicted RBP16.2■□□□□ 0.18
LIG1-208ENST00000595758 CEP290O15078 2479 aa16.2■□□□□ 0.18
LIG1-208ENST00000595758 IGKV6D-21A0A0A0MT36 114 aa16.19■□□□□ 0.18
LIG1-208ENST00000595758 H0YGN5 161 aa16.19■□□□□ 0.18
LIG1-208ENST00000595758 STX6O43752 255 aa16.19■□□□□ 0.18
LIG1-208ENST00000595758 CD4P01730 458 aa16.19■□□□□ 0.18
LIG1-208ENST00000595758 SMIM10L2AP0DMW4 78 aa16.19■□□□□ 0.18
LIG1-208ENST00000595758 SMIM10L2BP0DMW5 78 aa16.19■□□□□ 0.18
LIG1-208ENST00000595758 MARK3P27448 753 aa16.19■□□□□ 0.18
LIG1-208ENST00000595758 NBR1Q14596 966 aa16.19■□□□□ 0.18
LIG1-208ENST00000595758 RILPL1Q5EBL4 403 aa16.19■□□□□ 0.18
LIG1-208ENST00000595758 B3GNT9Q6UX72 402 aa16.19■□□□□ 0.18
LIG1-208ENST00000595758 MIER3Q7Z3K6 550 aa16.19■□□□□ 0.18
LIG1-208ENST00000595758 BRAPQ7Z569 592 aa16.19■□□□□ 0.18
LIG1-208ENST00000595758 FERMT3Q86UX7 667 aa16.19■□□□□ 0.18
LIG1-208ENST00000595758 RDM1Q8NG50 284 aa16.19■□□□□ 0.18
LIG1-208ENST00000595758 MTMR9Q96QG7 549 aa16.19■□□□□ 0.18
LIG1-208ENST00000595758 TMEM60Q9H2L4 133 aa16.19■□□□□ 0.18
LIG1-208ENST00000595758 RNPEPQ9H4A4 650 aa16.19■□□□□ 0.18
LIG1-208ENST00000595758 ZNF302Q9NR11 478 aa16.19■□□□□ 0.18
LIG1-208ENST00000595758 PDLIM7Q9NR12 457 aa16.19■□□□□ 0.18
LIG1-208ENST00000595758 TMEM39AQ9NV64 488 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms